MELO3C009279 (gene) Melon (DHL92) v4

Overview


Name	MELO3C009279
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Histone H2B
Location	chr04: 31959250 .. 31960341 (+)
RNA-Seq Expression	MELO3C009279
Synteny	MELO3C009279

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATATAAGAATTATTTTTGTATTTTATTAAAAATCTATGCATTAAAATTTAACAAAGAAAATAAAATTCTCCAGCTTATGTATGAAATTTGAACCCTTAGGCCTTTCCCATGGCGAGAGATGTCAAGTCCGTCTGAAGTTCGGAACAAATCGTAAACTAAGCATGTAATCTCAAATGCAACGTATCTAAATAAAATCCAACGGTGATGTTGACGCCACGTCGATGATCCGCGTGAAAGTCCAATTAACCAATAAGAAACCACTCCATTCTTCTATATAAACTCTCCTCTGCAACATTCTCCAAAATCGTTCAATATCATTAAATCCCCCCTTGCCGTTCCCAACACCGCTAGAGCTCTTTCACCTTCATACCAACAATGGCGCCAACGAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCAGCGGAGAAAACCCCTTCCTCGGCAGAGAAGAAGCCAAAGGCTGAGAAGAAGATCGCCAAAGACAGTGGCGACAAGAAGAAGAAGAAGATCAAAAAGAGCACCGAGACTTACAAGATCTACATTTTCAAGGTTTTGAAGCAGGTTCATCCCGACATTGGAATCTCCAGCAAGGCAATGGGCATCATGAACAGTTTCATCAACGATATCTTCGAAAAACTTGCTCAAGAGGCTTCGAAATTGGCAAGATACAACAAGAAACCTACGATCACCTCACGGGAGATCCAAACCGCCGTTCGATTAGTGTTGCCTGGTGAGTTAGCGAAGCACGCTGTTTCTGAAGGAACTAAGGCCGTAACCAAATTTACAAGCTCTTAGATTCCGGTGTCGGTGAATTTTGGAATTAGGGTTTCGTTTTGGGTACTTTTTGTGTAGATCTTGGTGTCTCTCTGGTTACAGGTGTATCGAAATGCCTATAGTTTTAATGGATAACAAAGTTCTTTCTTCGGTAGATTCTCTTCTATTTTCTTTGGCAAATGCTGTGATACTTCTATCCTAATGTGAAAAATAGGGTTTGCACAGATCCGATCGTTATTGTGCTTTGGATTCGATTATAGAATACATGCATCATGATCTGGAATTGAAATTTCTTAACAAGAGATCGATTTATTG

mRNA sequence

ATTATATAAGAATTATTTTTGTATTTTATTAAAAATCTATGCATTAAAATTTAACAAAGAAAATAAAATTCTCCAGCTTATGTATGAAATTTGAACCCTTAGGCCTTTCCCATGGCGAGAGATGTCAAGTCCGTCTGAAGTTCGGAACAAATCGTAAACTAAGCATGTAATCTCAAATGCAACGTATCTAAATAAAATCCAACGGTGATGTTGACGCCACGTCGATGATCCGCGTGAAAGTCCAATTAACCAATAAGAAACCACTCCATTCTTCTATATAAACTCTCCTCTGCAACATTCTCCAAAATCGTTCAATATCATTAAATCCCCCCTTGCCGTTCCCAACACCGCTAGAGCTCTTTCACCTTCATACCAACAATGGCGCCAACGAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCAGCGGAGAAAACCCCTTCCTCGGCAGAGAAGAAGCCAAAGGCTGAGAAGAAGATCGCCAAAGACAGTGGCGACAAGAAGAAGAAGAAGATCAAAAAGAGCACCGAGACTTACAAGATCTACATTTTCAAGGTTTTGAAGCAGGTTCATCCCGACATTGGAATCTCCAGCAAGGCAATGGGCATCATGAACAGTTTCATCAACGATATCTTCGAAAAACTTGCTCAAGAGGCTTCGAAATTGGCAAGATACAACAAGAAACCTACGATCACCTCACGGGAGATCCAAACCGCCGTTCGATTAGTGTTGCCTGGTGAGTTAGCGAAGCACGCTGTTTCTGAAGGAACTAAGGCCGTAACCAAATTTACAAGCTCTTAGATTCCGGTGTCGGTGAATTTTGGAATTAGGGTTTCGTTTTGGGTACTTTTTGTGTAGATCTTGGTGTCTCTCTGGTTACAGGTGTATCGAAATGCCTATAGTTTTAATGGATAACAAAGTTCTTTCTTCGGTAGATTCTCTTCTATTTTCTTTGGCAAATGCTGTGATACTTCTATCCTAATGTGAAAAATAGGGTTTGCACAGATCCGATCGTTATTGTGCTTTGGATTCGATTATAGAATACATGCATCATGATCTGGAATTGAAATTTCTTAACAAGAGATCGATTTATTG

Coding sequence (CDS)

ATGGCGCCAACGAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCAGCGGAGAAAACCCCTTCCTCGGCAGAGAAGAAGCCAAAGGCTGAGAAGAAGATCGCCAAAGACAGTGGCGACAAGAAGAAGAAGAAGATCAAAAAGAGCACCGAGACTTACAAGATCTACATTTTCAAGGTTTTGAAGCAGGTTCATCCCGACATTGGAATCTCCAGCAAGGCAATGGGCATCATGAACAGTTTCATCAACGATATCTTCGAAAAACTTGCTCAAGAGGCTTCGAAATTGGCAAGATACAACAAGAAACCTACGATCACCTCACGGGAGATCCAAACCGCCGTTCGATTAGTGTTGCCTGGTGAGTTAGCGAAGCACGCTGTTTCTGAAGGAACTAAGGCCGTAACCAAATTTACAAGCTCTTAG

Protein sequence

MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of MELO3C009279 vs. NCBI nr
Match: XP_008442575.1 (PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like [Cucumis melo var. makuwa] >TYK25065.1 histone H2B-like [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. NCBI nr
Match: XP_022958236.1 (probable histone H2B.3 [Cucurbita moschata] >XP_023005892.1 probable histone H2B.3 [Cucurbita maxima] >XP_023538865.1 probable histone H2B.3 [Cucurbita pepo subsp. pepo] >KAG6596423.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027965.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. NCBI nr
Match: XP_038903506.1 (probable histone H2B.3 [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEK PSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKAPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. NCBI nr
Match: XP_022935032.1 (probable histone H2B.3 [Cucurbita moschata] >XP_022982546.1 probable histone H2B.3 [Cucurbita maxima] >XP_023527987.1 probable histone H2B.3 [Cucurbita pepo subsp. pepo] >KAG6580565.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017318.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.1 bits (614), Expect = 5.6e-60
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKD GDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. NCBI nr
Match: XP_022145639.1 (probable histone H2B.3 [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 4.8e-59
Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKP-AEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKP AEK PSSAEKKPKAEKKI K+ GDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 140

[Close]

BLAST of MELO3C009279 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 220.7 bits (561), Expect = 1.0e-56
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD-SGDKKKKKIKKSTETYKIYIFKV 60
           M PTKAEKKPAEKKPAEK P  AEKKPKAEKKI+K+ S DKKKK+ KKS ETYKIYIFKV
Sbjct: 1   MPPTKAEKKPAEKKPAEKAP--AEKKPKAEKKISKEGSSDKKKKRTKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of MELO3C009279 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 212.2 bits (539), Expect = 3.7e-54
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSG--DKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K P  AEK PKAEKKI+KD+G  +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTS 139
           GELAKHAVSEGTKAVTKFTS
Sbjct: 121 GELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of MELO3C009279 vs. ExPASy Swiss-Prot
Match: Q9FFC0 (Histone H2B.10 OS=Arabidopsis thaliana OX=3702 GN=At5g22880 PE=1 SV=3)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 121/143 (84.62%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 5   KAEKKPAEKKPAEKTP-----SSAEKKPKAEKKIAKD---SGDKKKKKIKKSTETYKIYI 64
           KA+KKPAEKKPAEKTP     ++AEKKPKA KK+ K+   +GDKKKK+ KK+ ETYKIYI
Sbjct: 3   KADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKIYI 62

Query: 65  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLV 124
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SKLARYNKKPTITSREIQTAVRLV
Sbjct: 63  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLV 122

Query: 125 LPGELAKHAVSEGTKAVTKFTSS 140
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 LPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of MELO3C009279 vs. ExPASy Swiss-Prot
Match: O65819 (Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 9   KPAEKKPAEKTP----SSAEKKPKAEKKIAKD--SGDKKKKKIKKSTETYKIYIFKVLKQ 68
           KPAEKKPAEKTP    + AEKKPKA KK+ KD  +GDKKKK+ KK+ ETYKIYIFKVLKQ
Sbjct: 1   KPAEKKPAEKTPVAEKAPAEKKPKAGKKLPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQ 60

Query: 69  VHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELA 128
           VHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELA
Sbjct: 61  VHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 120

Query: 129 KHAVSEGTKAVTKFTSS 140
           KHAVSEGTKAVTKFTSS
Sbjct: 121 KHAVSEGTKAVTKFTSS 137

[Close]

BLAST of MELO3C009279 vs. ExPASy Swiss-Prot
Match: Q9LFF6 (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSG-DKKKKKIKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK P  AEK PKAEKKI K+ G +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           EL+KHAVSEGTKAVTKFTSS
Sbjct: 121 ELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of MELO3C009279 vs. ExPASy TrEMBL
Match: A0A5D3DN75 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. ExPASy TrEMBL
Match: A0A1S3B6N1 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. ExPASy TrEMBL
Match: A0A6J1KUE6 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. ExPASy TrEMBL
Match: A0A6J1H1K6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111459261 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. ExPASy TrEMBL
Match: A0A6J1IZM1 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKD GDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of MELO3C009279 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-55
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSG--DKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K P  AEK PKAEKKI+KD+G  +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTS 139
           GELAKHAVSEGTKAVTKFTS
Sbjct: 121 GELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of MELO3C009279 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54
Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSG-DKKKKKIKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK P  AEK PKAEKKI K+ G +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           EL+KHAVSEGTKAVTKFTSS
Sbjct: 121 ELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of MELO3C009279 vs. TAIR 10
Match: AT5G22880.1 (histone B2 )

HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54
Identity = 121/143 (84.62%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 5   KAEKKPAEKKPAEKTP-----SSAEKKPKAEKKIAKD---SGDKKKKKIKKSTETYKIYI 64
           KA+KKPAEKKPAEKTP     ++AEKKPKA KK+ K+   +GDKKKK+ KK+ ETYKIYI
Sbjct: 3   KADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKIYI 62

Query: 65  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLV 124
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SKLARYNKKPTITSREIQTAVRLV
Sbjct: 63  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLV 122

Query: 125 LPGELAKHAVSEGTKAVTKFTSS 140
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 LPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of MELO3C009279 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 6.4e-54
Identity = 125/152 (82.24%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSS---------AEKKPKAEKKIAKDS----GDKKKKKIKK 60
           MAP KA KKPAEKKPAEK P+          AEKKPKA KK+ K++     +KKKK++KK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of MELO3C009279 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53
Identity = 125/151 (82.78%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTP---------SSAEKKPKAEKKIAKDS---GDKKKKKIKKS 60
           MAP KAEKKPAEKKPA + P         + AEKKPKA KK+ K++   GDKKKK  KKS
Sbjct: 1   MAP-KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKS 60

Query: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

The following BLAST results are available for this feature:

BLAST of MELO3C009279 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442575.1	2.1e-62	100.00	PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like ...	[more]
XP_022958236.1	1.0e-61	98.56	probable histone H2B.3 [Cucurbita moschata] >XP_023005892.1 probable histone H2B...	[more]
XP_038903506.1	2.3e-61	98.56	probable histone H2B.3 [Benincasa hispida]	[more]
XP_022935032.1	5.6e-60	96.40	probable histone H2B.3 [Cucurbita moschata] >XP_022982546.1 probable histone H2B...	[more]
XP_022145639.1	4.8e-59	96.43	probable histone H2B.3 [Momordica charantia]	[more]

BLAST of MELO3C009279 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1SU99	1.0e-56	90.00	Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
Q9ZUS0	3.7e-54	87.86	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
Q9FFC0	5.3e-53	84.62	Histone H2B.10 OS=Arabidopsis thaliana OX=3702 GN=At5g22880 PE=1 SV=3	[more]
O65819	5.3e-53	87.59	Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1	[more]
Q9LFF6	5.3e-53	86.43	Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3	[more]

BLAST of MELO3C009279 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN75	1.0e-62	100.00	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 P...	[more]
A0A1S3B6N1	1.0e-62	100.00	Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1	[more]
A0A6J1KUE6	5.0e-62	98.56	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1	[more]
A0A6J1H1K6	5.0e-62	98.56	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111459261 PE=3 SV=1	[more]
A0A6J1IZM1	2.7e-60	96.40	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1	[more]

BLAST of MELO3C009279 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37470.1	2.6e-55	87.86	Histone superfamily protein	[more]
AT3G53650.1	3.8e-54	86.43	Histone superfamily protein	[more]
AT5G22880.1	3.8e-54	84.62	histone B2	[more]
AT2G28720.1	6.4e-54	82.24	Histone superfamily protein	[more]
AT5G59910.1	1.9e-53	82.78	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 123..136 score: 92.65 coord: 93..110 score: 76.51 coord: 71..91 score: 75.74 coord: 110..123 score: 92.45 coord: 52..70 score: 80.55
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 42..138 e-value: 1.3E-72 score: 257.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 5..139
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 107..129
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..139 e-value: 4.5E-60 score: 203.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..139
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 5..115 e-value: 2.6E-23 score: 82.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR23428:SF273	HISTONE H2B.4	coord: 5..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009279.1	MELO3C009279.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity