MELO3C008021.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C008021.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionDUF3490 domain-containing protein
Locationchr08: 6729992 .. 6740149 (-)
RNA-Seq ExpressionMELO3C008021.jh1
SyntenyMELO3C008021.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTAGAGCTTGTTTTTGTTTTAGTTTTAATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGATGTAGTCGTTGCGGCGAAGAAGAACAAGAAGAAGGATTGTTGTGGTGGTGGCGGTCGAGAGGAAGAGGTTGATCAAAAGAGATGTCAAATAGAATCGTCGATTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGAAGGAGGTTGTTGTGATCATCATCATTCTTCTATTATTAACTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATATATATGAAGACTAAACCTATGATCACTAATGGTAGATTCTCTACTAAGACGATGGTCGGGAATTGATCAACGTACGTACGCGGTGGCAGTGACCGTGGCGACGGTGGTAGGTTCGACTAATTTGGAGTTTCTTTGAGCATAATTCTATGGTTAATTAATTAAAGTATACATAATCTCGTATGTTTCGAATTTTGCAACTAATTGAATTATGATCAAAGTTCACTGTTTAATACGATAAAATAACTTTGTTAATTTCAATTTTGCATATATGAAGTTTGGAGATTAAATGA

mRNA sequence

TCTCTAGAGCTTGTTTTTGTTTTAGTTTTAATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGATGTAGTCGTTGCGGCGAAGAAGAACAAGAAGAAGGATTGTTGTGGTGGTGGCGGTCGAGAGGAAGAGGTTGATCAAAAGAGATGTCAAATAGAATCGTCGATTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGAAGGAGGTTGTTGTGATCATCATCATTCTTCTATTATTAACTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATATATATGAAGACTAAACCTATGATCACTAATGGTAGATTCTCTACTAAGACGATGGTCGGGAATTGATCAACGTACGTACGCGGTGGCAGTGACCGTGGCGACGGTGGTAGGTTCGACTAATTTGGAGTTTCTTTGAGCATAATTCTATGGTTAATTAATTAAAGTATACATAATCTCGTATGTTTCGAATTTTGCAACTAATTGAATTATGATCAAAGTTCACTGTTTAATACGATAAAATAACTTTGTTAATTTCAATTTTGCATATATGAAGTTTGGAGATTAAATGA

Coding sequence (CDS)

ATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGATGTAGTCGTTGCGGCGAAGAAGAACAAGAAGAAGGATTGTTGTGGTGGTGGCGGTCGAGAGGAAGAGGTTGATCAAAAGAGATGTCAAATAGAATCGTCGATTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGAAGGAGGTTGTTGTGATCATCATCATTCTTCTATTATTAACTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATATATATGAAGACTAAACCTATGATCACTAATGGTAGATTCTCTACTAAGACGATGGTCGGGAATTGA

Protein sequence

MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQKRCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRFSTKTMVGN
Homology
BLAST of MELO3C008021.jh1 vs. NCBI nr
Match: KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 252 bits (643), Expect = 2.89e-84
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60
           MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK
Sbjct: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60

Query: 61  RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120
           RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF
Sbjct: 61  RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120

Query: 121 STKTMVGN 128
           STKTMVGN
Sbjct: 121 STKTMVGN 128

BLAST of MELO3C008021.jh1 vs. NCBI nr
Match: XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus])

HSP 1 Score: 204 bits (520), Expect = 2.00e-65
Identity = 119/135 (88.15%), Postives = 120/135 (88.89%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVA-AKKNKKKDCCGGGG-----RE 60
           MEEESSSS NSEEVLGAAQQLMQLSNDDNSSNVDVVVA AKKNKKKD  G GG     RE
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60

Query: 61  EEVDQKRCQIESSIWLKIEEIFGKD-EGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
           EEVDQKRCQIESS+WLKIEEIFGKD EG  C HHHSSIINSRPKKRRFRSIQSIYMKTKP
Sbjct: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 MITNGRFSTKTMVGN 128
            ITNGRFSTKTMVGN
Sbjct: 121 -ITNGRFSTKTMVGN 134

BLAST of MELO3C008021.jh1 vs. NCBI nr
Match: KGN48398.1 (hypothetical protein Csa_004350 [Cucumis sativus])

HSP 1 Score: 166 bits (420), Expect = 3.21e-50
Identity = 97/112 (86.61%), Postives = 98/112 (87.50%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVA-AKKNKKKDCCGGGG-----RE 60
           MEEESSSS NSEEVLGAAQQLMQLSNDDNSSNVDVVVA AKKNKKKD  G GG     RE
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60

Query: 61  EEVDQKRCQIESSIWLKIEEIFGKD-EGGCCDHHHSSIINSRPKKRRFRSIQ 105
           EEVDQKRCQIESS+WLKIEEIFGKD EG  C HHHSSIINSRPKKRRFRSIQ
Sbjct: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

BLAST of MELO3C008021.jh1 vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia])

HSP 1 Score: 131 bits (329), Expect = 2.02e-36
Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60
           MEEESS SRN EEVLGAAQQLMQLSN+D+SS+ +VV A KK   K   GG G EEEVDQK
Sbjct: 1   MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKKNNKKRGGGDGGEEEVDQK 60

Query: 61  RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120
           RCQIE+SIW KIEEIFGK+E    +   +SI   + ++ RFRSIQSIYM TKP+I N RF
Sbjct: 61  RCQIEASIWSKIEEIFGKEEEEL-EEDRNSICRPKKRRSRFRSIQSIYMTTKPII-NARF 120

Query: 121 STKTMV 126
           S   ++
Sbjct: 121 SGNRII 123

BLAST of MELO3C008021.jh1 vs. NCBI nr
Match: KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125 bits (313), Expect = 5.61e-34
Identity = 89/137 (64.96%), Postives = 98/137 (71.53%), Query Frame = 0

Query: 1   MEEESSS-SRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKK------DCCGGGGR 60
           MEEESSS SRNSEEVL AAQQL+QLSN+D+SS+ +VV A  K KKK      D  G GG 
Sbjct: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKIMKKKEDGGGDGGE 60

Query: 61  EEEVDQKRCQIESSIWLKIEEIFGKD----EGGCCDHHHSSIINSRPKKRRFRSIQSIYM 120
           EEEVDQKRCQIE+SI  KIEEIFGKD    E GC      SI   RP KRRFRSIQSIYM
Sbjct: 61  EEEVDQKRCQIETSICSKIEEIFGKDDDDDEEGC-----GSIC--RPNKRRFRSIQSIYM 120

Query: 121 KTKPMITNGRFSTKTMV 126
            TKP++ N RFS K +V
Sbjct: 121 NTKPLV-NARFSGKGIV 128

BLAST of MELO3C008021.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.40e-84
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60
           MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK
Sbjct: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60

Query: 61  RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120
           RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF
Sbjct: 61  RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120

Query: 121 STKTMVGN 128
           STKTMVGN
Sbjct: 121 STKTMVGN 128

BLAST of MELO3C008021.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 1.55e-50
Identity = 97/112 (86.61%), Postives = 98/112 (87.50%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVA-AKKNKKKDCCGGGG-----RE 60
           MEEESSSS NSEEVLGAAQQLMQLSNDDNSSNVDVVVA AKKNKKKD  G GG     RE
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60

Query: 61  EEVDQKRCQIESSIWLKIEEIFGKD-EGGCCDHHHSSIINSRPKKRRFRSIQ 105
           EEVDQKRCQIESS+WLKIEEIFGKD EG  C HHHSSIINSRPKKRRFRSIQ
Sbjct: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

BLAST of MELO3C008021.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 9.80e-37
Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0

Query: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60
           MEEESS SRN EEVLGAAQQLMQLSN+D+SS+ +VV A KK   K   GG G EEEVDQK
Sbjct: 1   MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKKNNKKRGGGDGGEEEVDQK 60

Query: 61  RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120
           RCQIE+SIW KIEEIFGK+E    +   +SI   + ++ RFRSIQSIYM TKP+I N RF
Sbjct: 61  RCQIEASIWSKIEEIFGKEEEEL-EEDRNSICRPKKRRSRFRSIQSIYMTTKPII-NARF 120

Query: 121 STKTMV 126
           S   ++
Sbjct: 121 SGNRII 123

BLAST of MELO3C008021.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1)

HSP 1 Score: 106 bits (264), Expect = 8.66e-27
Identity = 78/124 (62.90%), Postives = 86/124 (69.35%), Query Frame = 0

Query: 11  SEEVLGAAQQLMQLS-----NDDN-SSNVDVVVAAKKNKK-KDCCGG----GGREEEVDQ 70
           SEEVL AAQ LMQLS     +DDN SSNV V V   KNKK K   GG    GG EEEVDQ
Sbjct: 6   SEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAVEKMKNKKLKKGHGGDRGDGGEEEEVDQ 65

Query: 71  KRCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGR 123
           KR QIE+SIWLKIEEIFGKD+    +   +SI   RPKKRRFRS+QSIY+ TKP I NGR
Sbjct: 66  KRYQIETSIWLKIEEIFGKDDE---EQDFNSIC--RPKKRRFRSLQSIYVTTKP-IGNGR 123

BLAST of MELO3C008021.jh1 vs. ExPASy TrEMBL
Match: A0A6J5V3C5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38002 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.94e-12
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 0

Query: 12  EEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQKRCQIESSIWLK 71
           E  L AAQQLMQLS++DN++N     +++ NK     G     EEVDQ R  I   IW K
Sbjct: 17  ESELAAAQQLMQLSDEDNNNNSSSSSSSRSNKNTKHEG-----EEVDQ-RPLINVIIWAK 76

Query: 72  IEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPM 114
           IEEIFGK+E              RPKKRR+RS+ SIY+ +KP+
Sbjct: 77  IEEIFGKEEDV-----------DRPKKRRYRSLASIYLTSKPV 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0025567.12.89e-84100.00hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK1244... [more]
XP_031742655.12.00e-6588.15uncharacterized protein LOC116404425 [Cucumis sativus][more]
KGN48398.13.21e-5086.61hypothetical protein Csa_004350 [Cucumis sativus][more]
XP_022133223.12.02e-3663.49uncharacterized protein LOC111005872 [Momordica charantia][more]
KAG6595108.15.61e-3464.96hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SLI91.40e-84100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KFU11.55e-5086.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1[more]
A0A6J1BYI09.80e-3763.49uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1GFL58.66e-2762.90uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC1114537... [more]
A0A6J5V3C52.94e-1246.60Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38002 PE=4 S... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008021.jh1.t2MELO3C008021.jh1.t2mRNA
MELO3C008021.jh1.t1MELO3C008021.jh1.t1mRNA