MELO3C009750 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009750
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pectin lyase-like superfamily protein
Location	chr04: 28497649 .. 28498681 (+)
RNA-Seq Expression	MELO3C009750
Synteny	MELO3C009750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTGAAGTTGAATTTTATCACAAATTCAATAGTAAAGGACATAATGTCATTGGATAGCAAGAATTATCATATTAATCTTATATCTTTTGGGTTGTAAGAATCTTACCTTTGACCACATGACAATTACTACACCAGAGAACAGTCCCAACATCGATGGAACTCACATGAGTAGTTCAAAGGAGATTAACATTCTCAATACCAATATCACAGTCGAAGATAATTGTATATCGGTGGGAGATACCAACAAACAGATAGTTATTAGCAATATTACTTGCGAATCGGGGCATGGAATTAGCATAGGATATTTGGGAAAATAGCAAGGAAAAAAAGTGGTAGGAGTGACGATGAAAAAATGTAAATTGGCCAGTACTACAAACGGTGTTCGAATCAAAACATGGCCAGATTCTGTTGGCACGTTCCCAACCACTGACATGCATTTTGAAGATATAGAAATGGTTAATGTGAGTAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTACATCTAAAATTAGGCCTCCTTAGTTTTGAACTTATTAATTAACTCAAAAGACATCAATAATATTATTGTTCGAGTTATGTATTTTTATTATGTTTTCTTTGTTTGTTCAGGTTCCATAAAAAATTAAGATCAACAAAGTAAGCTTCAAGGATATCACATACACTTCTGTAACTCCGACTGCAGTCAAACTTGTTTGCAGTGCAAGTAAATCCATGTGAGGGCCGAGTGGAAGTTGTTGATATTGGCCTCACTTATAGTGAAAGTGAAGGTCAAATTAAGTCGCAGTATGCAAATGTGAAACTCGCCATTTTAACAAAACAAAATCCCTCAATCTGTGATGAACCTGCACCAGCTGATAGTCCATCAACCGATTGAAGTTTTATAGATGAGACAAATGTTTCAAATCATTTGAACTATTCTTTAATTTTAATAGCATATTTTTGTTTTACCCTGAAAAAACTCATTGGACAAGTTTGATCGCATGCATTTAGTGATTATAGGCATGC

mRNA sequence

GAATTTGAAGTTGAATTTTATCACAAATTCAATAGTAAAGGACATAATGTCATTGGATAGCAAGAATTATCATATTAATCTTATATCTTTTGGGTTGTAAGAATCTTACCTTTGACCACATGACAATTACTACACCAGAGAACAGTCCCAACATCGATGGAACTCACATGAGTAGTTCAAAGGAGATTAACATTCTCAATACCAATATCACAGTCGAAGATAATTGTATATCGGTGGGAGATACCAACAAACAGATAGTTATTAGCAATATTACTTGCGAATCGGGGCATGGAATTAGCATAGGATATTTGGGAAAATAGCAAGGAAAAAAAGTGGTAGGAGTGACGATGAAAAAATGTAAATTGGCCAGTACTACAAACGGTGTTCGAATCAAAACATGGCCAGATTCTGTTGGCACGTTCCCAACCACTGACATGCATTTTGAAGATATAGAAATGGTTAATGTGAGTAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTTCCATAAAAAATTAAGATCAACAAAGTAAGCTTCAAGGATATCACATACACTTCTGTAACTCCGACTGCAGTCAAACTTGTTTGCAGTGCAAGTAAATCCATGTGAGGGCCGAGTGGAAGTTGTTGATATTGGCCTCACTTATAGTGAAAGTGAAGGTCAAATTAAGTCGCAGTATGCAAATGTGAAACTCGCCATTTTAACAAAACAAAATCCCTCAATCTGTGATGAACCTGCACCAGCTGATAGTCCATCAACCGATTGAAGTTTTATAGATGAGACAAATGTTTCAAATCATTTGAACTATTCTTTAATTTTAATAGCATATTTTTGTTTTACCCTGAAAAAACTCATTGGACAAGTTTGATCGCATGCATTTAGTGATTATAGGCATGC

Coding sequence (CDS)

ATGACAATTACTACACCAGAGAACAGTCCCAACATCGATGGAACTCACATGAGTAGTTCAAAGGAGATTAACATTCTCAATACCAATATCACAGTCGAAGATAATTGTATATCGGTGGGAGATACCAACAAACAGATAGTTATTAGCAATATTACTTGCGAATCGGGGCATGGAATTAGCATAGGATATTTGGGAAAATAG

Protein sequence

MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGISIGYLGK

Homology

[Close]

BLAST of MELO3C009750 vs. NCBI nr
Match: XP_011652893.2 (exopolygalacturonase [Cucumis sativus] >KGN64588.2 hypothetical protein Csa_014082 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT PENSPN DG H+SSS++INILNTNI   D+CISVGDTNKQIVIS++TC  GHGIS
Sbjct: 185 VTITAPENSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGIS 244

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 245 IGSLGK 250

[Close]

BLAST of MELO3C009750 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 9.6e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. NCBI nr
Match: XP_016903689.1 (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 9.6e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 138 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 197

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 198 IGSLGK 203

[Close]

BLAST of MELO3C009750 vs. NCBI nr
Match: KAA0045610.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 9.6e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. NCBI nr
Match: KAA0045593.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 9.6e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-14
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 2   TITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGISI 61
           TIT P +SPN DG HM  S ++ ILNTNI   D+C+S+GD +KQI +  + C  GHG+S+
Sbjct: 187 TITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSV 246

Query: 62  GYLGK 67
           G LGK
Sbjct: 247 GSLGK 251

[Close]

BLAST of MELO3C009750 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 7.4e-13
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           + I  P+ SPN DG HM  S+ +NI+ ++I   D+CIS+GD  K +VI  ITC  GHGIS
Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGIS 247

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 248 IGSLGK 253

[Close]

BLAST of MELO3C009750 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 7.4e-13
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           + I  P+ SPN DG HM  S+ +NI+ ++I   D+CIS+GD  K +VI  ITC  GHGIS
Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGIS 247

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 248 IGSLGK 253

[Close]

BLAST of MELO3C009750 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 3   ITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGISIG 62
           ++ P NSPN DG H+S S  +NI ++N +  D+CISVGD  +Q+ I+ +TC  GHGIS+G
Sbjct: 182 VSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVG 241

Query: 63  YLG 66
            LG
Sbjct: 242 SLG 244

[Close]

BLAST of MELO3C009750 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-11
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +T+T P +SPN DG HM  S  I I NT I V D+CIS+G    ++ I+ +TC  GHGIS
Sbjct: 200 VTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGIS 259

Query: 61  IGYLGK 67
           IG LG+
Sbjct: 260 IGSLGR 265

[Close]

BLAST of MELO3C009750 vs. ExPASy TrEMBL
Match: A0A0A0LX75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066500 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.5e-19
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT PENSPN DG H+SSS++INILNTNI   D+CISVGDTNKQIVIS++TC  GHGIS
Sbjct: 87  VTITAPENSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGIS 146

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 147 IGSLGK 152

[Close]

BLAST of MELO3C009750 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG H+SSS++INILNTNI   D+CISVGDTNKQ+VIS++TC  GHGIS
Sbjct: 183 VTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGIS 242

Query: 61  IGYLGK 67
           IG LGK
Sbjct: 243 IGSLGK 248

[Close]

BLAST of MELO3C009750 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-12
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 3   ITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGISIG 62
           I  PE+SPN DG H+  S  + ILN+ I+  D+CISVGD  K + +  +TC  GHGIS+G
Sbjct: 179 IVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVG 238

Query: 63  YLGK 67
            LG+
Sbjct: 239 SLGR 242

[Close]

BLAST of MELO3C009750 vs. TAIR 10
Match: AT5G39910.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-12
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT   +SPN DG H+  S+ + + ++NI   D+CIS+GD +K I IS I+C  GHGIS
Sbjct: 185 LTITADGDSPNTDGIHIQRSQNVIVYDSNIRTGDDCISIGDGSKYINISRISCGPGHGIS 244

Query: 61  IGYLGK 67
           IG LG+
Sbjct: 245 IGSLGR 250

[Close]

BLAST of MELO3C009750 vs. TAIR 10
Match: AT4G13760.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 3.8e-12
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P NSPN DG  M S   I+I NTNI   D+CI++      + ISN+ C  GHGIS
Sbjct: 190 VTITAPGNSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGIS 249

Query: 61  IGYLGK 67
           +G LGK
Sbjct: 250 VGSLGK 255

[Close]

BLAST of MELO3C009750 vs. TAIR 10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 6.4e-12
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 1   MTITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGIS 60
           +TIT P +SPN DG  M S   I I NTNI   D+CI++     ++ ISNI C  GHGIS
Sbjct: 190 VTITAPSDSPNTDGIKMGSCSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGIS 249

Query: 61  IGYLGK 67
           +G LGK
Sbjct: 250 VGSLGK 255

[Close]

BLAST of MELO3C009750 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 6.4e-12
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 3   ITTPENSPNIDGTHMSSSKEINILNTNITVEDNCISVGDTNKQIVISNITCESGHGISIG 62
           +  P  SPN DG H+  S+ + ILN+ I   D+CISVGD  K + + N+ C  GHGIS+G
Sbjct: 180 VIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVG 239

Query: 63  YLGK 67
            LG+
Sbjct: 240 SLGR 243

The following BLAST results are available for this feature:

BLAST of MELO3C009750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652893.2	1.1e-18	75.76	exopolygalacturonase [Cucumis sativus] >KGN64588.2 hypothetical protein Csa_0140...	[more]
KAA0045594.1	9.6e-18	72.73	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_016903689.1	9.6e-18	72.73	PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]	[more]
KAA0045610.1	9.6e-18	72.73	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalactur...	[more]
KAA0045593.1	9.6e-18	72.73	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalactur...	[more]

BLAST of MELO3C009750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	1.8e-14	53.85	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39766	7.4e-13	53.03	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	7.4e-13	53.03	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q05967	1.3e-12	50.79	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P26216	1.1e-11	51.52	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]

BLAST of MELO3C009750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX75	5.5e-19	75.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066500 PE=3 SV=1	[more]
A0A5A7TRZ0	4.7e-18	72.73	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYI3	4.7e-18	72.73	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3BWP4	4.7e-18	72.73	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	4.7e-18	72.73	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]

BLAST of MELO3C009750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	1.7e-12	50.00	Pectin lyase-like superfamily protein	[more]
AT5G39910.1	2.2e-12	50.00	Pectin lyase-like superfamily protein	[more]
AT4G13760.1	3.8e-12	51.52	Pectin lyase-like superfamily protein	[more]
AT2G26620.1	6.4e-12	51.52	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	6.4e-12	46.88	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 1..65 e-value: 9.3E-20 score: 70.9
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..66 e-value: 2.0E-17 score: 65.0
None	No IPR available	PANTHER	PTHR31375:SF137	NTS1 PROTEIN	coord: 2..66
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 2..66
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009750.1	MELO3C009750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity