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MELO3C010016 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGAAAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTCTTGCAGCAGTAAAAAATCTATTGTGGCAAGCGAGATGGCAAGTACCAGAAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAA AGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGAAAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTCTTGCAGCAGTAAAAAATCTATTGTGGCAAGCGAGATGGCAAGTACCAGAAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAA ATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGAAAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTCTTGCAGCAGTAAAAAATCTATTGTGGCAAGCGAGATGGCAAGTACCAGAAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAA MEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKNLLWQARWQVPEVLLDRPLEIPKAV Homology
BLAST of MELO3C010016 vs. NCBI nr
Match: KAA0038198.1 (transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]) HSP 1 Score: 268.1 bits (684), Expect = 4.1e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. NCBI nr
Match: TYK14797.1 (transcription initiation factor TFIID subunit 12-like [Cucumis melo var. makuwa]) HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. NCBI nr
Match: KAA0038867.1 (transcription initiation factor TFIID subunit 12-like [Cucumis melo var. makuwa]) HSP 1 Score: 261.2 bits (666), Expect = 5.0e-66 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of MELO3C010016 vs. NCBI nr
Match: KAA0025267.1 (transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]) HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. NCBI nr
Match: XP_008462670.1 (PREDICTED: transcription initiation factor TFIID subunit 12 [Cucumis melo]) HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy Swiss-Prot
Match: Q9SR71 (Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702 GN=TAF12 PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 2.4e-39 Identity = 78/101 (77.23%), Postives = 88/101 (87.13%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy Swiss-Prot
Match: Q91858 (Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis OX=8355 GN=taf12 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 4.7e-27 Identity = 48/102 (47.06%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy Swiss-Prot
Match: Q3T174 (Transcription initiation factor TFIID subunit 12 OS=Bos taurus OX=9913 GN=TAF12 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.2e-27 Identity = 47/102 (46.08%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy Swiss-Prot
Match: Q16514 (Transcription initiation factor TFIID subunit 12 OS=Homo sapiens OX=9606 GN=TAF12 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.2e-27 Identity = 47/102 (46.08%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy Swiss-Prot
Match: Q8VE65 (Transcription initiation factor TFIID subunit 12 OS=Mus musculus OX=10090 GN=Taf12 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.2e-27 Identity = 47/102 (46.08%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy TrEMBL
Match: A0A5A7T5R6 (Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00320 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.0e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy TrEMBL
Match: A0A5D3CS91 (Transcription initiation factor TFIID subunit 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00400 PE=3 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 7.5e-68 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy TrEMBL
Match: A0A5A7TBA5 (Transcription initiation factor TFIID subunit 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00190 PE=3 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy TrEMBL
Match: A0A5A7SKM4 (Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001190 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.8e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. ExPASy TrEMBL
Match: A0A1S3CHH3 (transcription initiation factor TFIID subunit 12 OS=Cucumis melo OX=3656 GN=LOC103500973 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.8e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MELO3C010016 vs. TAIR 10
Match: AT3G10070.1 (TBP-associated factor 12 ) HSP 1 Score: 162.9 bits (411), Expect = 1.7e-40 Identity = 78/101 (77.23%), Postives = 88/101 (87.13%), Query Frame = 0
BLAST of MELO3C010016 vs. TAIR 10
Match: AT1G17440.1 (Transcription initiation factor TFIID subunit A ) HSP 1 Score: 121.3 bits (303), Expect = 5.7e-28 Identity = 58/108 (53.70%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of MELO3C010016 vs. TAIR 10
Match: AT1G17440.2 (Transcription initiation factor TFIID subunit A ) HSP 1 Score: 121.3 bits (303), Expect = 5.7e-28 Identity = 58/108 (53.70%), Postives = 84/108 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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