MELO3C008311 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008311
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Flocculation protein FLO11-like
Location	chr10: 15299813 .. 15300621 (-)
RNA-Seq Expression	MELO3C008311
Synteny	MELO3C008311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTCACCACAAAAAACTGCAACTTCTTTGAAGGACAAACGCTACAAAGGAATCCCAACAAAACATCCATATAAGAAAATTCGCATGTCTGCTCCGCCTATTGAGGAAGGTCAACACTGTTCAGTACCCATCCCTGTCCATTGCTCACATGTAGGCCAATCTTCTAAACCATTATCTTCTGTTACTGTCAAAAGGGAAGTCCCTGAGTTTTGTCCACCACGCGCATCCCGACCGTCTGCGTCCTCCTCTGTACCAAAACCTAGGGTTTCTGTTGAGACAGTGGTTATAGATTTTGACTCCTTTGACAGTGAAGACAATGTGGTTTTGTCATCCCTTCTCCATTGCAAGGTAGGGTCTCGTTCTGGTCAATCCCCACCAAGGGAAGCATATCCTCTTAAGGAGGATCTGTCTCGGCCTACTGACCAGGTCATTCTTTAGCTGCTCCATCATCACCTCATGCTTCCCCACAAGCTTCTCTTTCAACTGATGAAGACGATGCAAGTAACAAAACTGACGAAGATTATGTACCTAGAACTGAAGAAACAACTGTACTTGAGGACTCTTCGACATCTACTGAGGATCTTAGTGTATCCCATGGTACTCGGATGTCGGAACCTAGGTTAACTAAAGGCCCGGATGAATTCTTCACTCCGATGTCACGTCCTGGGCATGTTGGTTCCTCCTTTAGTCTACGTCGTCTTCCTGTCAGAGGACAACGTGTCGTCTCAACCAAGGCAGGACAAAGGAAGATACCCCCACATGTACCCTCTGTGTCAATTGATGGTGTGTCTTTTCACTCTAAG

mRNA sequence

ATGGCTCCCTCACCACAAAAAACTGCAACTTCTTTGAAGGACAAACGCTACAAAGGAATCCCAACAAAACATCCATATAAGAAAATTCGCATGTCTGCTCCGCCTATTGAGGAAGGTCAACACTGTTCAGTACCCATCCCTGTCCATTGCTCACATGTAGGCCAATCTTCTAAACCATTATCTTCTGTTACTGTCAAAAGGGAAGTCCCTGAGTTTTGTCCACCACGCGCATCCCGACCGTCTGCGTCCTCCTCTGTACCAAAACCTAGGGTTTCTGTTGAGACAGTGGTTATAGATTTTGACTCCTTTGACAGTGAAGACAATGTGGTTTTGTCATCCCTTCTCCATTGCAAGGTAGGGTCTCGTTCTGGTCAATCCCCACCAAGGGAAGCATATCCTCTTAAGGAGGATCTGTCTCGGCCTACTGACCAGGTCATTCTTTAGCTGCTCCATCATCACCTCATGCTTCCCCACAAGCTTCTCTTTCAACTGATGAAGACGATGCAAGTAACAAAACTGACGAAGATTATGTACCTAGAACTGAAGAAACAACTGTACTTGAGGACTCTTCGACATCTACTGAGGATCTTAGTGTATCCCATGGTACTCGGATGTCGGAACCTAGGTTAACTAAAGGCCCGGATGAATTCTTCACTCCGATGTCACGTCCTGGGCATGTTGGTTCCTCCTTTAGTCTACGTCGTCTTCCTGTCAGAGGACAACGTGTCGTCTCAACCAAGGCAGGACAAAGGAAGATACCCCCACATGTACCCTCTGTGTCAATTGATGGTGTGTCTTTTCACTCTAAG

Coding sequence (CDS)

ATGGCTCCCTCACCACAAAAAACTGCAACTTCTTTGAAGGACAAACGCTACAAAGGAATCCCAACAAAACATCCATATAAGAAAATTCGCATGTCTGCTCCGCCTATTGAGGAAGGTCAACACTGTTCAGTACCCATCCCTGTCCATTGCTCACATGTAGGCCAATCTTCTAAACCATTATCTTCTGTTACTGTCAAAAGGGAAGTCCCTGAGTTTTGTCCACCACGCGCATCCCGACCGTCTGCGTCCTCCTCTGTACCAAAACCTAGGGTTTCTGTTGAGACAGTGGTTATAGATTTTGACTCCTTTGACAGTGAAGACAATGTGGTTTTGTCATCCCTTCTCCATTGCAAGGTAGGGTCTCGTTCTGGTCAATCCCCACCAAGGGAAGCATATCCTCTTAAGGAGGATCTGTCTCGGCCTACTGACCAGGTCATTCTTTAG

Protein sequence

MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPLSSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVGSRSGQSPPREAYPLKEDLSRPTDQVIL

Homology

[Close]

BLAST of MELO3C008311 vs. NCBI nr
Match: TYK27533.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 251.5 bits (641), Expect = 4.4e-63
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSGQS 127
           SRSG S
Sbjct: 442 SRSGHS 447

[Close]

BLAST of MELO3C008311 vs. NCBI nr
Match: KAA0050418.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 251.5 bits (641), Expect = 4.4e-63
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSGQS 127
           SRSG S
Sbjct: 442 SRSGHS 447

[Close]

BLAST of MELO3C008311 vs. NCBI nr
Match: KAA0025117.1 (hypothetical protein E6C27_scaffold124G00150 [Cucumis melo var. makuwa] >TYK19360.1 hypothetical protein E5676_scaffold3037G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-42
Identity = 100/143 (69.93%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MAP P KT    K KRYKGIPTKHPYKKI   A   EEGQHC VP  VHCSH  Q S P+
Sbjct: 689 MAPLPPKT---FKGKRYKGIPTKHPYKKICQFATLTEEGQHCHVPNLVHCSHAVQPSNPV 748

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           S VTVK+EV EF PPR +RPSA   V +PRVSVETVV+D DS DSEDNVVLS+LLH KVG
Sbjct: 749 SPVTVKKEVLEFSPPRTARPSAFFLVSEPRVSVETVVLDSDSSDSEDNVVLSTLLHRKVG 808

Query: 121 SRSGQSPPREAYPLKEDLSRPTD 144
           S SG+ PPREA P KEDL+RPTD
Sbjct: 809 SCSGKFPPREASPPKEDLTRPTD 828

[Close]

BLAST of MELO3C008311 vs. NCBI nr
Match: KAA0055022.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 3.6e-41
Identity = 98/148 (66.22%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MA SP KT TS K KRYKGIPTKHPYKKI  S PP EEGQHC VPIPVHCSH G SS P 
Sbjct: 337 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 396

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           S +TVK+EVPEF PPR S  S SSSVP+PRVS+ETVV+D DS DS+DNVVLS+LLH K  
Sbjct: 397 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-S 456

Query: 121 SRSGQSP---PREAYPLKE-DLSRPTDQ 145
           S +  SP   P+ + P  E D S  TD+
Sbjct: 457 SAAPSSPHAFPQASLPTNEDDASDETDE 483

[Close]

BLAST of MELO3C008311 vs. NCBI nr
Match: XP_008441642.1 (PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 3.6e-41
Identity = 98/148 (66.22%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MA SP KT TS K KRYKGIPTKHPYKKI  S PP EEGQHC VPIPVHCSH G SS P 
Sbjct: 162 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 221

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           S +TVK+EVPEF PPR S  S SSSVP+PRVS+ETVV+D DS DS+DNVVLS+LLH K  
Sbjct: 222 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-S 281

Query: 121 SRSGQSP---PREAYPLKE-DLSRPTDQ 145
           S +  SP   P+ + P  E D S  TD+
Sbjct: 282 SAAPSSPHAFPQASLPTNEDDASDETDE 308

[Close]

BLAST of MELO3C008311 vs. ExPASy TrEMBL
Match: A0A5D3DV20 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold742G00050 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSGQS 127
           SRSG S
Sbjct: 442 SRSGHS 447

[Close]

BLAST of MELO3C008311 vs. ExPASy TrEMBL
Match: A0A5A7U568 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00060 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL
Sbjct: 322 MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 381

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG
Sbjct: 382 SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 441

Query: 121 SRSGQS 127
           SRSG S
Sbjct: 442 SRSGHS 447

[Close]

BLAST of MELO3C008311 vs. ExPASy TrEMBL
Match: A0A5D3D7D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00140 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.3e-43
Identity = 100/143 (69.93%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MAP P KT    K KRYKGIPTKHPYKKI   A   EEGQHC VP  VHCSH  Q S P+
Sbjct: 689 MAPLPPKT---FKGKRYKGIPTKHPYKKICQFATLTEEGQHCHVPNLVHCSHAVQPSNPV 748

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           S VTVK+EV EF PPR +RPSA   V +PRVSVETVV+D DS DSEDNVVLS+LLH KVG
Sbjct: 749 SPVTVKKEVLEFSPPRTARPSAFFLVSEPRVSVETVVLDSDSSDSEDNVVLSTLLHRKVG 808

Query: 121 SRSGQSPPREAYPLKEDLSRPTD 144
           S SG+ PPREA P KEDL+RPTD
Sbjct: 809 SCSGKFPPREASPPKEDLTRPTD 828

[Close]

BLAST of MELO3C008311 vs. ExPASy TrEMBL
Match: A0A5A7UGS9 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001770 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 98/148 (66.22%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MA SP KT TS K KRYKGIPTKHPYKKI  S PP EEGQHC VPIPVHCSH G SS P 
Sbjct: 337 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 396

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           S +TVK+EVPEF PPR S  S SSSVP+PRVS+ETVV+D DS DS+DNVVLS+LLH K  
Sbjct: 397 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-S 456

Query: 121 SRSGQSP---PREAYPLKE-DLSRPTDQ 145
           S +  SP   P+ + P  E D S  TD+
Sbjct: 457 SAAPSSPHAFPQASLPTNEDDASDETDE 483

[Close]

BLAST of MELO3C008311 vs. ExPASy TrEMBL
Match: A0A1S3B3W2 (uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 98/148 (66.22%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MAPSPQKTATSLKDKRYKGIPTKHPYKKIRMSAPPIEEGQHCSVPIPVHCSHVGQSSKPL 60
           MA SP KT TS K KRYKGIPTKHPYKKI  S PP EEGQHC VPIPVHCSH G SS P 
Sbjct: 162 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 221

Query: 61  SSVTVKREVPEFCPPRASRPSASSSVPKPRVSVETVVIDFDSFDSEDNVVLSSLLHCKVG 120
           S +TVK+EVPEF PPR S  S SSSVP+PRVS+ETVV+D DS DS+DNVVLS+LLH K  
Sbjct: 222 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-S 281

Query: 121 SRSGQSP---PREAYPLKE-DLSRPTDQ 145
           S +  SP   P+ + P  E D S  TD+
Sbjct: 282 SAAPSSPHAFPQASLPTNEDDASDETDE 308

The following BLAST results are available for this feature:

BLAST of MELO3C008311 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27533.1	4.4e-63	99.21	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050418.1	4.4e-63	99.21	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0025117.1	1.9e-42	69.93	hypothetical protein E6C27_scaffold124G00150 [Cucumis melo var. makuwa] >TYK1936...	[more]
KAA0055022.1	3.6e-41	66.22	flocculation protein FLO11-like [Cucumis melo var. makuwa]	[more]
XP_008441642.1	3.6e-41	66.22	PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo]	[more]

BLAST of MELO3C008311 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DV20	2.1e-63	99.21	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7U568	2.1e-63	99.21	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3D7D8	9.3e-43	69.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UGS9	1.8e-41	66.22	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B3W2	1.8e-41	66.22	uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=...	[more]

BLAST of MELO3C008311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008311.1	MELO3C008311.1	mRNA