MELO3C010138 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAGTTCGTCACGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAACTTGTTGAGTGCTTGGTGGAATTGGTTTCAGCTGGGGGATGGAGGTTCGATAATGGGACATTTCGATTTGGGTACCTGGCCCAATTGCAATGAATGATGGTAGAGAAGTTGCCCGACACTAATATCCAAGGATCGCCGACAATAGATTGTCGTGTGAAATCTCTTTAAAAAACCTACCAAGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGACTTTAGATGGAATGAAGAATTCCATTGCATCATCGCATAACGAGATTTGTTTGATAGTTGGGTAAAGGTATTAATTTCATAATACAATTGTACATACTTTTTATAATCACAATCGTCAACTAATCTGTCTAAATTACGTTTCTACAGAGTCATCCTGCAGCCAAAGACCTTCTATACAAATCATTTCCATATTATGATGATTTGTCCTATGTCTTCGACAAAGATCAAAGATCGGGTAACAAAAGCGCGTTCAGAGACCTTTGCTGATATAGGATCTAATGTCCCAAACATGTTTAATGACGACGTTCCACTCGGTGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGAGCATATGTCACCAGATGAGATCTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAAAAATGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTGAACATTCTGAAACAGTAGAGATGATGAGGAGTGCATTAGAATTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCTAAAAGAGAAGCGTGCAATAGAGGTCGAATGACATGCTGAAGTTGTGAAACAGCTACAAGATATCCTTGAAATACAAAGTCGAGATAGGCAAAGGTTATGCAAATCCTATTTCGTAGTGTGGAGGCTATTGAAGGATTCTTGTCGATTCCAACATAACTTAAATTTGAGTATTGCAATATTCTCTTGTAAAATTAGGGTTTGA ATGGTAAGTTCGTCACGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAACTTGTTGAGTGCTTGGTGGAATTGGTTTCAGCTGGGGGATGGAGGTTCGATAATGGGACATTTCGATTTGGGTACCTGGCCCAATTGCAATGAATGATGGTAGAGAAGTTGCCCGACACTAATATCCAAGGATCGCCGACAATAGATTGTCGTGTGAAATCTCTTTAAAAAACCTACCAAGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGACTTTAGATGGAATGAAGAATTCCATTGCATCATCGCATAACGAGATTTGTTTGATAGTTGGGTAAAGAGTCATCCTGCAGCCAAAGACCTTCTATACAAATCATTTCCATATTATGATGATTTGTCCTATGTCTTCGACAAAGATCAAAGATCGGGTAACAAAAGCGCGTTCAGAGACCTTTGCTGATATAGGATCTAATGTCCCAAACATGTTTAATGACGACGTTCCACTCGGTGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGAGCATATGTCACCAGATGAGATCTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAAAAATGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTGAACATTCTGAAACAGTAGAGATGATGAGGAGTGCATTAGAATTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCTAAAAGAGAAGCGTGCAATAGAGGTCGAATGACATGCTGAAGTTGTGAAACAGCTACAAGATATCCTTGAAATACAAAGTCGAGATAGGCAAAGGTTATGCAAATCCTATTTCGTAGTGTGGAGGCTATTGAAGGATTCTTGTCGATTCCAACATAACTTAAATTTGAGTATTGCAATATTCTCTTGTAAAATTAGGGTTTGA ATGATGATTTGTCCTATGTCTTCGACAAAGATCAAAGATCGGGTAACAAAAGCGCGTTCAGAGACCTTTGCTGATATAGGATCTAATGTCCCAAACATGTTTAATGACGACGTTCCACTCGGTGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGAGCATATGTCACCAGATGAGATCTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAAAAATGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTGAACATTCTGAAACAGTAGAGATGATGAGGAGTGCATTAGAATTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCTAAAAGAGAAGCGTGCAATAGAGGTCGAATGA MMICPMSSTKIKDRVTKARSETFADIGSNVPNMFNDDVPLGDSHDQDIPMMYSQGEHMSPDEIFGIRAGQASERKKCSSGSKRKRGSEHSETVEMMRSALEFGNDQLKAIANWLKEKRAIEVE Homology
BLAST of MELO3C010138 vs. NCBI nr
Match: KAA0035181.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 243.8 bits (621), Expect = 7.7e-61 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MELO3C010138 vs. NCBI nr
Match: TYK21967.1 (RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of MELO3C010138 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45 Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of MELO3C010138 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40 Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of MELO3C010138 vs. NCBI nr
Match: KAA0056515.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK12085.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 4.4e-40 Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of MELO3C010138 vs. ExPASy TrEMBL
Match: A0A5A7T0R2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002830 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MELO3C010138 vs. ExPASy TrEMBL
Match: A0A5D3DE65 (RING-H2 finger protein ATL66 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00130 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51 Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of MELO3C010138 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.8e-46 Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of MELO3C010138 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.5e-41 Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of MELO3C010138 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.5e-41 Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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