MELO3C009368 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009368
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transmembrane protein, putative
Location	chr04: 31368412 .. 31370798 (-)
RNA-Seq Expression	MELO3C009368
Synteny	MELO3C009368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCGAAGGTCGCAGGTTCGAAACCTGCATGGGCCATTTGTTTTTTTTTAAACCTTTTTATTTCATTTCCTTTTCTCCTTAATATTACGGTTTTCTATTTCTTTTTCCTCCACTGAGATTTATCGAAGGGTCCGTCAGTTGTTCAGATTCGCGATCGTCTTCTTCAATCTCTTGGCAATTCGATTCGAAAATGGTAAAATCCCTCAATTTCTTGCGATTGGTAGCTTGAAATTTTCTTTTACGCTTGTTTTCGGTTTTGATTAGGTTTGCTTGGCGTGCCTGTTGCCTCTGTTTCTTATTCCAGTCGTCAACGCCCTTCCTGTTCTATTCTATTTAATTATGGTACGCCAAATATGACTCATTTTCTCTTTTGGATCTCATCTTTTCGCATGTTCATCTAATCGCCTTAAAGATTTGGATGGAATTTTTGTTAATATTCATCTCAATATTATTTTTCTTTTTATTTTGTTGTTTTTTCTTGAATTTTCTATTAGGGCAAAATTTATGGACTTTTTGGCTGGGAATATAGAAAACCGCAGGTGGTACCGCCGGCTTGTCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGAGTGATTCTGCTATCGTTTTTACTGAATTTTGGTTTTTAAATTGTCTTTTGACGAGCAAGATTAGGTAATTGAATGGACTTTTGTTTAGAAACTGGATACTAATGATGTGTGCATTTTATGTAGAAGTTTAAGCTTTTATCAATTTGTCTTGTTATTGACCAAATGCTTGTTGCTAAGGTAGTTTTCGGAAACAATGAAGGAGTTTGGCTTCTGCAATTTGTATTGGTTAATTTTTTTTTTCTCAAGAAGTCACGTTTAATAATTTTTGCATACTGAGGAGATTTAATAGGATTGCATCTCGTTACTTAATTACCTTCTATCGAATTGTGATTTTGGGTAATGATAGAACGTTCAGTTTTCTTTGGTACTTTGGGGTAGAAACATATATACAAGATTAGGAAGGAAAATGAACTAACTTGAAGACATTGGAAATAATTGATGGGTTCGTAAATAAGGAAGACTAACGTTAATTAGGCACTTGTGTCTATTGTTTTGTACTGTTAGGGTAGTTTCAAAAGAGCAATGACCTTTACTTAAACAGGTTCAATTATTTGTTTATTCATTTATTTTGTAAAGAAGCTGAAATAAATTCATTCAGCGAACAAAACTGCCCTAAAGGAGAAATGAGAAGATGTCCCATTATCTAAGATGAAGGATTACATAAAAGGCCCATCAATCTAAGTCGATGATAGAGGTTGAATCAGGAATAATGACAAAATGAAGAAAAAAGAAAAAAAGAAAAAGACGAAAAGAGCTTATGTTTGGCTCTCCAATCAAAGAGCTCGAACTGTAGAAGATCATCTAAATTCTTTGGAGGAAAAGTTTCCCCCGAAGATGTTGAGAGAGACTCTTCACTTCATTTACACCTCCCGTTGTTTCGATAATTACCCTTCAATTCACCAAGGAAAAAGGCCTCAAAGCTGCCCTTTTTTGTTAGTTGTGAATGAATAAATTAGAGATGGATTCTTTTGAATTTGATCGCATTCTTAGATTCCCCTCCCCCCCCCTCCAATTTTCTCTTCTCTATGTCGATCCCATGCATTTTTTATTATCTCAAGCTGCAGAAGACGTCAGAGATGTATACTACCTTAGATGAAAGTTGACACAAGGATATGTGTTTTCATTTTCTTGTACAAAACGATACATGTCTTTGTATTAGTTTCTGTATGTATTTTGATGTTTTGTTTATTTCAGACTTCACAGCAGATACGTGGGTGTTCTACATTAAACTAAATCTACTGTTTAGTGGTTTCAATTCTAGAAGTTTTGACCTCTGGCTGTTTGAAGCAAGTTTTTTTTTTCTTAATCTTAACAGGTGGAGTTGGAACCTCTAGCTGGTCAGCAACACCCACCTCCAAAACCGGTAGATGCCATGGATGATAAGCAAGACTGAGTCTGAAACTTTCTCTTGTACATACCTGTCAGCAAGATGGACAAATATTTGGGACTCTGGACTGGAATCTGTGGAAGCCGTTGATTTTAGGAAACTATGATTCCAATCGGTCAGAAAAAAGAAAAAAAAAAAAAAAAACTTCAAACTTCAAACACTAATACCATCAATACAGTTCATTTTGTCAGTGCCTGCTTTCTGAATAACACCAATACAGACATTGTATGTATACTTTCTGAATAATTTAGTTGGATGGCTTGAATATGTTCTCCTTAGATTTAGTTAATTAATGCTCGTGGATTCTTCTGTAGGAAGAAAAAAATGGAATTGGCCTAAAACATTACCTTAATGTCTTCCAACTCTTTTGCTCCGTTAGAAATTTGACATTGATGTCTTGTCTGC

mRNA sequence

AACGCGAAGGTCGCAGGTTCGAAACCTGCATGGGCCATTTGTTTTTTTTTAAACCTTTTTATTTCATTTCCTTTTCTCCTTAATATTACGGTTTTCTATTTCTTTTTCCTCCACTGAGATTTATCGAAGGGTCCGTCAGTTGTTCAGATTCGCGATCGTCTTCTTCAATCTCTTGGCAATTCGATTCGAAAATGGTTTGCTTGGCGTGCCTGTTGCCTCTGTTTCTTATTCCAGTCGTCAACGCCCTTCCTGTTCTATTCTATTTAATTATGGGCAAAATTTATGGACTTTTTGGCTGGGAATATAGAAAACCGCAGGTGGTACCGCCGGCTTGTCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGGAGTTGGAACCTCTAGCTGGTCAGCAACACCCACCTCCAAAACCGGTAGATGCCATGGATGATAAGCAAGACTGAGTCTGAAACTTTCTCTTGTACATACCTGTCAGCAAGATGGACAAATATTTGGGACTCTGGACTGGAATCTGTGGAAGCCGTTGATTTTAGGAAACTATGATTCCAATCGGTCAGAAAAAAGAAAAAAAAAAAAAAAAACTTCAAACTTCAAACACTAATACCATCAATACAGTTCATTTTGTCAGTGCCTGCTTTCTGAATAACACCAATACAGACATTGTATGTATACTTTCTGAATAATTTAGTTGGATGGCTTGAATATGTTCTCCTTAGATTTAGTTAATTAATGCTCGTGGATTCTTCTGTAGGAAGAAAAAAATGGAATTGGCCTAAAACATTACCTTAATGTCTTCCAACTCTTTTGCTCCGTTAGAAATTTGACATTGATGTCTTGTCTGC

Coding sequence (CDS)

ATGGTTTGCTTGGCGTGCCTGTTGCCTCTGTTTCTTATTCCAGTCGTCAACGCCCTTCCTGTTCTATTCTATTTAATTATGGGCAAAATTTATGGACTTTTTGGCTGGGAATATAGAAAACCGCAGGTGGTACCGCCGGCTTGTCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGGAGTTGGAACCTCTAGCTGGTCAGCAACACCCACCTCCAAAACCGGTAGATGCCATGGATGATAAGCAAGACTGA

Protein sequence

MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNVELEPLAGQQHPPPKPVDAMDDKQD

Homology

[Close]

BLAST of MELO3C009368 vs. NCBI nr
Match: XP_008442719.1 (PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo] >XP_011651967.1 uncharacterized protein LOC105434961 [Cucumis sativus] >KGN58993.1 hypothetical protein Csa_002586 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 4.3e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEPLAGQQHPPPKPVDAMDDKQD
Sbjct: 61 ELEPLAGQQHPPPKPVDAMDDKQD 84

[Close]

BLAST of MELO3C009368 vs. NCBI nr
Match: XP_038903023.1 (uncharacterized protein LOC120089725 [Benincasa hispida])

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLFYLIMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSNV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          +LEPLAGQQHPPPK VDA D+KQD
Sbjct: 61 DLEPLAGQQHPPPKAVDAADEKQD 84

[Close]

BLAST of MELO3C009368 vs. NCBI nr
Match: XP_023538875.1 (uncharacterized protein LOC111799671 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33
Identity = 76/84 (90.48%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLF+LIMGKIY +FGWEYRKPQ VPPACPYRPAAKQNSN 
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQGVPPACPYRPAAKQNSNE 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEPLAGQQHPPPK VDA+D KQD
Sbjct: 61 ELEPLAGQQHPPPKAVDAVDAKQD 84

[Close]

BLAST of MELO3C009368 vs. NCBI nr
Match: XP_022935583.1 (uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata] >XP_022935584.1 uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata] >XP_022935587.1 uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 2.7e-33
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSN 
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNA 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEP AGQQ PPPK VDAMDDKQD
Sbjct: 61 ELEPPAGQQLPPPKVVDAMDDKQD 84

[Close]

BLAST of MELO3C009368 vs. NCBI nr
Match: XP_022144783.1 (uncharacterized protein LOC111014385 [Momordica charantia])

HSP 1 Score: 151.0 bits (380), Expect = 4.6e-33
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKP+ VPPACPYRPAAKQN NV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEP AGQQHP PK VDA+D K+D
Sbjct: 61 ELEPQAGQQHPLPKAVDAVDTKED 84

[Close]

BLAST of MELO3C009368 vs. ExPASy TrEMBL
Match: A0A0A0LB44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEPLAGQQHPPPKPVDAMDDKQD
Sbjct: 61 ELEPLAGQQHPPPKPVDAMDDKQD 84

[Close]

BLAST of MELO3C009368 vs. ExPASy TrEMBL
Match: A0A1S3B744 (uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEPLAGQQHPPPKPVDAMDDKQD
Sbjct: 61 ELEPLAGQQHPPPKPVDAMDDKQD 84

[Close]

BLAST of MELO3C009368 vs. ExPASy TrEMBL
Match: A0A6J1F5U6 (uncharacterized protein LOC111442415 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442415 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSN 
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNA 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEP AGQQ PPPK VDAMDDKQD
Sbjct: 61 ELEPPAGQQLPPPKVVDAMDDKQD 84

[Close]

BLAST of MELO3C009368 vs. ExPASy TrEMBL
Match: A0A6J1CU80 (uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014385 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-33
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKP+ VPPACPYRPAAKQN NV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDDKQD 85
          ELEP AGQQHP PK VDA+D K+D
Sbjct: 61 ELEPQAGQQHPLPKAVDAVDTKED 84

[Close]

BLAST of MELO3C009368 vs. ExPASy TrEMBL
Match: A0A6J1IYJ1 (uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 73/81 (90.12%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSNV
Sbjct: 1  MVCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

Query: 61 ELEPLAGQQHPPPKPVDAMDD 82
          ELEPLAGQQ PPPK VD   D
Sbjct: 61 ELEPLAGQQLPPPKVVDEKQD 81

[Close]

BLAST of MELO3C009368 vs. TAIR 10
Match: AT5G03460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1  MVCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60
          MVC+ CL+PLFL+P++N +P +    M K+Y   GWEYRKP  VPPACP++P AK ++  
Sbjct: 1  MVCVMCLVPLFLVPLINLMPRIIDYFMAKLYAWLGWEYRKPARVPPACPFKPVAKNDNAT 60

Query: 61 ELEPLAGQQ 70
          ++    G +
Sbjct: 61 KVGAETGTE 69

The following BLAST results are available for this feature:

BLAST of MELO3C009368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442719.1	4.3e-39	100.00	PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo] >XP_011651967.1 u...	[more]
XP_038903023.1	1.3e-35	92.86	uncharacterized protein LOC120089725 [Benincasa hispida]	[more]
XP_023538875.1	1.6e-33	90.48	uncharacterized protein LOC111799671 [Cucurbita pepo subsp. pepo]	[more]
XP_022935583.1	2.7e-33	91.67	uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata] >XP_0229355...	[more]
XP_022144783.1	4.6e-33	89.29	uncharacterized protein LOC111014385 [Momordica charantia]	[more]

BLAST of MELO3C009368 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C009368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB44	2.1e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1	[more]
A0A1S3B744	2.1e-39	100.00	uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=...	[more]
A0A6J1F5U6	1.3e-33	91.67	uncharacterized protein LOC111442415 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CU80	2.2e-33	89.29	uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1IYJ1	2.7e-31	90.12	uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805...	[more]

BLAST of MELO3C009368 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03460.1	1.1e-13	46.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..84
None	No IPR available	PANTHER	PTHR37756	TRANSMEMBRANE PROTEIN	coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009368.1	MELO3C009368.1	mRNA