MELO3C009356 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009356
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ABC transporter B family member 1-like
Location	chr04: 31442971 .. 31443551 (+)
RNA-Seq Expression	MELO3C009356
Synteny	MELO3C009356

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTGCATTGATAAGGAAGGCAGAGCTTATGCTATTAGACGAGGCAACAAGTGCACTCGATGCCGAGTCAGAGCGATCAGTCCAGGAGGCACTCGACCGAGCTTGTTCAGGAAAAACCACAATCGTAGTTGCCCATCGACTATCAACTATCAGGAATGCTCATGTCATTGCAGTAATTGATGATGGCAAAGTTTCCGAACAGGGATCACACTCACATTTGTTGAAAAATTACCCTGATGGGTGTTACGCCAGGATGATTCAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACATCAGGTTCAACTTCCTCAGCAAGAACTAGAGAGGATGAGGAGAGAGATAGCTAGGAAATTGAACTTTAGTAGTTGAAAAAGAAAGAAAGAAAAAAGAAAGAAACACAAGATCACTTATACCCTTATTAATTCTTTTGGGTTTTGTCTGGTATTTTGTATCCAGTTAGTATATTAAGTGTATTATCTTAAATTTTTGCCCCACTTATCAGAAAACCATTCTTTGAGAATCTAGTGCATGTAAACGCAAGAATAAGATCTTTTGAGACAATGGGAACCAAAC

mRNA sequence

TCGTGCATTGATAAGGAAGGCAGAGCTTATGCTATTAGACGAGGCAACAAGTGCACTCGATGCCGAGTCAGAGCGATCAGTCCAGGAGGCACTCGACCGAGCTTGTTCAGGAAAAACCACAATCGTAGTTGCCCATCGACTATCAACTATCAGGAATGCTCATGTCATTGCAGTAATTGATGATGGCAAAGTTTCCGAACAGGGATCACACTCACATTTGTTGAAAAATTACCCTGATGGGTGTTACGCCAGGATGATTCAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACATCAGGTTCAACTTCCTCAGCAAGAACTAGAGAGGATGAGGAGAGAGATAGCTAGGAAATTGAACTTTAGTAGTTGAAAAAGAAAGAAAGAAAAAAGAAAGAAACACAAGATCACTTATACCCTTATTAATTCTTTTGGGTTTTGTCTGGTATTTTGTATCCAGTTAGTATATTAAGTGTATTATCTTAAATTTTTGCCCCACTTATCAGAAAACCATTCTTTGAGAATCTAGTGCATGTAAACGCAAGAATAAGATCTTTTGAGACAATGGGAACCAAAC

Coding sequence (CDS)

ATGCTATTAGACGAGGCAACAAGTGCACTCGATGCCGAGTCAGAGCGATCAGTCCAGGAGGCACTCGACCGAGCTTGTTCAGGAAAAACCACAATCGTAGTTGCCCATCGACTATCAACTATCAGGAATGCTCATGTCATTGCAGTAATTGATGATGGCAAAGTTTCCGAACAGGGATCACACTCACATTTGTTGAAAAATTACCCTGATGGGTGTTACGCCAGGATGATTCAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACATCAGGTTCAACTTCCTCAGCAAGAACTAGAGAGGATGAGGAGAGAGATAGCTAG

Protein sequence

MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS

Homology

[Close]

BLAST of MELO3C009356 vs. NCBI nr
Match: KAA0043993.1 (ABC transporter B family member 1 [Cucumis melo var. makuwa] >TYK25147.1 ABC transporter B family member 1 [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.1e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1251 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1310

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS
Sbjct: 1311 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 1358

[Close]

BLAST of MELO3C009356 vs. NCBI nr
Match: KAA0043994.1 (ABC transporter B family member 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.1e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1250 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1309

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS
Sbjct: 1310 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 1357

[Close]

BLAST of MELO3C009356 vs. NCBI nr
Match: XP_031737655.1 (LOW QUALITY PROTEIN: ABC transporter B family member 1 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 2.7e-49
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1254 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1313

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDE RDS
Sbjct: 1314 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEVRDS 1361

[Close]

BLAST of MELO3C009356 vs. NCBI nr
Match: TYK25146.1 (ABC transporter B family member 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 2.7e-49
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1261 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1320

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDE RDS
Sbjct: 1321 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEGRDS 1368

[Close]

BLAST of MELO3C009356 vs. NCBI nr
Match: XP_022934453.1 (ABC transporter B family member 1-like [Cucurbita moschata])

HSP 1 Score: 203.8 bits (517), Expect = 7.7e-49
Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1250 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1309

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARM+QLQRFTHSQVIGMTSGSTSSA+TREDE+R+S
Sbjct: 1310 HSHLLKNYPDGCYARMVQLQRFTHSQVIGMTSGSTSSAKTREDEDRES 1357

[Close]

BLAST of MELO3C009356 vs. ExPASy Swiss-Prot
Match: Q9ZR72 (ABC transporter B family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCB1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-43
Identity = 91/104 (87.50%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALD+ACSG+T+IVVAHRLSTIRNAHVIAVIDDGKV+EQGS
Sbjct: 1184 MLLDEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGS 1243

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDE 105
            HSHLLKN+PDG YARMIQLQRFTH+QVIGMTSG  SS+R +ED+
Sbjct: 1244 HSHLLKNHPDGIYARMIQLQRFTHTQVIGMTSG--SSSRVKEDD 1285

[Close]

BLAST of MELO3C009356 vs. ExPASy Swiss-Prot
Match: Q9SYI3 (ABC transporter B family member 5 OS=Arabidopsis thaliana OX=3702 GN=ABCB5 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22
Identity = 58/102 (56.86%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESER VQEALDR    +TT++VAHRLST+RNA +IAVI  GK+ E+GS
Sbjct: 513 LLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTVRNADIIAVIHRGKIVEEGS 572

Query: 61  HSHLLKNYPDGCYARMIQLQRFT-HSQVIGMTSGSTSSARTR 102
           HS LLK++ +G Y+++++LQ     S+ + ++ GS SS  +R
Sbjct: 573 HSELLKDH-EGAYSQLLRLQEINKESKRLEISDGSISSGSSR 613

[Close]

BLAST of MELO3C009356 vs. ExPASy Swiss-Prot
Match: Q8LPK2 (ABC transporter B family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCB2 PE=1 SV=3)

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-22
Identity = 52/80 (65.00%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESE+SVQEALDR   G+TT+VVAHRLST+RNA +IAV+ +GK+ E G+
Sbjct: 561 LLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGN 620

Query: 61  HSHLLKNYPDGCYARMIQLQ 81
           H +L+ N PDG Y+ +++LQ
Sbjct: 621 HENLISN-PDGAYSSLLRLQ 639

[Close]

BLAST of MELO3C009356 vs. ExPASy Swiss-Prot
Match: Q9M1Q9 (ABC transporter B family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCB21 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-22
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESER VQEALDR    +TT+VVAHRLST+RNA +IAVI  GK+ E+GS
Sbjct: 563 LLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGS 622

Query: 61  HSHLLKNYPDGCYARMIQLQR-------FTHSQVIGMTSGSTSSAR 100
           HS LL++ P+G Y+++I+LQ         T  Q + M S   SS R
Sbjct: 623 HSELLRD-PEGAYSQLIRLQEDTKQTEDSTDEQKLSMESMKRSSLR 667

[Close]

BLAST of MELO3C009356 vs. ExPASy Swiss-Prot
Match: Q9SYI2 (ABC transporter B family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCB3 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-22
Identity = 54/81 (66.67%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESER VQEALDR    +TT++VAHRLST+RNA +IAVI  GK+ E+GS
Sbjct: 508 LLLDEATSALDAESERVVQEALDRVMMSRTTVIVAHRLSTVRNADMIAVIHRGKIVEEGS 567

Query: 61  HSHLLKNYPDGCYARMIQLQR 82
           HS LLK++ +G YA++I+LQ+
Sbjct: 568 HSELLKDH-EGAYAQLIRLQK 587

[Close]

BLAST of MELO3C009356 vs. ExPASy TrEMBL
Match: A0A5A7TKI3 (ABC transporter B family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002720 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1251 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1310

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS
Sbjct: 1311 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 1358

[Close]

BLAST of MELO3C009356 vs. ExPASy TrEMBL
Match: A0A5A7TL39 (ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003400 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1250 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1309

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS
Sbjct: 1310 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 1357

[Close]

BLAST of MELO3C009356 vs. ExPASy TrEMBL
Match: A0A5D3DND1 (ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002710 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1261 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1320

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDE RDS
Sbjct: 1321 HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEGRDS 1368

[Close]

BLAST of MELO3C009356 vs. ExPASy TrEMBL
Match: A0A6J1J3W2 (ABC transporter B family member 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481559 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.7e-49
Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1247 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1306

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARM+QLQRFTHSQVIGMTSGSTSSA+TREDE+R+S
Sbjct: 1307 HSHLLKNYPDGCYARMVQLQRFTHSQVIGMTSGSTSSAKTREDEDRES 1354

[Close]

BLAST of MELO3C009356 vs. ExPASy TrEMBL
Match: A0A6J1F7P8 (ABC transporter B family member 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441627 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.7e-49
Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS
Sbjct: 1250 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 1309

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS 109
            HSHLLKNYPDGCYARM+QLQRFTHSQVIGMTSGSTSSA+TREDE+R+S
Sbjct: 1310 HSHLLKNYPDGCYARMVQLQRFTHSQVIGMTSGSTSSAKTREDEDRES 1357

[Close]

BLAST of MELO3C009356 vs. TAIR 10
Match: AT2G36910.1 (ATP binding cassette subfamily B1 )

HSP 1 Score: 175.6 bits (444), Expect = 2.1e-44
Identity = 91/104 (87.50%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 1    MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
            MLLDEATSALDAESERSVQEALD+ACSG+T+IVVAHRLSTIRNAHVIAVIDDGKV+EQGS
Sbjct: 1184 MLLDEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGS 1243

Query: 61   HSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDE 105
            HSHLLKN+PDG YARMIQLQRFTH+QVIGMTSG  SS+R +ED+
Sbjct: 1244 HSHLLKNHPDGIYARMIQLQRFTHTQVIGMTSG--SSSRVKEDD 1285

[Close]

BLAST of MELO3C009356 vs. TAIR 10
Match: AT4G01830.1 (P-glycoprotein 5 )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 58/102 (56.86%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESER VQEALDR    +TT++VAHRLST+RNA +IAVI  GK+ E+GS
Sbjct: 513 LLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTVRNADIIAVIHRGKIVEEGS 572

Query: 61  HSHLLKNYPDGCYARMIQLQRFT-HSQVIGMTSGSTSSARTR 102
           HS LLK++ +G Y+++++LQ     S+ + ++ GS SS  +R
Sbjct: 573 HSELLKDH-EGAYSQLLRLQEINKESKRLEISDGSISSGSSR 613

[Close]

BLAST of MELO3C009356 vs. TAIR 10
Match: AT4G25960.1 (P-glycoprotein 2 )

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-23
Identity = 52/80 (65.00%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESE+SVQEALDR   G+TT+VVAHRLST+RNA +IAV+ +GK+ E G+
Sbjct: 561 LLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGN 620

Query: 61  HSHLLKNYPDGCYARMIQLQ 81
           H +L+ N PDG Y+ +++LQ
Sbjct: 621 HENLISN-PDGAYSSLLRLQ 639

[Close]

BLAST of MELO3C009356 vs. TAIR 10
Match: AT3G62150.1 (P-glycoprotein 21 )

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-23
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESER VQEALDR    +TT+VVAHRLST+RNA +IAVI  GK+ E+GS
Sbjct: 563 LLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGS 622

Query: 61  HSHLLKNYPDGCYARMIQLQR-------FTHSQVIGMTSGSTSSAR 100
           HS LL++ P+G Y+++I+LQ         T  Q + M S   SS R
Sbjct: 623 HSELLRD-PEGAYSQLIRLQEDTKQTEDSTDEQKLSMESMKRSSLR 667

[Close]

BLAST of MELO3C009356 vs. TAIR 10
Match: AT4G01820.1 (P-glycoprotein 3 )

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-23
Identity = 54/81 (66.67%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1   MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGS 60
           +LLDEATSALDAESER VQEALDR    +TT++VAHRLST+RNA +IAVI  GK+ E+GS
Sbjct: 508 LLLDEATSALDAESERVVQEALDRVMMSRTTVIVAHRLSTVRNADMIAVIHRGKIVEEGS 567

Query: 61  HSHLLKNYPDGCYARMIQLQR 82
           HS LLK++ +G YA++I+LQ+
Sbjct: 568 HSELLKDH-EGAYAQLIRLQK 587

The following BLAST results are available for this feature:

BLAST of MELO3C009356 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043993.1	4.1e-50	100.00	ABC transporter B family member 1 [Cucumis melo var. makuwa] >TYK25147.1 ABC tra...	[more]
KAA0043994.1	4.1e-50	100.00	ABC transporter B family member 1-like [Cucumis melo var. makuwa]	[more]
XP_031737655.1	2.7e-49	99.07	LOW QUALITY PROTEIN: ABC transporter B family member 1 [Cucumis sativus]	[more]
TYK25146.1	2.7e-49	99.07	ABC transporter B family member 1-like [Cucumis melo var. makuwa]	[more]
XP_022934453.1	7.7e-49	96.30	ABC transporter B family member 1-like [Cucurbita moschata]	[more]

BLAST of MELO3C009356 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR72	3.0e-43	87.50	ABC transporter B family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCB1 PE=1 ...	[more]
Q9SYI3	1.7e-22	56.86	ABC transporter B family member 5 OS=Arabidopsis thaliana OX=3702 GN=ABCB5 PE=3 ...	[more]
Q8LPK2	3.8e-22	65.00	ABC transporter B family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCB2 PE=1 ...	[more]
Q9M1Q9	4.9e-22	57.55	ABC transporter B family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCB21 PE=...	[more]
Q9SYI2	4.9e-22	66.67	ABC transporter B family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCB3 PE=3 ...	[more]

BLAST of MELO3C009356 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKI3	2.0e-50	100.00	ABC transporter B family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TL39	2.0e-50	100.00	ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3DND1	1.3e-49	99.07	ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1J3W2	3.7e-49	96.30	ABC transporter B family member 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114815...	[more]
A0A6J1F7P8	3.7e-49	96.30	ABC transporter B family member 1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of MELO3C009356 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36910.1	2.1e-44	87.50	ATP binding cassette subfamily B1	[more]
AT4G01830.1	1.2e-23	56.86	P-glycoprotein 5	[more]
AT4G25960.1	2.7e-23	65.00	P-glycoprotein 2	[more]
AT3G62150.1	3.5e-23	57.55	P-glycoprotein 21	[more]
AT4G01820.1	3.5e-23	66.67	P-glycoprotein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..87 e-value: 1.0E-34 score: 121.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	PANTHER	PTHR24222:SF54	BRACHYTIC2	coord: 1..83
None	No IPR available	PANTHER	PTHR24222	ABC TRANSPORTER B FAMILY	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009356.1	MELO3C009356.1	mRNA