MELO3C008932.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C008932.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Thioredoxin domain-containing protein
Location	chr08: 22181115 .. 22182837 (-)
RNA-Seq Expression	MELO3C008932.jh1
Synteny	MELO3C008932.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGACACAGATATGTATGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACGCACAACTTCACCAACACCAGTTTCTAAGCAACGGGAAGCGTTGTGGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCCGGCTTTTGGCCGGATTTGTCAAGACCAGCGTCGGTGGAAATGGAATCCATTGACGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAACCAATTCTTATTGATTGGTTCGTATAATTTCCTCTATCCTTTCATTCCAAGGGCTTTTTCTGTAATTTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCGAAATTACAAATTTAATCTTTTATTTTATTTTATATGGCTTAGGATTTCTAATTGGTGATTTTGTTTTTAGTTAACTGAATTTGGTTTTTTCCCTATCAAATTCAACATTTTAATAATAATAATAATATGTATATATTTAGCTATCCATTTCACTTTTAATCATTTGTTTTTATATTATGAACACATCTTTCAAACATAGATAGAACATGGCCTTCTACAATTTAGAACTGCTTCAAATTTTGAAAACTAACTTAAAAAACAAAATTTGAAAGTTTCCCCTTTTTTTAAATTGTTATAGTTACTTTCAATAATGCTTTCAGTCCTTCGAAATAAATTTTAATAATATGAAATTTTGAATTTAAATTTAAATTGATTTTGAGGGATTAAAAGTAGGTTTAGAAAAGATTTTTAAATATAATATAACTATTTCAAATCAGTTATTAAGTTAAATGAAGTGTTTTGTATTGGTGAATAATATTATAAATTAGGTGGTATGTGATATTAATATTAAACATATGGGGGAAAATAGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAGCTTGCTGCTGATTATGTTACCAAGTAACCTTCTATATGCTATCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTAATTTCTCTCTACTTCTGATATGAACACAATAATTTATGTAGTGATTAAATTTCAGAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTGTAAGTATAATCTATATAATCCTTGGAAGCTTCCTTCTTCAATTCTTTACTTTTCTAATTATTTCAATTTAACAATTGTTTTTTCTTTTTCCTTTCTGCAGAAAATGCCAACAATTCAGGTGACCACTTTTCCTTAATTTTCACTTTTAGATTAAGTTTTTACAAAAAAGAATGCTTTTAGGTGAAGTACGTTTTTTTTTTTCAATAAAAGTATGAATATGCGTATTTGAGAGTGGTACAAATGAAATTTCTTCTAAAGTTATTAATTTATTAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGCTTCATAATTTTCTGTCCACAACACTTTCTTTGTTCATTTATTATAATTACTTCATCTTCAACCTCCCCTTAACCTCAAATTTCATTCTCAAATTTTTTATTATATAATATACATCCCCATATTTGTAAAACTTTAATTTATTGTACATATATAACAATATGTTTATGTCAAATCTTGACACCTCTGTAACTTTAGGTTGTTTACACGTAATCAATCACATATGTTTCTCTTCATTGTACA

mRNA sequence

AGAGAGACACAGATATGTATGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACGCACAACTTCACCAACACCAGTTTCTAAGCAACGGGAAGCGTTGTGGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCCGGCTTTTGGCCGGATTTGTCAAGACCAGCGTCGGTGGAAATGGAATCCATTGACGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAACCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAGCTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTGTAATTATTAATTTATTAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGCTTCATAATTTTCTGTCCACAACACTTTCTTTGTTCATTTATTATAATTACTTCATCTTCAACCTCCCCTTAACCTCAAATTTCATTCTCAAATTTTTTATTATATAATATACATCCCCATATTTGTAAAACTTTAATTTATTGTACATATATAACAATATGTTTATGTCAAATCTTGACACCTCTGTAACTTTAGGTTGTTTACACGTAATCAATCACATATGTTTCTCTTCATTGTACA

Coding sequence (CDS)

ATGTATGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACGCACAACTTCACCAACACCAGTTTCTAAGCAACGGGAAGCGTTGTGGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCCGGCTTTTGGCCGGATTTGTCAAGACCAGCGTCGGTGGAAATGGAATCCATTGACGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAACCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAGCTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTGTAATTATTAATTTATTAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGA

Protein sequence

MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISVIINLLALERWRDESRSNWRAQSLACD

Homology

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BLAST of MELO3C008932.jh1 vs. NCBI nr
Match: XP_008442136.1 (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo])

HSP 1 Score: 364 bits (935), Expect = 4.46e-126
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 186
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 187 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 242
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

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BLAST of MELO3C008932.jh1 vs. NCBI nr
Match: XP_004146393.3 (thioredoxin-like 3-1, chloroplastic isoform X1 [Cucumis sativus] >KGN54788.1 hypothetical protein Csa_012348 [Cucumis sativus])

HSP 1 Score: 342 bits (878), Expect = 2.16e-117
Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           M VLGAS+SHILY  LHQH FL+N KRC FL+TDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 186
           VEMESIDDSDQLDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK KFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAKFYY 120

Query: 187 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 242
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

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BLAST of MELO3C008932.jh1 vs. NCBI nr
Match: XP_038883417.1 (thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 329 bits (843), Expect = 4.97e-112
Identity = 164/179 (91.62%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFG---DHRRRELRIKAEAGFWPDLSR 126
           M VLGA+SS ILY QLHQHQ LS GKRC FLNTDFG   D RRRELRIKAEAGFWPDLSR
Sbjct: 1   MSVLGANSSQILYRQLHQHQILSTGKRC-FLNTDFGLLGDQRRRELRIKAEAGFWPDLSR 60

Query: 127 PASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 186
           PA+VEMESIDDSD LDRILIH+QQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK
Sbjct: 61  PAAVEMESIDDSDHLDRILIHSQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120

Query: 187 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 242
           FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF S
Sbjct: 121 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 178

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BLAST of MELO3C008932.jh1 vs. NCBI nr
Match: TYK08231.1 (thioredoxin-like 3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (762), Expect = 3.79e-100
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 186
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 187 VDVNKVPQSLVKRGNISKMPTIQL 210
           VDVNKVPQSLVKRGNISKMPTIQ+
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQV 144

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BLAST of MELO3C008932.jh1 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 288 bits (736), Expect = 1.46e-95
Identity = 144/188 (76.60%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGDH------------RRRELRIK 126
           M VL AS++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 127 AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 186
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 187 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 240
           KL ADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

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BLAST of MELO3C008932.jh1 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-54
Identity = 105/166 (63.25%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 81  QLHQHQFLSNGKRCGFL-----NTDFG-DHRRRELRIKAEAGFWPDLSRPASVEMESIDD 140
           QL + + L+  K+CGF      N   G  H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 141 SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQ 200
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 166

Query: 201 SLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF 241
           +LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEVRE+I KF
Sbjct: 167 TLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINKF 209

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BLAST of MELO3C008932.jh1 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 5.4e-45
Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 102 GDHRRREL---RIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMA 161
           G  RRRE     ++AEA FW D+S+P  VEME ID  ++LD  L  + +  QPI+IDWMA
Sbjct: 55  GKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMA 114

Query: 162 TWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKA 221
           +WCRKCIYLKP+LEK+A ++   V+FY+VDVNKVPQ++VKRGNI+KMPTIQLWKDGE  A
Sbjct: 115 SWCRKCIYLKPRLEKIAGEF-PGVRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDGEWAA 174

Query: 222 EVIGGHKAWLVIEEVREMIQK 240
           EVIGGHKAWLV++EVREMIQK
Sbjct: 175 EVIGGHKAWLVMDEVREMIQK 191

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BLAST of MELO3C008932.jh1 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-35
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 105 RRRELRIKAEAGFWPDL-SRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 164
           R R + I+ + G   +L   P SVE+  I      D+++  AQ+L + ++I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 165 CIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGG 224
           CIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGG
Sbjct: 113 CIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGG 172

Query: 225 HKAWLVIEEVREMIQ 239
           HKA  V+ EVREMI+
Sbjct: 173 HKAHFVVNEVREMIE 187

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BLAST of MELO3C008932.jh1 vs. ExPASy Swiss-Prot
Match: Q1RQJ1 (Thioredoxin Asp f 28 OS=Neosartorya fumigata OX=746128 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.7e-10
Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 141 ILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRG 200
           I+  A   S P+++D+ ATWC  C  + PK+ +L+  Y + V+F  VDV+KV +S+    
Sbjct: 13  IIYKALTSSGPVVVDFFATWCGPCRAVAPKVGELSEKY-SNVRFIQVDVDKV-RSVAHEM 72

Query: 201 NISKMPTIQLWKDGE-MKAEVIGGHKAWLVIEEVREMIQKFAS 243
           NI  MPT  L+KDG+ ++  V+GG+     + E+ EMI+  ++
Sbjct: 73  NIRAMPTFVLYKDGQPLEKRVVGGN-----VRELEEMIKSISA 108

[Close]

BLAST of MELO3C008932.jh1 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09
Identity = 31/98 (31.63%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 125 ASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKF 184
           A+VE+ ++ DS+   ++L    +   P+L+++ A WC  C  + P +++LA D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 185 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIG 223
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIG 176

[Close]

BLAST of MELO3C008932.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 364 bits (935), Expect = 2.16e-126
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 186
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 187 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 242
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]

BLAST of MELO3C008932.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KZ53 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 1.05e-117
Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           M VLGAS+SHILY  LHQH FL+N KRC FL+TDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 186
           VEMESIDDSDQLDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK KFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAKFYY 120

Query: 187 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 242
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]

BLAST of MELO3C008932.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C8R2 (Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427G00010 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 1.84e-100
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 186
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 187 VDVNKVPQSLVKRGNISKMPTIQL 210
           VDVNKVPQSLVKRGNISKMPTIQ+
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQV 144

[Close]

BLAST of MELO3C008932.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 7.07e-96
Identity = 144/188 (76.60%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGDH------------RRRELRIK 126
           M VL AS++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 127 AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 186
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 187 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 240
           KL ADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

[Close]

BLAST of MELO3C008932.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 286 bits (732), Expect = 2.87e-95
Identity = 144/188 (76.60%), Postives = 157/188 (83.51%), Query Frame = 0


Query: 67  MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGDH------------RRRELRIK 126
           M VL A+++ ILY++ H  QHQ  SNG R  F+N DFG              RRREL++ 
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 127 AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 186
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 187 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 240
           KLAADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

[Close]

BLAST of MELO3C008932.jh1 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 214.5 bits (545), Expect = 9.1e-56
Identity = 105/166 (63.25%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 81  QLHQHQFLSNGKRCGFL-----NTDFG-DHRRRELRIKAEAGFWPDLSRPASVEMESIDD 140
           QL + + L+  K+CGF      N   G  H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 141 SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQ 200
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 166

Query: 201 SLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF 241
           +LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEVRE+I KF
Sbjct: 167 TLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINKF 209

[Close]

BLAST of MELO3C008932.jh1 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-36
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 105 RRRELRIKAEAGFWPDL-SRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 164
           R R + I+ + G   +L   P SVE+  I      D+++  AQ+L + ++I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 165 CIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGG 224
           CIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGG
Sbjct: 113 CIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGG 172

Query: 225 HKAWLVIEEVREMIQ 239
           HKA  V+ EVREMI+
Sbjct: 173 HKAHFVVNEVREMIE 187

[Close]

BLAST of MELO3C008932.jh1 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-36
Identity = 74/129 (57.36%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 81  QLHQHQFLSNGKRCGFL-----NTDFG-DHRRRELRIKAEAGFWPDLSRPASVEMESIDD 140
           QL + + L+  K+CGF      N   G  H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 141 SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQ 200
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 166

Query: 201 SLVKRGNIS 204
           +LVKRGNIS
Sbjct: 167 TLVKRGNIS 172

[Close]

BLAST of MELO3C008932.jh1 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10
Identity = 31/98 (31.63%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 125 ASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKF 184
           A+VE+ ++ DS+   ++L    +   P+L+++ A WC  C  + P +++LA D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 185 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIG 223
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIG 176

[Close]

BLAST of MELO3C008932.jh1 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 55.1 bits (131), Expect = 9.3e-08
Identity = 28/103 (27.18%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 136 DQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQS 195
           D  + +L+++    +P+L+D+ ATWC  C ++ P L +++     K++   +D  K P S
Sbjct: 71  DSFEDLLVNS---DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYP-S 130

Query: 196 LVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 239
           +  +  I  +PT  L+KDGE      G   A  +I+ + + ++
Sbjct: 131 IANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLK 169

The following BLAST results are available for this feature:

BLAST of MELO3C008932.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442136.1	4.46e-126	100.00	PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo]	[more]
XP_004146393.3	2.16e-117	93.75	thioredoxin-like 3-1, chloroplastic isoform X1 [Cucumis sativus] >KGN54788.1 hyp...	[more]
XP_038883417.1	4.97e-112	91.62	thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]	[more]
TYK08231.1	3.79e-100	99.31	thioredoxin-like 3-1 [Cucumis melo var. makuwa]	[more]
XP_022966464.1	1.46e-95	76.60	thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]	[more]

BLAST of MELO3C008932.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG36	1.3e-54	63.25	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	5.4e-45	65.96	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8VZT6	3.0e-35	53.33	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q1RQJ1	5.7e-10	36.89	Thioredoxin Asp f 28 OS=Neosartorya fumigata OX=746128 PE=1 SV=1	[more]
Q9SEU6	2.8e-09	31.63	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]

BLAST of MELO3C008932.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B504	2.16e-126	100.00	thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4...	[more]
A0A0A0KZ53	1.05e-117	93.75	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780...	[more]
A0A5D3C8R2	1.84e-100	99.31	Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427...	[more]
A0A6J1HTV8	7.07e-96	76.60	thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ...	[more]
A0A6J1EDU4	2.87e-95	76.60	thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232...	[more]

BLAST of MELO3C008932.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06690.1	9.1e-56	63.25	WCRKC thioredoxin 1	[more]
AT5G04260.1	2.1e-36	53.33	WCRKC thioredoxin 2	[more]
AT5G06690.2	2.8e-36	57.36	WCRKC thioredoxin 1	[more]
AT3G15360.1	2.0e-10	31.63	thioredoxin M-type 4	[more]
AT1G76760.1	9.3e-08	27.18	thioredoxin Y1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 55..146 e-value: 2.5E-16 score: 61.3
None	No IPR available	PANTHER	PTHR47192:SF3	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 1..144
None	No IPR available	CDD	cd02947	TRX_family	coord: 83..144 e-value: 2.66243E-15 score: 64.8869
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 82..144 e-value: 3.3E-13 score: 49.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 46..148 score: 9.033731
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 1..144
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 62..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008932.jh1.t2	MELO3C008932.jh1.t2	mRNA
MELO3C008932.jh1.t4	MELO3C008932.jh1.t4	mRNA
MELO3C008932.jh1.t3	MELO3C008932.jh1.t3	mRNA
MELO3C008932.jh1.t1	MELO3C008932.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma