MELO3C007317.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C007317.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 2124381 .. 2125031 (-)
RNA-Seq ExpressionMELO3C007317.jh1
SyntenyMELO3C007317.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCATTACTTAACAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCACTTAATCAGAAGCTTAGATAGATGGCGGGTACAAGGATCAACGCAATCAACGGAGGAAATTTGTCGAGGAAATATTCCGACCGTCTGATTCCAAAACGGGGTCAAGTGAAATTGGCAATCATAGTGGGTATTGCTCACTCAGTGACTTCGATATTCTCCAACGGCAGCCGGAAATGACTGTGGCGGCCGAGGAAGGGAACGAGTTAATCGGGACCGTTGAGTTGGTTTTTTGAAAAATCGACGGTCCTGATTTTCCGAGTGTGAGCGGTTCAAATTTTATCGAACGTCACAGATTAGACCCTGAGAGATCTTCCGAATTGTTAATTGAAAGAAGAGGAAGAACCCGACATGGCCTTTTTTCCATGGCGTCAATCAATTTGTGTGTGTAATTTTTTTTTTTTTTTATCTTTATTGTTTTCAAGTAGTTGTTCATTTTATGGTGCGAGTGTGTCTGTAAATTAGCAAAAGTGCTTAATTTACTGTTAAATAATAATAATAATGAAGTAATGTAAATGAAGTGTTTGAGGGAATATGGAACTCTCGTTTTTGTTTATTTTGGTTATTGAATTGAAGGGTTAAATGAAAGATTTGATT

mRNA sequence

AAGCATTACTTAACAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCACTTAATCAGAAGCTTAGATAGATGGCGGGTACAAGGATCAACGCAATCAACGGAGGAAATTTGTCGAGGAAATATTCCGACCGTCTGATTCCAAAACGGGGTCAAGTGAAATTGGCAATCATAGTGGGTATTGCTCACTCAGTGACTTCGATATTCTCCAACGGCAGCCGGAAATGACTGTGGCGGCCGAGGAAGGGAACGAGTTAATCGGGACCGTTGAGTTGGTTTTTTGAAAAATCGACGGTCCTGATTTTCCGAGTGTGAGCGGTTCAAATTTTATCGAACGTCACAGATTAGACCCTGAGAGATCTTCCGAATTGTTAATTGAAAGAAGAGGAAGAACCCGACATGGCCTTTTTTCCATGGCGTCAATCAATTTGTGTGTGTAATTTTTTTTTTTTTTTATCTTTATTGTTTTCAAGTAGTTGTTCATTTTATGGTGCGAGTGTGTCTGTAAATTAGCAAAAGTGCTTAATTTACTGTTAAATAATAATAATAATGAAGTAATGTAAATGAAGTGTTTGAGGGAATATGGAACTCTCGTTTTTGTTTATTTTGGTTATTGAATTGAAGGGTTAAATGAAAGATTTGATT

Coding sequence (CDS)

ATGGCGGGTACAAGGATCAACGCAATCAACGGAGGAAATTTGTCGAGGAAATATTCCGACCGTCTGATTCCAAAACGGGGTCAAGTGAAATTGGCAATCATAGTGGGTATTGCTCACTCAGTGACTTCGATATTCTCCAACGGCAGCCGGAAATGA

Protein sequence

MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK
Homology
BLAST of MELO3C007317.jh1 vs. NCBI nr
Match: KAG6603714.1 (hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.6 bits (205), Expect = 8.75e-19
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
           MAG  I AINGG+LSRKYSDRLIPKRGQV + I+ GIAHSVTS+FS+G RK
Sbjct: 92  MAGNSIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSLFSHGGRK 142

BLAST of MELO3C007317.jh1 vs. NCBI nr
Match: KAG8482122.1 (hypothetical protein CXB51_026793 [Gossypium anomalum])

HSP 1 Score: 68.2 bits (165), Expect = 1.22e-13
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN+SR+ + R IP+RGQVK+AII GIAHS  SIF+  SR+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIIAGIAHSFASIFTTSSRR 51

BLAST of MELO3C007317.jh1 vs. NCBI nr
Match: MBA0695347.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 67.0 bits (162), Expect = 3.26e-13
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN+SR+ + R IP+RGQVK+AI+ GIAHS  SIF+  SR+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

BLAST of MELO3C007317.jh1 vs. NCBI nr
Match: KAB2007328.1 (hypothetical protein ES319_D10G022200v1 [Gossypium barbadense] >KAG4124113.1 hypothetical protein ERO13_D10G020250v2 [Gossypium hirsutum] >TYH47800.1 hypothetical protein ES332_D10G023800v1 [Gossypium tomentosum])

HSP 1 Score: 67.0 bits (162), Expect = 3.50e-13
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN+SR+ + R IP+RGQVK+AI+ GIAHS  SIF+  SR+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

BLAST of MELO3C007317.jh1 vs. NCBI nr
Match: KAB2007330.1 (hypothetical protein ES319_D10G022400v1 [Gossypium barbadense] >KAG4124115.1 hypothetical protein ERO13_D10G020400v2 [Gossypium hirsutum] >TYG48542.1 hypothetical protein ES288_D10G023700v1 [Gossypium darwinii] >TYH47802.1 hypothetical protein ES332_D10G024000v1 [Gossypium tomentosum] >TYI59263.1 hypothetical protein E1A91_D10G023900v1 [Gossypium mustelinum])

HSP 1 Score: 67.0 bits (162), Expect = 3.50e-13
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN+SR+ + R IP+RGQVK+AI+ GIAHS  SIF+  SR+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIVAGIAHSFASIFTASSRR 51

BLAST of MELO3C007317.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KLE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.97e-24
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAGTRINAIN GNLSRK SDRLIPKRGQVKL IIVGIAHSVTSIFS+GSRK
Sbjct: 1  MAGTRINAINHGNLSRKCSDRLIPKRGQVKLGIIVGIAHSVTSIFSHGSRK 51

BLAST of MELO3C007317.jh1 vs. ExPASy TrEMBL
Match: F6GYY0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.52e-14
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN S+++S R IPKRGQVK+ I+VG+AHSV SIFS G R+
Sbjct: 1  MAGGRRAMINGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIFSLGGRR 51

BLAST of MELO3C007317.jh1 vs. ExPASy TrEMBL
Match: F6GYY1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.80e-14
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R + INGG+ S+++S R IPKRGQVK+AI VG AHSV SIFS G R+
Sbjct: 1  MAGGRGDMINGGSFSQRFSGRPIPKRGQVKVAIAVGFAHSVASIFSLGGRR 51

BLAST of MELO3C007317.jh1 vs. ExPASy TrEMBL
Match: A0A7J8Y716 (Uncharacterized protein (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_001976 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.58e-13
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN+SR+ + R IP+RGQVK+AI+ GIAHS  SIF+  SR+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

BLAST of MELO3C007317.jh1 vs. ExPASy TrEMBL
Match: A0A5D2IZC5 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G023800v1 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.69e-13
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAGTRINAINGGNLSRKYSDRLIPKRGQVKLAIIVGIAHSVTSIFSNGSRK 51
          MAG R   INGGN+SR+ + R IP+RGQVK+AI+ GIAHS  SIF+  SR+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6603714.18.75e-1976.47hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG8482122.11.22e-1362.75hypothetical protein CXB51_026793 [Gossypium anomalum][more]
MBA0695347.13.26e-1360.78hypothetical protein [Gossypium aridum][more]
KAB2007328.13.50e-1360.78hypothetical protein ES319_D10G022200v1 [Gossypium barbadense] >KAG4124113.1 hyp... [more]
KAB2007330.13.50e-1360.78hypothetical protein ES319_D10G022400v1 [Gossypium barbadense] >KAG4124115.1 hyp... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLE05.97e-2492.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1[more]
F6GYY01.52e-1464.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=... [more]
F6GYY18.80e-1464.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=... [more]
A0A7J8Y7161.58e-1360.78Uncharacterized protein (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_001976 ... [more]
A0A5D2IZC51.69e-1360.78Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G023800v1 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36615PROTEIN, PUTATIVE-RELATEDcoord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007317.jh1.t1MELO3C007317.jh1.t1mRNA