MELO3C009340 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009340
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 31562587 .. 31564054 (-)
RNA-Seq Expression	MELO3C009340
Synteny	MELO3C009340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGGGCTAACCGCGCTAGAGTCTTCGTCATCAGCGAGAAGTTTCTTCCGGCCTCCTACCTCGAGATTGTCGCCGTCGATTTCATCGGCCATTGACTAACGAAGAGGAAATATGGGCGGTGATCGGAAGCGAATCTTGATAGGTTTGACTGTGGCGATGTTCGTAGGATTGGTAGTGTACATGAAGCTTTGGACCATCGACTATTCGATGTCTACCGATGAAGCCGAACTTCTCAGGTTTGGATTTTCCATTCTTGGTTCGTTTTTCTCGTTTTGTAGGTTAATTTTGCGAAAATCTGTGTGAAATTATAGGAAATGGTACCGATTTCTCTTAGCGTTGTCGGAACTTCGTAATGTAAAATTCAGTCAGATCATCGGTTAGCTTTAAATTAATCGTTTATTGATCATTCAGACGGCAGTTCGATCTTGCAAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGATAACGAACTAGATAGAGCTAATAGATGTAAAAGTGAACTAAACCAGGTCAGTACTCTAGGGTTAAGTTGCCATGAAAATTGATGAATTCAATAGAGTTTGTTTCTCATTGCATTGATTCAGCGGAATGGTTTCGTTAAGACTTATGCAATTACTTCTCTGAAATCGGTTGTTTAATGGGCGCATGCTTGAATTTTGTTTATCTTTGTTGCTGCTCTCGTGATTTACGGCTTTCCAATCAAAAGATTCATAACGTCTTGCATTGTCAACCGGAAAAAAAAAAACACTTGTTTGACGCTGAATATGAGAAATGCTTGTGTATTGAACAAGAGCTCTGTCCTTGGCAGCATGAACTTTGAAATATTTCTCACATTGTTGATCTCTTATTAGTAGTAAGATGCTGTTTTGAAAGTAACTGGTTTAATTTTGCTAAGTTTTTGGGTTTGAGGTTATTTAACATGATATTGGATCATTGGTATTCAAACGTGGCAATGTGATTCCCTTTTCAATTACTATTGATATCACTTGTTGGATCTCCCTAAATTCCTAATTTTGAAATCTACAAGTGAGAGGAATGTGGAGGAATGTTGAGAAACTAAAAACAAAAAGCCAAATTCAAATGATTATTAAAGGGGTCAAAACTCTTGAATTTAACACCACGAGGCTGTAAGTTGCTTGTACATCTTTGCATTTGACCACTGTTTGTGCACAATTCTACTTAGCAGCTTAAGGCATCATTTGAGAAGGTGGGGGATGCTGCTAGGATCAATGAGAAGCTAACAAAGATGCAAGAGGTAATCCCTTTGATGTAACTAATTAATGAGTTCTTCCTTCAAAAAAATTTGGAAATGATTTCAGAACTAAAACTTTGTCCCACATATTTTCTCTTAAACATGTCAAAAAAATTTCAGGAAAACTTTGCTCTCCGCACACAAGTGGATGCTTTACAGCGAAGGCTAGAGGCCGAGAAGTCGAGATGTGGCTCTCAATAA

mRNA sequence

CAACGGGCTAACCGCGCTAGAGTCTTCGTCATCAGCGAGAAGTTTCTTCCGGCCTCCTACCTCGAGATTGTCGCCGTCGATTTCATCGGCCATTGACTAACGAAGAGGAAATATGGGCGGTGATCGGAAGCGAATCTTGATAGGTTTGACTGTGGCGATGTTCGTAGGATTGGTAGTGTACATGAAGCTTTGGACCATCGACTATTCGATGTCTACCGATGAAGCCGAACTTCTCAGACGGCAGTTCGATCTTGCAAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGATAACGAACTAGATAGAGCTAATAGATGTAAAAGTGAACTAAACCAGCTTAAGGCATCATTTGAGAAGGTGGGGGATGCTGCTAGGATCAATGAGAAGCTAACAAAGATGCAAGAGGAAAACTTTGCTCTCCGCACACAAGTGGATGCTTTACAGCGAAGGCTAGAGGCCGAGAAGTCGAGATGTGGCTCTCAATAA

Coding sequence (CDS)

ATGGGCGGTGATCGGAAGCGAATCTTGATAGGTTTGACTGTGGCGATGTTCGTAGGATTGGTAGTGTACATGAAGCTTTGGACCATCGACTATTCGATGTCTACCGATGAAGCCGAACTTCTCAGACGGCAGTTCGATCTTGCAAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGATAACGAACTAGATAGAGCTAATAGATGTAAAAGTGAACTAAACCAGCTTAAGGCATCATTTGAGAAGGTGGGGGATGCTGCTAGGATCAATGAGAAGCTAACAAAGATGCAAGAGGAAAACTTTGCTCTCCGCACACAAGTGGATGCTTTACAGCGAAGGCTAGAGGCCGAGAAGTCGAGATGTGGCTCTCAATAA

Protein sequence

MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEAEKSRCGSQ

Homology

[Close]

BLAST of MELO3C009340 vs. NCBI nr
Match: XP_008442682.1 (PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo] >XP_008442683.1 PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo] >TYK25130.1 uncharacterized protein E5676_scaffold352G002550 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA
Sbjct: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120

Query: 121 EKSRCGSQ 129
           EKSRCGSQ
Sbjct: 121 EKSRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. NCBI nr
Match: KAA0044010.1 (uncharacterized protein E6C27_scaffold236G003560 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.0e-60
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELN-QLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE 120
           RMYDNELDRANRCKSELN QLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE
Sbjct: 61  RMYDNELDRANRCKSELNQQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE 120

Query: 121 AEKSRCGSQ 129
           AEKSRCGSQ
Sbjct: 121 AEKSRCGSQ 129

[Close]

BLAST of MELO3C009340 vs. NCBI nr
Match: XP_004137824.1 (uncharacterized protein LOC101217573 isoform X2 [Cucumis sativus] >XP_031737689.1 uncharacterized protein LOC101217573 isoform X2 [Cucumis sativus] >KGN58960.1 hypothetical protein Csa_001294 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58
Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MG DRKRILIGLTVAMF+GLVVYMKLWTIDYSMS DEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGSDRKRILIGLTVAMFLGLVVYMKLWTIDYSMSADEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYDNELDRANRCKSELNQLK SFEKVGDAA+INEKLTK QEENFALRTQVDALQRRLEA
Sbjct: 61  RMYDNELDRANRCKSELNQLKVSFEKVGDAAKINEKLTKTQEENFALRTQVDALQRRLEA 120

Query: 121 EKSRCGSQ 129
           EKSRCGSQ
Sbjct: 121 EKSRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. NCBI nr
Match: XP_031737686.1 (uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus] >XP_031737687.1 uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus] >XP_031737688.1 uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 5.4e-57
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MG DRKRILIGLTVAMF+GLVVYMKLWTIDYSMS DEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGSDRKRILIGLTVAMFLGLVVYMKLWTIDYSMSADEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELN-QLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE 120
           RMYDNELDRANRCKSELN QLK SFEKVGDAA+INEKLTK QEENFALRTQVDALQRRLE
Sbjct: 61  RMYDNELDRANRCKSELNQQLKVSFEKVGDAAKINEKLTKTQEENFALRTQVDALQRRLE 120

Query: 121 AEKSRCGSQ 129
           AEKSRCGSQ
Sbjct: 121 AEKSRCGSQ 129

[Close]

BLAST of MELO3C009340 vs. NCBI nr
Match: XP_038903114.1 (uncharacterized protein LOC120089790 [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MG DRKRILIGLTVAMF+GLVVYMKLWTIDYSMS+DEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGDDRKRILIGLTVAMFLGLVVYMKLWTIDYSMSSDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYD ELDRANRC  +LN+LK SFEKVGDAARIN+KLTKMQEENFALRTQVDALQRRLEA
Sbjct: 61  RMYDRELDRANRCNIDLNKLKESFEKVGDAARINQKLTKMQEENFALRTQVDALQRRLEA 120

Query: 121 EKSRCGSQ 129
           EK RCGSQ
Sbjct: 121 EKLRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. ExPASy TrEMBL
Match: A0A1S3B6A3 (uncharacterized protein LOC103486481 OS=Cucumis melo OX=3656 GN=LOC103486481 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.8e-62
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA
Sbjct: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120

Query: 121 EKSRCGSQ 129
           EKSRCGSQ
Sbjct: 121 EKSRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. ExPASy TrEMBL
Match: A0A5D3DPC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002550 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.8e-62
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA
Sbjct: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120

Query: 121 EKSRCGSQ 129
           EKSRCGSQ
Sbjct: 121 EKSRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. ExPASy TrEMBL
Match: A0A5A7TLC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003560 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELN-QLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE 120
           RMYDNELDRANRCKSELN QLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE
Sbjct: 61  RMYDNELDRANRCKSELNQQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLE 120

Query: 121 AEKSRCGSQ 129
           AEKSRCGSQ
Sbjct: 121 AEKSRCGSQ 129

[Close]

BLAST of MELO3C009340 vs. ExPASy TrEMBL
Match: A0A0A0LAF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G739550 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MG DRKRILIGLTVAMF+GLVVYMKLWTIDYSMS DEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGSDRKRILIGLTVAMFLGLVVYMKLWTIDYSMSADEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYDNELDRANRCKSELNQLK SFEKVGDAA+INEKLTK QEENFALRTQVDALQRRLEA
Sbjct: 61  RMYDNELDRANRCKSELNQLKVSFEKVGDAAKINEKLTKTQEENFALRTQVDALQRRLEA 120

Query: 121 EKSRCGSQ 129
           EKSRCGSQ
Sbjct: 121 EKSRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. ExPASy TrEMBL
Match: A0A6J1G4Y8 (uncharacterized protein LOC111450864 OS=Cucurbita moschata OX=3662 GN=LOC111450864 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.8e-50
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60
           MG +RK+IL+GL  AMF+GLVVYM+LWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR
Sbjct: 1   MGRNRKQILVGLAAAMFLGLVVYMRLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWR 60

Query: 61  RMYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEA 120
           RMYD+ELDRA  C SELN+LK SFEKVGD ARIN+KLT +QEEN ALR +VDALQ RLEA
Sbjct: 61  RMYDHELDRAKSCNSELNKLKESFEKVGDVARINQKLTNLQEENAALRKEVDALQLRLEA 120

Query: 121 EKSRCGSQ 129
           EKSRCGSQ
Sbjct: 121 EKSRCGSQ 128

[Close]

BLAST of MELO3C009340 vs. TAIR 10
Match: AT2G37195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 64/127 (50.39%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 2   GGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRR 61
           G +RK IL+GL +A+ +G+ VY++LWTIDY++S+D+ E LRRQFDLANREAMDESA+WRR
Sbjct: 4   GSERKTILVGLVLALVLGIGVYLRLWTIDYTLSSDDTERLRRQFDLANREAMDESADWRR 63

Query: 62  MYDNELDRANRCKSELNQLKASFEKVGDAARINEKLTKMQEENFALRTQVDALQRRLEAE 121
           M+D E ++A++C +EL+ +K S    G+    N+KL  +++EN AL  Q++ L++ LEA 
Sbjct: 64  MFDKEAEKASKCNTELSLIKESSGN-GNTFTSNQKLESLKKENAALLIQIETLKQELEAS 123

Query: 122 KSRCGSQ 129
           + +C S+
Sbjct: 124 RLKCHSR 129

The following BLAST results are available for this feature:

BLAST of MELO3C009340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442682.1	1.6e-61	100.00	PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo] >XP_008442683.1 P...	[more]
KAA0044010.1	4.0e-60	99.22	uncharacterized protein E6C27_scaffold236G003560 [Cucumis melo var. makuwa]	[more]
XP_004137824.1	2.2e-58	95.31	uncharacterized protein LOC101217573 isoform X2 [Cucumis sativus] >XP_031737689....	[more]
XP_031737686.1	5.4e-57	94.57	uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus] >XP_031737687....	[more]
XP_038903114.1	1.7e-55	91.41	uncharacterized protein LOC120089790 [Benincasa hispida]	[more]

BLAST of MELO3C009340 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C009340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6A3	7.8e-62	100.00	uncharacterized protein LOC103486481 OS=Cucumis melo OX=3656 GN=LOC103486481 PE=...	[more]
A0A5D3DPC8	7.8e-62	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TLC1	1.9e-60	99.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LAF5	1.1e-58	95.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G739550 PE=4 SV=1	[more]
A0A6J1G4Y8	6.8e-50	82.81	uncharacterized protein LOC111450864 OS=Cucurbita moschata OX=3662 GN=LOC1114508...	[more]

BLAST of MELO3C009340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37195.1	1.2e-30	50.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..124
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	PANTHER	PTHR37215	ACYL-COA-BINDING DOMAIN PROTEIN	coord: 4..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009340.1	MELO3C009340.1	mRNA