MELO3C008192 (gene) Melon (DHL92) v4

Overview


Name	MELO3C008192
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	general transcription factor 3C polypeptide 6-like
Location	chr03: 1790043 .. 1792206 (+)
RNA-Seq Expression	MELO3C008192
Synteny	MELO3C008192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAGCTACAATTGACTCCGCCTCTAATGCCGAGGAAGAATATGTATTGCTTGACCTTGGTGATGTATCGCTGCTTGACATTCCACCCAATGCTCCATACGTTCTATCTGTATGTTTCTGACCTACTCTAATTATCAAGTAATGAAATTTTTTCTACGAGCTAATTCTTGATCTTTAATTACTTGCTTTCAAGTTACCGTTGTTAAATTAAAATGAGTTGTTTATTAATTTCCCCTCTAAGTAGTTAAGAATAACATATTTGAATATTTAAGAATTAGACTTTAACAAGCATCAGGGGTTATTAAATTTTTATTTATGAAAGTGACGAATGCATCTACTGTAAGTTTGAAAATAAACTTTGCACTGTTATATGCTTATATGTAATCTTTGGATTAATGTTGTGTAAATTTTGACACGAGACTTAGTAGAAACTAATGTAATCTTAGGATTGTAGACCATTGTGTACTCCTTGTGAACCTAGTGTAAAGTAGTTCAACACTAGTGATAGTGTTAACCAATCTCTGTATGCAAGCATTATTGCAGACATGCTGCTGACTGCAGTAGGCCATATATAGTGTAGGATTACTGTGTAGGTTTACAAGCAAACCTAGGGTAGAGCATTGGGTTGTCATAGAAAGTATTATGACATACTTGAAGAAAACCTAGAACCTAGGATTGTATTAGCATGATATTCTGAACTGTATGAAAAAGGTTGAACTTAGTTCTTAATGAGGTGTTTAACTTTATTTTGATGCCCAAACGTTCACACCCAAACCTTATGCATAAATTCATGAATTCTATGGTGCTTAACTTGTTGTTTTGATGTTTTTAAATGGAATATTTCACAATATGTTCATGTACACGAAAAAGATTTAATTTTATAATAAAAAAATAATGTCTCCTCAATGTGTCGTACCCTACTTTTTCGAAAATTGGCATGTTGTGTCGGTGTCCATGTTTCCTAGCATATAGACGTTCGTAACTTGGTTTGATTTGAGAGAAGAGAAAATTACATTACTTGTGATGACATCTATTCAAAATAAGGTTATACTTTAACCCTGTATGCCTATATAAAAGAGAAGTAGTTAACTAGTAAATAACCTTATTACAAATTTTTTCCAACCAGGAGTAACCCCCTCCACTAGGTTTTCATGGTAGACCGATACACAAGTTGTGTATTCCTAGAGTATCGTGTGAGGGTTTGGTTCGTTTATGATTACTACGTGCAACAAGCTTTAATGAAAAAGAATATATTGTGTAATTGGGCAAGCCTTCTGTTAATTTGTATGCTTTATGTGAATGTTGATTCATTTCTTTTCCAGGGTTTGGACACCATGAATCCAGTGTTGACTATCTGCGACAAATTTAAGATGGTAAGTTGTTAATAAGATACAAGCTTTTACCTAGTGTACTTCAGCAGAACCATAATGTGTAGTCTCTTGGCATTATTGTGTTTACCATTGTTGTTAAGAGTACCTAAATTTTTACCATTTAAGGATAAGCTTCAAATGTATAGAAATTTATGTTAATACACAATGTAAATGATATTGATCTTACTCTCTTATCTTTTGGTTTGATTCAAGGCTGTTGTAGTCTATATTTTGTGATTAACAGGCATTTCTATCAAACTTCCATATAAAAATATTTGTTTGAAATCTCTTTTGTAGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACCTTTGCGGAAGGTGAGCAAATTTAAAGAAAACGTAGCCGTTTGATTTTAAAGCAAGGTTTCAAATTGTTCTTTAAGACTTTGCATAGATATTGGAAAACCAATGTCTTACACTGAATTCATGTCGTCTAATGTAGAGGAAGTCCCTGTGGTTGAAGAAGAAGCTCAGCCATCTGAAACAAATGGTTGCTCGAGAGAAGCAGCTGAACCAAAACAAGCTACCAGAAAGGAGTTAAAGGCCACTGCCTGTGTACATAAGATCCTTAAATTTAAGTTACTTGATTCTGATGTTCCAAGCCCAATATCTTAGTGCACTAAAGAGAATAATGTTATTTCATATTTGTATATATTGAGGTGTAAGTTTTATGTATAGTTTAGATGCAATGGGACTGATAAGGTAAGAATTTAGATGAGTTGTGAGTACTCATCCAAGTAAAGAGCACAGTGAAAGAGCTA

mRNA sequence

ATGGAAAAAGCTACAATTGACTCCGCCTCTAATGCCGAGGAAGAATATGTATTGCTTGACCTTGGTGATGTATCGCTGCTTGACATTCCACCCAATGCTCCATACGTTCTATCTGGTTTGGACACCATGAATCCAGTGTTGACTATCTGCGACAAATTTAAGATGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACCTTTGCGGAAGAGGAAGTCCCTGTGGTTGAAGAAGAAGCTCAGCCATCTGAAACAAATGGTTGCTCGAGAGAAGCAGCTGAACCAAAACAAGCTACCAGAAAGGAGTTAAAGGCCACTGCCTGTGTACATAAGATCCTTAAATTTAAGTTACTTGATTCTGATGTTCCAAGCCCAATATCTTAGTGCACTAAAGAGAATAATGTTATTTCATATTTGTATATATTGAGGTGTAAGTTTTATGTATAGTTTAGATGCAATGGGACTGATAAGGTAAGAATTTAGATGAGTTGTGAGTACTCATCCAAGTAAAGAGCACAGTGAAAGAGCTA

Coding sequence (CDS)

ATGGAAAAAGCTACAATTGACTCCGCCTCTAATGCCGAGGAAGAATATGTATTGCTTGACCTTGGTGATGTATCGCTGCTTGACATTCCACCCAATGCTCCATACGTTCTATCTGGTTTGGACACCATGAATCCAGTGTTGACTATCTGCGACAAATTTAAGATGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACCTTTGCGGAAGAGGAAGTCCCTGTGGTTGAAGAAGAAGCTCAGCCATCTGAAACAAATGGTTGCTCGAGAGAAGCAGCTGAACCAAAACAAGCTACCAGAAAGGAGTTAAAGGCCACTGCCTGTGTACATAAGATCCTTAAATTTAAGTTACTTGATTCTGATGTTCCAAGCCCAATATCTTAG

Protein sequence

MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYEETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLDSDVPSPIS

Homology

[Close]

BLAST of MELO3C008192 vs. NCBI nr
Match: XP_016899393.1 (PREDICTED: general transcription factor 3C polypeptide 6-like [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 3.8e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE
Sbjct: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120

Query: 121 SDVPSPIS 129
           SDVPSPIS
Sbjct: 121 SDVPSPIS 128

[Close]

BLAST of MELO3C008192 vs. NCBI nr
Match: KAA0056571.1 (general transcription factor 3C polypeptide 6-like [Cucumis melo var. makuwa] >TYK24253.1 general transcription factor 3C polypeptide 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 5.2e-60
Identity = 128/144 (88.89%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE
Sbjct: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60

Query: 61  ETIGTCLTFAE----------------EEVPVVEEEAQPSETNGCSREAAEPKQATRKEL 120
           ETIGTCLTFAE                EEVPVVEEEAQPSETNGCSREAAEPKQATRKEL
Sbjct: 61  ETIGTCLTFAEDIGKPMSYTEFMSSNVEEVPVVEEEAQPSETNGCSREAAEPKQATRKEL 120

Query: 121 KATACVHKILKFKLLDSDVPSPIS 129
           KATACVHKILKFKLLDSDVPSPIS
Sbjct: 121 KATACVHKILKFKLLDSDVPSPIS 144

[Close]

BLAST of MELO3C008192 vs. NCBI nr
Match: XP_004138617.3 (general transcription factor 3C polypeptide 6 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 118/128 (92.19%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSAS+ EEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE
Sbjct: 1   MEKATIDSASDVEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEVPVVEEEAQPSET  CSRE  EPKQAT+KELK  ACVHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVPVVEEEAQPSETLRCSREEVEPKQATKKELKLVACVHKILKFKLLD 120

Query: 121 SDVPSPIS 129
           SDVPS IS
Sbjct: 121 SDVPSSIS 128

[Close]

BLAST of MELO3C008192 vs. NCBI nr
Match: XP_038885696.1 (uncharacterized protein LOC120075999 [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-52
Identity = 112/128 (87.50%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSA + EEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNP+LTICDK KMIGEYE
Sbjct: 1   MEKATIDSACDVEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPILTICDKIKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEVPVVEEEA+PSE+N  SREAAEPKQA RKELK  A VHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVPVVEEEAEPSESNRRSREAAEPKQAPRKELKPVASVHKILKFKLLD 120

Query: 121 SDVPSPIS 129
           S VP+ IS
Sbjct: 121 SAVPNSIS 128

[Close]

BLAST of MELO3C008192 vs. NCBI nr
Match: XP_023550663.1 (uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550664.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550665.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550666.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46
Identity = 102/121 (84.30%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKA IDSAS+ EEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNP+LTICDK KMIGEYE
Sbjct: 1   MEKAAIDSASDGEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPILTICDKIKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEV +VEEEA PSETN  S +A EP QA RK+LK  A VHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVSMVEEEAVPSETNRRSEKAVEPNQAPRKDLKPVASVHKILKFKLLD 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MELO3C008192 vs. ExPASy TrEMBL
Match: A0A1S4DTV8 (general transcription factor 3C polypeptide 6-like OS=Cucumis melo OX=3656 GN=LOC103485483 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE
Sbjct: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120

Query: 121 SDVPSPIS 129
           SDVPSPIS
Sbjct: 121 SDVPSPIS 128

[Close]

BLAST of MELO3C008192 vs. ExPASy TrEMBL
Match: A0A5A7USU8 (General transcription factor 3C polypeptide 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00140 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 128/144 (88.89%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE
Sbjct: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60

Query: 61  ETIGTCLTFAE----------------EEVPVVEEEAQPSETNGCSREAAEPKQATRKEL 120
           ETIGTCLTFAE                EEVPVVEEEAQPSETNGCSREAAEPKQATRKEL
Sbjct: 61  ETIGTCLTFAEDIGKPMSYTEFMSSNVEEVPVVEEEAQPSETNGCSREAAEPKQATRKEL 120

Query: 121 KATACVHKILKFKLLDSDVPSPIS 129
           KATACVHKILKFKLLDSDVPSPIS
Sbjct: 121 KATACVHKILKFKLLDSDVPSPIS 144

[Close]

BLAST of MELO3C008192 vs. ExPASy TrEMBL
Match: A0A0A0LML8 (TFIIIC_sub6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406680 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKATIDSAS+ EEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE
Sbjct: 1   MEKATIDSASDVEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEVPVVEEEAQPSET  CSRE  EP+QAT+KELK  ACVHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVPVVEEEAQPSETLRCSREEVEPEQATKKELKLVACVHKILKFKLLD 120

Query: 121 SDVPSPIS 129
           SDVPS IS
Sbjct: 121 SDVPSSIS 128

[Close]

BLAST of MELO3C008192 vs. ExPASy TrEMBL
Match: A0A6J1FF13 (uncharacterized protein LOC111445121 OS=Cucurbita moschata OX=3662 GN=LOC111445121 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46
Identity = 100/121 (82.64%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKA IDSAS+ EEEYVL+DLGDVSLLDIPPNAPYVLSGLDTMNP+LTICDK KMIGEYE
Sbjct: 143 MEKAAIDSASDGEEEYVLIDLGDVSLLDIPPNAPYVLSGLDTMNPILTICDKIKMIGEYE 202

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEV +VEEEA PSETN  S +A EP QA R++LK  A VHKILKFKLLD
Sbjct: 203 ETIGTCLTFAEEEVSMVEEEAVPSETNRRSEKAVEPNQAPRRDLKPVASVHKILKFKLLD 262

Query: 121 S 122
           S
Sbjct: 263 S 263

[Close]

BLAST of MELO3C008192 vs. ExPASy TrEMBL
Match: A0A6J1JTZ1 (uncharacterized protein LOC111489725 OS=Cucurbita maxima OX=3661 GN=LOC111489725 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46
Identity = 100/121 (82.64%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MEKATIDSASNAEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYE 60
           MEKA IDSAS+ EEEYVL+DLGDVSLLDIPPNAPYVLSGLDTMNP+LTICDK KMIGEYE
Sbjct: 1   MEKAAIDSASDGEEEYVLIDLGDVSLLDIPPNAPYVLSGLDTMNPILTICDKIKMIGEYE 60

Query: 61  ETIGTCLTFAEEEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLD 120
           ETIGTCLTFAEEEV +VEEEA PS+TN  S +A EP QA RK+LK  A VHKILKFKLLD
Sbjct: 61  ETIGTCLTFAEEEVSMVEEEAVPSKTNRRSEKAVEPHQAPRKDLKPVASVHKILKFKLLD 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MELO3C008192 vs. TAIR 10
Match: AT3G15420.1 (Transcription factor TFIIIC, tau55-related protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.7e-19
Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 13  EEEYVLLDLGDVSL-LDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYEETIGTCLTFAE 72
           EEE+V++DL +VS  ++IP +APY LSGLDT+NPVLTI  K K++GEY ETIGTCL F+E
Sbjct: 2   EEEFVMIDLDEVSRHIEIPSDAPYTLSGLDTLNPVLTIDGKIKLVGEYIETIGTCLAFSE 61

Query: 73  EEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKL--LDSD 123
           +E     E   P                 +K ++  A +HKILKF+L  LD+D
Sbjct: 62  KEEVSASENQMPH----------------KKIIEPVAKLHKILKFRLAALDND 98

[Close]

BLAST of MELO3C008192 vs. TAIR 10
Match: AT1G80745.1 (Transcription factor TFIIIC, tau55-related protein )

HSP 1 Score: 84.0 bits (206), Expect = 9.9e-17
Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 13  EEEYVLLDLGDVSL-LDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYEETIGTCLTFAE 72
           E+E+V++DL DVS  +DIP +APY LSGLDT+NPVLTI  K K++GEY  TIGTCL F++
Sbjct: 2   EDEHVMIDLDDVSRHIDIPADAPYTLSGLDTLNPVLTIDGKMKLVGEYIATIGTCLAFSD 61

Query: 73  EEVPVVEEEAQPSETNGCSREAAEPKQATRKELKATACVHKILKFKLLDSD 123
           +                      + +   +K ++  A +HKILKF+L   D
Sbjct: 62  K---------------------GDNQTPQKKTVEPVAKLHKILKFRLAPLD 91

The following BLAST results are available for this feature:

BLAST of MELO3C008192 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899393.1	3.8e-63	100.00	PREDICTED: general transcription factor 3C polypeptide 6-like [Cucumis melo]	[more]
KAA0056571.1	5.2e-60	88.89	general transcription factor 3C polypeptide 6-like [Cucumis melo var. makuwa] >T...	[more]
XP_004138617.3	1.2e-56	92.19	general transcription factor 3C polypeptide 6 [Cucumis sativus]	[more]
XP_038885696.1	2.3e-52	87.50	uncharacterized protein LOC120075999 [Benincasa hispida]	[more]
XP_023550663.1	1.1e-46	84.30	uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MELO3C008192 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTV8	1.9e-63	100.00	general transcription factor 3C polypeptide 6-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7USU8	2.5e-60	88.89	General transcription factor 3C polypeptide 6-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0LML8	1.7e-56	91.41	TFIIIC_sub6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406680...	[more]
A0A6J1FF13	2.1e-46	82.64	uncharacterized protein LOC111445121 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JTZ1	3.5e-46	82.64	uncharacterized protein LOC111489725 OS=Cucurbita maxima OX=3661 GN=LOC111489725...	[more]

BLAST of MELO3C008192 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15420.1	4.7e-19	47.79	Transcription factor TFIIIC, tau55-related protein	[more]
AT1G80745.1	9.9e-17	43.24	Transcription factor TFIIIC, tau55-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019481	Transcription factor TFIIIC, triple barrel domain	PFAM	PF10419	TFIIIC_sub6	coord: 13..109 e-value: 1.8E-12 score: 47.0
None	No IPR available	GENE3D	2.60.40.4370		coord: 2..117 e-value: 3.0E-11 score: 45.0
IPR042771	TFIIIC subunit GTF3C6-like	PANTHER	PTHR21860	TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED	coord: 5..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008192.1	MELO3C008192.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006383	transcription by RNA polymerase III