MELO3C009208 (gene) Melon (DHL92) v4

Overview
NameMELO3C009208
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionF-box protein SKIP8
Locationchr04: 32344941 .. 32346325 (-)
RNA-Seq ExpressionMELO3C009208
SyntenyMELO3C009208
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTCTGAACTTATTGTAGACGCTCTTTGAAGATAGAAGAAAAGCCCTAATAAAAGCAATTAAGTTGGTTATGCTGTAAATCTTCTCCACCATGGCACTCCGTACATCTAATTTATGCTGCAATGTGAGTTCTGCTTCTCCTCTTTCGTCTTCTCTTTCTACTTTATATCATTTTTTCTTTCTCAATTGCAGTAATTGCTGTAACGTAATCGATTCTCTCTGTTCCTTTCATGTTAGCTGTATATGGAGTTGAAATATTTTGGTGATGTTATGATTTCGTAGGATTACGTTACCTTTATCAGCAATTGGAAGAGCGTACGCTGTTCGCAGAGTTTTTCGGTGTTTCATCATGTTCCTTCAGCTCTTCCTAAGCAATGTGAAATTCGGCTGGTTAAATCGTCTAATGGAGGATCTGGATTTCTTTTGCCCACTAATCTTCGTCATGTCGTTTCAAGAGATGGAAATTTCAGTAAGTTTCCTTGAAGTTTTGTAATTTTTATGAGCCCTAATCATTTGCTTTTAAAATTTCTTTGAGCTTTTATTACTTTCCTTTATGAAATATGAACTTTCATACAGAATTTCAATTTTCTTCCAATTTCTTCAGTTAAATAGCATTTTGTTTAATATCTAGTACAGGGCCTTGCAAACAAGCATCTAGGAAGCTCTCATTTGGACCCTATCAATTGAAAGCTGAGAATTCTAGTGGTGAAAGCATCACACTTGATGCAGAAACTTTGGAGCAGGACCTTCAAAACGCCATTGCAAATGAAGACTACGCAAGAGCAGCAGAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTCTAGTATTGACAGCCAATGCTAAGTTTTACGAATCATTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTTTGGGCACGAGGAAATAGTGTTTGCTGCGTGCACCCGGGCATGAGAGGGATATCTGGGTATGACGATGTCATAACGAGCTGGGAGTATGTATGGGCAAATTATGAGTTCCCACTGGAGATTCAGCTAAAGGACATGCAAGTTCATGCACGAGGAGATGTTGGATATGTTACATGCGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACTAACGTATTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCTTCACCTATAGATTTGTAACAAAACTTTTCCAAATCATACATTTAATTCAAACGCTTCAAGAAGATTGATTTCTTTTGTATCATTCCATCATTTTCTTGGACGTCTTTTGAGTTGGGGTTGAAAATATGTGTAAACCAGTGGAGAACGAGAAGTCTGTTTTGATTTATCTACATATAAAAGGGTAATTTGGTTTCTAGTAGAGG

mRNA sequence

AGTTTCTGAACTTATTGTAGACGCTCTTTGAAGATAGAAGAAAAGCCCTAATAAAAGCAATTAAGTTGGTTATGCTGTAAATCTTCTCCACCATGGCACTCCGTACATCTAATTTATGCTGCAATGATTACGTTACCTTTATCAGCAATTGGAAGAGCGTACGCTGTTCGCAGAGTTTTTCGGTGTTTCATCATGTTCCTTCAGCTCTTCCTAAGCAATGTGAAATTCGGCTGGTTAAATCGTCTAATGGAGGATCTGGATTTCTTTTGCCCACTAATCTTCGTCATGTCGTTTCAAGAGATGGAAATTTCAGGCCTTGCAAACAAGCATCTAGGAAGCTCTCATTTGGACCCTATCAATTGAAAGCTGAGAATTCTAGTGGTGAAAGCATCACACTTGATGCAGAAACTTTGGAGCAGGACCTTCAAAACGCCATTGCAAATGAAGACTACGCAAGAGCAGCAGAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTCTAGTATTGACAGCCAATGCTAAGTTTTACGAATCATTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTTTGGGCACGAGGAAATAGTGTTTGCTGCGTGCACCCGGGCATGAGAGGGATATCTGGGTATGACGATGTCATAACGAGCTGGGAGTATGTATGGGCAAATTATGAGTTCCCACTGGAGATTCAGCTAAAGGACATGCAAGTTCATGCACGAGGAGATGTTGGATATGTTACATGCGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACTAACGTATTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCTTCACCTATAGATTTGTAACAAAACTTTTCCAAATCATACATTTAATTCAAACGCTTCAAGAAGATTGATTTCTTTTGTATCATTCCATCATTTTCTTGGACGTCTTTTGAGTTGGGGTTGAAAATATGTGTAAACCAGTGGAGAACGAGAAGTCTGTTTTGATTTATCTACATATAAAAGGGTAATTTGGTTTCTAGTAGAGG

Coding sequence (CDS)

ATGGCACTCCGTACATCTAATTTATGCTGCAATGATTACGTTACCTTTATCAGCAATTGGAAGAGCGTACGCTGTTCGCAGAGTTTTTCGGTGTTTCATCATGTTCCTTCAGCTCTTCCTAAGCAATGTGAAATTCGGCTGGTTAAATCGTCTAATGGAGGATCTGGATTTCTTTTGCCCACTAATCTTCGTCATGTCGTTTCAAGAGATGGAAATTTCAGGCCTTGCAAACAAGCATCTAGGAAGCTCTCATTTGGACCCTATCAATTGAAAGCTGAGAATTCTAGTGGTGAAAGCATCACACTTGATGCAGAAACTTTGGAGCAGGACCTTCAAAACGCCATTGCAAATGAAGACTACGCAAGAGCAGCAGAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTCTAGTATTGACAGCCAATGCTAAGTTTTACGAATCATTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTTTGGGCACGAGGAAATAGTGTTTGCTGCGTGCACCCGGGCATGAGAGGGATATCTGGGTATGACGATGTCATAACGAGCTGGGAGTATGTATGGGCAAATTATGAGTTCCCACTGGAGATTCAGCTAAAGGACATGCAAGTTCATGCACGAGGAGATGTTGGATATGTTACATGCGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACTAACGTATTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCTTCACCTATAGATTTGTAA

Protein sequence

MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHASPIDL
Homology
[Close]
BLAST of MELO3C009208 vs. NCBI nr
Match: XP_008442487.1 (PREDICTED: uncharacterized protein LOC103486341 [Cucumis melo] >KAA0044135.1 F-box protein SKIP8 [Cucumis melo var. makuwa])

HSP 1 Score: 540.8 bits (1392), Expect = 6.4e-150
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP
Sbjct: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY
Sbjct: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]
BLAST of MELO3C009208 vs. NCBI nr
Match: TYK25003.1 (F-box protein SKIP8 [Cucumis melo var. makuwa])

HSP 1 Score: 526.9 bits (1356), Expect = 9.6e-146
Identity = 255/258 (98.84%), Postives = 255/258 (98.84%), Query Frame = 0 

Query: 3   LRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTN 62
           L  SN CCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTN
Sbjct: 31  LNCSN-CCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTN 90

Query: 63  LRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYAR 122
           LRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYAR
Sbjct: 91  LRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYAR 150

Query: 123 AAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISG 182
           AAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISG
Sbjct: 151 AAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISG 210

Query: 183 YDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFE 242
           YDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFE
Sbjct: 211 YDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFE 270

Query: 243 RINGQWFICIHHASPIDL 261
           RINGQWFICIHHASPIDL
Sbjct: 271 RINGQWFICIHHASPIDL 287

[Close]
BLAST of MELO3C009208 vs. NCBI nr
Match: XP_004137747.1 (uncharacterized protein LOC101219393 [Cucumis sativus] >KGN58815.1 hypothetical protein Csa_001436 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-139
Identity = 245/260 (94.23%), Postives = 251/260 (96.54%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MAL T NLCCNDYVTFIS+ KSVRCSQSFSVFHHVPSA PKQCEIRLV SS+GGSGFLLP
Sbjct: 1   MALHTFNLCCNDYVTFISSRKSVRCSQSFSVFHHVPSAFPKQCEIRLVNSSSGGSGFLLP 60

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           +N RHV SR+GNFRPCKQASRKLSF P QLKAENSSGESITLDAETLEQDLQNAIA+EDY
Sbjct: 61  SNFRHVGSRNGNFRPCKQASRKLSFRPCQLKAENSSGESITLDAETLEQDLQNAIADEDY 120

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDDVITSWEYVWANYEFPLEIQLKD+QVHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDIQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]
BLAST of MELO3C009208 vs. NCBI nr
Match: XP_038904182.1 (uncharacterized protein LOC120090530 [Benincasa hispida] >XP_038904693.1 uncharacterized protein LOC120091000 [Benincasa hispida])

HSP 1 Score: 471.9 bits (1213), Expect = 3.7e-129
Identity = 226/260 (86.92%), Postives = 242/260 (93.08%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MAL TSNLCCND+VTFI N KSVRC Q+F+VFHH+PSALPKQCEI LVKS  GG GFL P
Sbjct: 1   MALHTSNLCCNDHVTFICNRKSVRCLQNFAVFHHLPSALPKQCEIGLVKSCRGGCGFLFP 60

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           ++LR+V SR+GNFRP KQ SR LSF P QLKAENSSGESITLDAETLEQDLQNAIA+EDY
Sbjct: 61  SSLRYVASRNGNFRPWKQTSRTLSFRPCQLKAENSSGESITLDAETLEQDLQNAIADEDY 120

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSKT VL ANAKFY+SF+TGDLA MQTLWARG+SVCCVHPGMRGI
Sbjct: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYKSFQTGDLATMQTLWARGDSVCCVHPGMRGI 180

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGY+DVITSWEYVWANYEFPLEIQLKD+QVHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYNDVITSWEYVWANYEFPLEIQLKDVQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWF+CIHHASPIDL
Sbjct: 241 FERINGQWFVCIHHASPIDL 260

[Close]
BLAST of MELO3C009208 vs. NCBI nr
Match: XP_023539336.1 (uncharacterized protein LOC111799999 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 3.9e-123
Identity = 221/260 (85.00%), Postives = 234/260 (90.00%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MAL TS+LCCN YVTFISN KSVRCSQS  VFHHVPSA PKQ +I LVK+S GG GFL P
Sbjct: 8   MALHTSSLCCNGYVTFISNRKSVRCSQSCEVFHHVPSARPKQYDIGLVKASTGGCGFLFP 67

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           +  R + S  GNFRPCK ++R LSF P QLKAENSSGESITLDAETL+QDLQNAIA+EDY
Sbjct: 68  SIPRCLGSTIGNFRPCKLSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAIADEDY 127

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSK  V  ANAKFYESFR GDLAAMQTLWARG+SVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+VITSWEYVWANYEFPLEIQLKD++VHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]
BLAST of MELO3C009208 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.0e-12
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0 

Query: 141 VLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISGYDDVITSWEYVWANYEFP 200
           +++ N +F+   R   L AM  LW   + V C+H      SGY++VI SW+  + N+E  
Sbjct: 108 IISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQG 167

Query: 201 LEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 257
            + Q+  ++     D+ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 168 FDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

[Close]
BLAST of MELO3C009208 vs. ExPASy TrEMBL
Match: A0A5A7TRW4 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004880 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.1e-150
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP
Sbjct: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY
Sbjct: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]
BLAST of MELO3C009208 vs. ExPASy TrEMBL
Match: A0A1S3B5S8 (uncharacterized protein LOC103486341 OS=Cucumis melo OX=3656 GN=LOC103486341 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.1e-150
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP
Sbjct: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY
Sbjct: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]
BLAST of MELO3C009208 vs. ExPASy TrEMBL
Match: A0A5D3DMZ3 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001210 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.6e-146
Identity = 255/258 (98.84%), Postives = 255/258 (98.84%), Query Frame = 0 

Query: 3   LRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTN 62
           L  SN CCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTN
Sbjct: 31  LNCSN-CCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLPTN 90

Query: 63  LRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYAR 122
           LRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYAR
Sbjct: 91  LRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDYAR 150

Query: 123 AAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISG 182
           AAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISG
Sbjct: 151 AAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISG 210

Query: 183 YDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFE 242
           YDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFE
Sbjct: 211 YDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFE 270

Query: 243 RINGQWFICIHHASPIDL 261
           RINGQWFICIHHASPIDL
Sbjct: 271 RINGQWFICIHHASPIDL 287

[Close]
BLAST of MELO3C009208 vs. ExPASy TrEMBL
Match: A0A0A0LA11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733200 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 8.5e-140
Identity = 245/260 (94.23%), Postives = 251/260 (96.54%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MAL T NLCCNDYVTFIS+ KSVRCSQSFSVFHHVPSA PKQCEIRLV SS+GGSGFLLP
Sbjct: 1   MALHTFNLCCNDYVTFISSRKSVRCSQSFSVFHHVPSAFPKQCEIRLVNSSSGGSGFLLP 60

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           +N RHV SR+GNFRPCKQASRKLSF P QLKAENSSGESITLDAETLEQDLQNAIA+EDY
Sbjct: 61  SNFRHVGSRNGNFRPCKQASRKLSFRPCQLKAENSSGESITLDAETLEQDLQNAIADEDY 120

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDDVITSWEYVWANYEFPLEIQLKD+QVHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDIQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]
BLAST of MELO3C009208 vs. ExPASy TrEMBL
Match: A0A6J1FUV2 (uncharacterized protein LOC111447066 OS=Cucurbita moschata OX=3662 GN=LOC111447066 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.5e-123
Identity = 221/260 (85.00%), Postives = 235/260 (90.38%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60
           MAL TS+LCCN YVTFISN KSVRCSQS  VF+HVPSALPKQ +I LVK+S GG GF+ P
Sbjct: 8   MALHTSSLCCNGYVTFISNRKSVRCSQSCEVFYHVPSALPKQYDIGLVKASIGGYGFVSP 67

Query: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120
           +  R + S  GNFRPCKQ+SR LSF P QLKAENSSGESITLDAE L+QDLQNAIA+EDY
Sbjct: 68  SIPRCLGSTIGNFRPCKQSSRMLSFRPCQLKAENSSGESITLDAEALKQDLQNAIADEDY 127

Query: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180
           ARAAEIRDTLKALQEDSK  V  ANAKFYESFR GDLAAMQTLWARG+SVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+VITSWEYVWANYEFPLEIQLKD++VHARGDVGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 261
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]
BLAST of MELO3C009208 vs. TAIR 10
Match: AT3G09250.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 254.6 bits (649), Expect = 8.6e-68
Identity = 132/262 (50.38%), Postives = 173/262 (66.03%), Query Frame = 0 

Query: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSV-FHHVPSALPKQCEIRLVKSSNGGSGFLL 60
           MAL  S + C      +SN   +      S+   H+P + P  C   +V +SN      L
Sbjct: 1   MALHGSGVFCK-----VSNMVEITSPFGGSMRLLHLPKSYPIHC--NMVSASNTFGSAHL 60

Query: 61  PTNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANED 120
               +   SR    RPC+    +          + +  ESI++D  TL+QDL+ A+  E+
Sbjct: 61  KLQNKEPCSR---LRPCRVKREE--------NNQTADVESISMDENTLKQDLETAVQEEN 120

Query: 121 YARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRG 180
           Y  AA+IRD LK LQED+K  VL+AN++FY+SFR GDLAAMQ+LW++  + CCVHPG +G
Sbjct: 121 YVEAAKIRDKLKELQEDNKASVLSANSRFYQSFRNGDLAAMQSLWSKSGNPCCVHPGAKG 180

Query: 181 ISGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKG-SSWGGQFVT 240
           I+GYD V+ SWE VW NYEFPL I+LKD++VH RG+VGYVTC+E VKTKG SSWG QFV+
Sbjct: 181 ITGYDYVMESWELVWMNYEFPLLIELKDVEVHVRGEVGYVTCMEFVKTKGSSSWGAQFVS 240

Query: 241 NVFERINGQWFICIHHASPIDL 261
           NVFERI+GQWFICIHHASP+D+
Sbjct: 241 NVFERIDGQWFICIHHASPVDI 244

[Close]
BLAST of MELO3C009208 vs. TAIR 10
Match: AT3G09250.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 228.8 bits (582), Expect = 5.0e-60
Identity = 114/216 (52.78%), Postives = 149/216 (68.98%), Query Frame = 0 

Query: 34  HVPSALPKQCEIRLVKSSNGGSGFLLPTNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAE 93
           H+P + P  C   +V +SN      L    +   SR    RPC+    +          +
Sbjct: 16  HLPKSYPIHC--NMVSASNTFGSAHLKLQNKEPCSR---LRPCRVKREE--------NNQ 75

Query: 94  NSSGESITLDAETLEQDLQNAIANEDYARAAEIRDTLKALQEDSKTLVLTANAKFYESFR 153
            +  ESI++D  TL+QDL+ A+  E+Y  AA+IRD LK LQED+K  VL+AN++FY+SFR
Sbjct: 76  TADVESISMDENTLKQDLETAVQEENYVEAAKIRDKLKELQEDNKASVLSANSRFYQSFR 135

Query: 154 TGDLAAMQTLWARGNSVCCVHPGMRGISGYDDVITSWEYVWANYEFPLEIQLKDMQVHAR 213
            GDLAAMQ+LW++  + CCVHPG +GI+GYD V+ SWE VW NYEFPL I+LKD++VH R
Sbjct: 136 NGDLAAMQSLWSKSGNPCCVHPGAKGITGYDYVMESWELVWMNYEFPLLIELKDVEVHVR 195

Query: 214 GDVGYVTCVELVKTKG-SSWGGQFVTNVFERINGQW 249
           G+VGYVTC+E VKTKG SSWG QFV+NVFERI+GQW
Sbjct: 196 GEVGYVTCMEFVKTKGSSSWGAQFVSNVFERIDGQW 218

[Close]
BLAST of MELO3C009208 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0 

Query: 141 VLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISGYDDVITSWEYVWANYEFP 200
           +++ N +F+   R   L AM  LW   + V C+H      SGY++VI SW+  + N+E  
Sbjct: 108 IISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQG 167

Query: 201 LEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 257
            + Q+  ++     D+ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 168 FDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

[Close]
BLAST of MELO3C009208 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0 

Query: 141 VLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISGYDDVITSWEYVWANYEFP 200
           +++ N +F+   R   L AM  LW   + V C+H      SGY++VI SW+  + N+E  
Sbjct: 108 IISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQG 167

Query: 201 LEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 257
            + Q+  ++     D+ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 168 FDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

[Close]
BLAST of MELO3C009208 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0 

Query: 141 VLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGISGYDDVITSWEYVWANYEFP 200
           +++ N +F+   R   L AM  LW   + V C+H      SGY++VI SW+  + N+E  
Sbjct: 108 IISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQG 167

Query: 201 LEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 257
            + Q+  ++     D+ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 168 FDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

The following BLAST results are available for this feature:
BLAST of MELO3C009208 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442487.16.4e-150100.00PREDICTED: uncharacterized protein LOC103486341 [Cucumis melo] >KAA0044135.1 F-b... [more]
TYK25003.19.6e-14698.84F-box protein SKIP8 [Cucumis melo var. makuwa][more]
XP_004137747.11.8e-13994.23uncharacterized protein LOC101219393 [Cucumis sativus] >KGN58815.1 hypothetical ... [more]
XP_038904182.13.7e-12986.92uncharacterized protein LOC120090530 [Benincasa hispida] >XP_038904693.1 unchara... [more]
XP_023539336.13.9e-12385.00uncharacterized protein LOC111799999 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C009208 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93YV95.0e-1231.90F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1[more]
BLAST of MELO3C009208 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TRW43.1e-150100.00F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G... [more]
A0A1S3B5S83.1e-150100.00uncharacterized protein LOC103486341 OS=Cucumis melo OX=3656 GN=LOC103486341 PE=... [more]
A0A5D3DMZ34.6e-14698.84F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G... [more]
A0A0A0LA118.5e-14094.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733200 PE=4 SV=1[more]
A0A6J1FUV25.5e-12385.00uncharacterized protein LOC111447066 OS=Cucurbita moschata OX=3662 GN=LOC1114470... [more]
BLAST of MELO3C009208 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G09250.18.6e-6850.38Nuclear transport factor 2 (NTF2) family protein [more]
AT3G09250.25.0e-6052.78Nuclear transport factor 2 (NTF2) family protein [more]
AT4G10925.13.5e-1331.90Nuclear transport factor 2 (NTF2) family protein [more]
AT4G10925.23.5e-1331.90Nuclear transport factor 2 (NTF2) family protein [more]
AT4G10925.33.5e-1331.90Nuclear transport factor 2 (NTF2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001943UVR domainPFAMPF02151UVRcoord: 105..135
e-value: 3.9E-7
score: 29.6
IPR001943UVR domainPROSITEPS50151UVRcoord: 101..136
score: 8.329084
NoneNo IPR availableGENE3D3.10.450.50coord: 130..259
e-value: 3.7E-40
score: 139.2
NoneNo IPR availablePANTHERPTHR34957NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEINcoord: 20..259
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 141..257
e-value: 2.9E-22
score: 79.3
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 141..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009208.1MELO3C009208.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding