MELO3C008381 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTGTAATATTGGCCTCCTATCTTTTCTTCCTTCTCACTGCATTTTTCTCTTTAAATCTTCCCTCTAAATTGACTGCACATTACATTCACCCATCTTCACCCACCAAACTTCGTGAATACAAACCTCCGCCACTGCCGCTGCCACGTCTGGTCTGCAGCTACGGCGCACCACCACCACCCAAATACAAGTTCCAGCCGCCACCATCGCCAGCCAAGAAAAGACACAAATTCAGGCCGCCGCCATCGCCAGCCAAGAAAAGATACAAATTCAAGCCTCCCCCACCGCCAGCCAAGAAAAGAGACAATTTCAAGTCGCCGCCATTGCCATTCATGCCGCCGCTACCACCGTCACGGCCACCACCAAAGTACAGTTGGCCACGAAAGTTCAATCGTAACTCGCCTCCACCTCCTTTCTAA ATGGGGTTTGTAATATTGGCCTCCTATCTTTTCTTCCTTCTCACTGCATTTTTCTCTTTAAATCTTCCCTCTAAATTGACTGCACATTACATTCACCCATCTTCACCCACCAAACTTCGTGAATACAAACCTCCGCCACTGCCGCTGCCACGTCTGGTCTGCAGCTACGGCGCACCACCACCACCCAAATACAAGTTCCAGCCGCCACCATCGCCAGCCAAGAAAAGACACAAATTCAGGCCGCCGCCATCGCCAGCCAAGAAAAGATACAAATTCAAGCCTCCCCCACCGCCAGCCAAGAAAAGAGACAATTTCAAGTCGCCGCCATTGCCATTCATGCCGCCGCTACCACCGTCACGGCCACCACCAAAGTACAGTTGGCCACGAAAGTTCAATCGTAACTCGCCTCCACCTCCTTTCTAA ATGGGGTTTGTAATATTGGCCTCCTATCTTTTCTTCCTTCTCACTGCATTTTTCTCTTTAAATCTTCCCTCTAAATTGACTGCACATTACATTCACCCATCTTCACCCACCAAACTTCGTGAATACAAACCTCCGCCACTGCCGCTGCCACGTCTGGTCTGCAGCTACGGCGCACCACCACCACCCAAATACAAGTTCCAGCCGCCACCATCGCCAGCCAAGAAAAGACACAAATTCAGGCCGCCGCCATCGCCAGCCAAGAAAAGATACAAATTCAAGCCTCCCCCACCGCCAGCCAAGAAAAGAGACAATTTCAAGTCGCCGCCATTGCCATTCATGCCGCCGCTACCACCGTCACGGCCACCACCAAAGTACAGTTGGCCACGAAAGTTCAATCGTAACTCGCCTCCACCTCCTTTCTAA MGFVILASYLFFLLTAFFSLNLPSKLTAHYIHPSSPTKLREYKPPPLPLPRLVCSYGAPPPPKYKFQPPPSPAKKRHKFRPPPSPAKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYSWPRKFNRNSPPPPF Homology
BLAST of MELO3C008381 vs. NCBI nr
Match: TYK29731.1 (hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 274.6 bits (701), Expect = 4.6e-70 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of MELO3C008381 vs. NCBI nr
Match: KAA0058957.1 (hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa] >TYK10990.1 hypothetical protein E5676_scaffold874G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 9.8e-12 Identity = 64/140 (45.71%), Postives = 72/140 (51.43%), Query Frame = 0
BLAST of MELO3C008381 vs. NCBI nr
Match: TXG53324.1 (hypothetical protein EZV62_022493 [Acer yangbiense]) HSP 1 Score: 78.2 bits (191), Expect = 6.4e-11 Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 0
BLAST of MELO3C008381 vs. NCBI nr
Match: XP_039691217.1 (extensin-2 [Medicago truncatula]) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of MELO3C008381 vs. NCBI nr
Match: KEH25828.1 (extensin-like region protein [Medicago truncatula]) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy Swiss-Prot
Match: Q9FS16 (Extensin-3 OS=Arabidopsis thaliana OX=3702 GN=EXT3 PE=1 SV=3) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy Swiss-Prot
Match: P06599 (Extensin OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.5e-04 Identity = 52/134 (38.81%), Postives = 64/134 (47.76%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy TrEMBL
Match: A0A5D3E2A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63236G00010 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy TrEMBL
Match: A0A0A0KI69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G336260 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.8e-15 Identity = 68/140 (48.57%), Postives = 75/140 (53.57%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy TrEMBL
Match: A0A5A7UW72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00250 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.7e-12 Identity = 64/140 (45.71%), Postives = 72/140 (51.43%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy TrEMBL
Match: A0A5C7H8Q7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022493 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 3.1e-11 Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 0
BLAST of MELO3C008381 vs. ExPASy TrEMBL
Match: A0A072U9R7 (Extensin-like region protein OS=Medicago truncatula OX=3880 GN=MTR_6g034920 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of MELO3C008381 vs. TAIR 10
Match: AT1G21310.1 (extensin 3 ) HSP 1 Score: 54.3 bits (129), Expect = 9.1e-08 Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 0
BLAST of MELO3C008381 vs. TAIR 10
Match: AT4G13390.1 (Proline-rich extensin-like family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04 Identity = 44/116 (37.93%), Postives = 54/116 (46.55%), Query Frame = 0
BLAST of MELO3C008381 vs. TAIR 10
Match: AT5G07740.1 (actin binding ) HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04 Identity = 44/111 (39.64%), Postives = 48/111 (43.24%), Query Frame = 0
BLAST of MELO3C008381 vs. TAIR 10
Match: AT4G08400.1 (Proline-rich extensin-like family protein ) HSP 1 Score: 42.0 bits (97), Expect = 4.7e-04 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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