MELO3C007205.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C007205.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RING-CH-type domain-containing protein
Location	chr08: 1451407 .. 1454151 (-)
RNA-Seq Expression	MELO3C007205.jh1
Synteny	MELO3C007205.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTCACATCCAGATACTACTGCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGAAATAGAGGTATTTCACCTGGAGGAGGCCAATTGGAGCCGACCCAGATGACCAGATCTCTCTATTTTGTTGTTTTCGTTTTCAATTTATGAAGTAAACGCTTTCCCTGGAAGAAATTTCTGTATTTAAAAGTAAACTATCTACTCATTTTCTTCTTTGGAGTTTCTCCTCAGGAACAAGGCATTTATATCTTTCATTGGTGAAACAAAGTTGTAACCAAATGATGTTTCTCATGAACAGTGAAGTCTTTGGATTATAAGATGGGGCGATTCTTTTGAGTTTATTTTTCTCCCTTTTCGTGGGGGATTACCCACTTGGATTTTCGATTGAAATTTTCATTATGTATCAATTAGTTGAGTGATGCATTCTGATACTGTGGCGAGATACTAGTTTTGCGAACGAAGTATTTCAGAACAGCTTTTGCGGGAATCTGGGTTTACGAGAAAAATATATTTTGGTAAATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGTGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGACAGGATCGAGGCTACCATTGTAATTATCCCAGAAAGCGCCGCCTCTGCCGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGATACAAGGGAGGGTTCGAATCTGAATCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGTGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTATGAAGAACAGTGAAATGGGGTTGAGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTCAAGCCAAAAGGGGGTAAAGGGTTTATAGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCTTCCAACCAAGCTTCAGAGGCTAAAACTGGGACCAGTACTTCGGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGGTTCTTTCTTTTCTCTCTCTCTCTCTTCTAGTTCGATATGAAGCTAAGTACCTTTTACTTAGGATTTGGCTTGACATTTGATAAGTGTTGTGGTTTTGGTTATCTATTTTTGTTCTATCGCTTTAGCTGCTAATCCGGCCATTTCACGAATACTTTTGACTTTTATCTTTCCTCATTTGTTTTATATCTAGTCTTCTTTTGGCTCTTTTGCTTCCAAAAGGATTACCCGATTGAGTTTACTGACCTGTAGAAATAGTAAGCCCTTCCATTTCTGTAGGCACACAAAGGAAAATGAGCGTTAATGAATATGGAGGAAGAAAGTTTAAGGCTGTATCCATCCTTTTGTTGGTTTCTGTCTTATAAAAAAGTCTCCTGTAAAGTTAGTCTACCCTTGATTTTGTTTTGTGCTATCAGGTTAAATTTATCGCTGCTATACCAACTTGGTTTGTCCTTCAGGTATAGTATTGGAAAATTGTAATAAGGGTTCATCGAATTATCTCTTCCCCTAAAGCGTTTTTCTAGGTGGCATGAGCAGTTATGCAATCAATGAAATGGAGTAATGACATAAAGTTGCAATCACGTGTCTAAGGGGTTCGAATATGGTTATAGAATATTATGAAATGGTTATAAAATGTTTATTTTTATCACCTCTTTTGGTTTAAACTTTGAACTTCCCTTTTCCAGGTGTCCCTTCAACCTCTTCAAGAGGACTTTGATACTAATTCTAGACTTGGGGAGTGATATTTGATGGCTGATTGTGTTTGAACAATTCAATGATAGATTTAAGGATAATTTTTTTTCAGAGCTTTTGGCATTTCACTTAGAAACTGCCAAATGGATTGTAGAGCAAGTTGAAACGAAGTAATTTCCTTGAAGTTGAAATATGCCGCACAAGAGATTGAGTATTGAATGGTATCACATTGATAGAGTCAACTACTTGTTTCTGAGCATTTGCATGTGAAAATAAAAGGAAAAGAATCCAAAACTACGACTTGCCAATTGGCAACTCCTGTTTTTAAACTACATTGTCTTTCATATTGTCAAATGAGCCGATGATCATTTAATCATTATCATTTTGGTTAATACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTCGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAATGGAAACACATCAAACAGGGGTGGGGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAGCAAGTGTCAAAAGAAAAAAAAAAAGAAAAAAAAGAAGAATTCTTCTTTTCCCATGGAACGGTTGACGTTTTCAACTTAACTTTGTTCTAATGCTAGTTAAACCCTGTAAATCTTACGATCTTGCCAAACAGATGAATTTGTGGCTGTTTTTTGTTTTTTGTTTTTTTTTTTCAGTGCAGTTTCTGCAGCTTTTGTGTCGAGAATTGCTTGAATATTGATCCTAACTTCGCTTTTCTTGTTAGCAAAGCTTTTGTGAATGATTATGACCAATGTTTGGGTTTGTGATGATTCTGTAAG

mRNA sequence

AATGTCACATCCAGATACTACTGCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGAAATAGAGGTATTTCACCTGGAGGAGGCCAATTGGAGCCGACCCAGATGACCAGATCTCTCTATTTTGTTGTTTTCGTTTTCAATTTATGAAGTAAACGCTTTCCCTGGAAGAAATTTCTGTATTTAAAAGTAAACTATCTACTCATTTTCTTCTTTGGAGTTTCTCCTCAGGAACAAGGCATTTATATCTTTCATTGGTGAAACAAAGTTGTAACCAAATGATGTTTCTCATGAACAGTGAAGTCTTTGGATTATAAGATGGGGCGATTCTTTTGAGTTTATTTTTCTCCCTTTTCGTGGGGGATTACCCACTTGGATTTTCGATTGAAATTTTCATTATGTATCAATTAGTTGAGTGATGCATTCTGATACTGTGGCGAGATACTAGTTTTGCGAACGAAGTATTTCAGAACAGCTTTTGCGGGAATCTGGGTTTACGAGAAAAATATATTTTGGTAAATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGTGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGACAGGATCGAGGCTACCATTGTAATTATCCCAGAAAGCGCCGCCTCTGCCGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGATACAAGGGAGGGTTCGAATCTGAATCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGTGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTATGAAGAACAGTGAAATGGGGTTGAGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTCAAGCCAAAAGGGGGTAAAGGGTTTATAGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCTTCCAACCAAGCTTCAGAGGCTAAAACTGGGACCAGTACTTCGGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTCGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAATGGAAACACATCAAACAGGGGTGGGGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAGCAAGTGTCAAAAGAAAAAAAAAAAGAAAAAAAAGAAGAATTCTTCTTTTCCCATGGAACGGTTGACGTTTTCAACTTAACTTTGTTCTAATGCTAGTTAAACCCTGTAAATCTTACGATCTTGCCAAACAGATGAATTTGTGGCTGTTTTTTGTTTTTTGTTTTTTTTTTTCAGTGCAGTTTCTGCAGCTTTTGTGTCGAGAATTGCTTGAATATTGATCCTAACTTCGCTTTTCTTGTTAGCAAAGCTTTTGTGAATGATTATGACCAATGTTTGGGTTTGTGATGATTCTGTAAG

Coding sequence (CDS)

ATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGTGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGACAGGATCGAGGCTACCATTGTAATTATCCCAGAAAGCGCCGCCTCTGCCGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGATACAAGGGAGGGTTCGAATCTGAATCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGTGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTATGAAGAACAGTGAAATGGGGTTGAGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTCAAGCCAAAAGGGGGTAAAGGGTTTATAGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCTTCCAACCAAGCTTCAGAGGCTAAAACTGGGACCAGTACTTCGGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTCGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAATGGAAACACATCAAACAGGGGTGGGGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAG

Protein sequence

MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGGEAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSNRGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF

Homology

[Close]

BLAST of MELO3C007205.jh1 vs. NCBI nr
Match: XP_008439727.1 (PREDICTED: uncharacterized protein LOC103484442 [Cucumis melo])

HSP 1 Score: 555 bits (1430), Expect = 1.98e-199
Identity = 272/274 (99.27%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASA GDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASACGDKEAHGFGG 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK
Sbjct: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSE KDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC
Sbjct: 121 MSETKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

[Close]

BLAST of MELO3C007205.jh1 vs. NCBI nr
Match: XP_011658254.1 (uncharacterized protein LOC105435966 isoform X1 [Cucumis sativus] >KGN49315.1 hypothetical protein Csa_004161 [Cucumis sativus])

HSP 1 Score: 541 bits (1393), Expect = 8.65e-194
Identity = 264/274 (96.35%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVET VPKPTNDLVNGDRIEATIVIIPES ASAGGDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           EAIPNVNI+TREGSNLNPSETVLVIDSDGAASRGEDGESL+KN+ MGL KDLEKLNVKSK
Sbjct: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQ SEAKTGTSTSELIQLGCDC
Sbjct: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDS+GNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
            GGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

[Close]

BLAST of MELO3C007205.jh1 vs. NCBI nr
Match: XP_038883622.1 (uncharacterized protein LOC120074540 [Benincasa hispida])

HSP 1 Score: 508 bits (1307), Expect = 1.55e-180
Identity = 254/283 (89.75%), Postives = 263/283 (92.93%), Query Frame = 0


Query: 1   MDREERNRQDGG-DVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHG-- 60
           MDREERNR+DGG DV SR+ET  PK T DLVNGDRIEATIV+IPESAASAGGDKEAHG  
Sbjct: 1   MDREERNRRDGGGDVLSRIETGEPKLTIDLVNGDRIEATIVVIPESAASAGGDKEAHGGA 60

Query: 61  ------FGGEAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKD 120
                 F GEA PNVN +TREGSNLNPSETVLVIDSDGAAS GE+ ESL+KN+EMGLRKD
Sbjct: 61  TGTSFGFSGEASPNVNRETREGSNLNPSETVLVIDSDGAASGGENEESLVKNNEMGLRKD 120

Query: 121 LEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTS 180
           LEK+NVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGE+VCRICHLASNQASEAKTGTSTS
Sbjct: 121 LEKMNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGEKVCRICHLASNQASEAKTGTSTS 180

Query: 181 ELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRS 240
           ELIQLGCDCKDELGIAH HCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRS
Sbjct: 181 ELIQLGCDCKDELGIAHSHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRS 240

Query: 241 VDSNGNTSNRGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           VDSNGNTSNRGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 VDSNGNTSNRGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 283

[Close]

BLAST of MELO3C007205.jh1 vs. NCBI nr
Match: XP_022142056.1 (uncharacterized protein LOC111012278 [Momordica charantia])

HSP 1 Score: 449 bits (1154), Expect = 2.94e-157
Identity = 224/281 (79.72%), Postives = 240/281 (85.41%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHG--- 60
           MDREERN Q GG V+SRVE   PK   DLVNG++IE TIVIIPE  ASAGGD+EAHG   
Sbjct: 1   MDREERNPQSGGVVTSRVEAEEPKTAADLVNGEKIETTIVIIPEGDASAGGDREAHGGTA 60

Query: 61  ----FGGEAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLE 120
                GGEA+ NV+ +T E  NLNPSETVLVIDSDG AS GEDGESL KN+  GLRKD E
Sbjct: 61  TGFGSGGEAVANVDRETSECLNLNPSETVLVIDSDGVASGGEDGESLAKNNGTGLRKDSE 120

Query: 121 KLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSEL 180
           K+N+KSKMSEAK NP+L NVKPKGGK F++DWN ERVCRICHLAS+QASE KTGTSTSEL
Sbjct: 121 KMNIKSKMSEAKYNPLLTNVKPKGGKAFVEDWNRERVCRICHLASDQASEPKTGTSTSEL 180

Query: 181 IQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVD 240
           IQLGCDCKDELGI+H HCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRS D
Sbjct: 181 IQLGCDCKDELGISHSHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSAD 240

Query: 241 SNGNTSNRGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           SNGN+SNR  GCWR QPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 SNGNSSNRVEGCWRRQPFCNFLMACLVIAFVLPWFFRINIF 281

[Close]

BLAST of MELO3C007205.jh1 vs. NCBI nr
Match: XP_023518695.1 (uncharacterized protein LOC111782129 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435 bits (1119), Expect = 3.67e-152
Identity = 215/274 (78.47%), Postives = 235/274 (85.77%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREERNRQ+GG +SSRVET VPK TNDLV+ D+IE+TIVIIPE+ A  GGDK+AH  GG
Sbjct: 1   MDREERNRQEGGVISSRVETGVPKTTNDLVSSDKIESTIVIIPETTAPTGGDKDAHAPGG 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           E        TREGSNLNP ET++VIDS GAAS G DGES++KN  M   KDLEK+N+KSK
Sbjct: 61  E--------TREGSNLNPLETIVVIDSGGAASGGGDGESVVKNKGMVSGKDLEKMNLKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSEAK+NP L+NVKP  G+GF++DWNGERVCRICHLASNQASE KTGTSTSELIQLGC C
Sbjct: 121 MSEAKENPALVNVKPIEGRGFVEDWNGERVCRICHLASNQASEPKTGTSTSELIQLGCGC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGI+H HCAEAWFKLKGNR CEICGE AKN+EGVGDN FMEEWNEGRSVDS GNTSN
Sbjct: 181 KDELGISHTHCAEAWFKLKGNRTCEICGEIAKNIEGVGDNSFMEEWNEGRSVDSYGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           RGGG WRGQPFCNFLMACLVI FVLPWF RINIF
Sbjct: 241 RGGGWWRGQPFCNFLMACLVITFVLPWFLRINIF 266

[Close]

BLAST of MELO3C007205.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B025 (uncharacterized protein LOC103484442 OS=Cucumis melo OX=3656 GN=LOC103484442 PE=4 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 9.57e-200
Identity = 272/274 (99.27%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASA GDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASACGDKEAHGFGG 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK
Sbjct: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSE KDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC
Sbjct: 121 MSETKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

[Close]

BLAST of MELO3C007205.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHW6 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519670 PE=4 SV=1)

HSP 1 Score: 541 bits (1393), Expect = 4.19e-194
Identity = 264/274 (96.35%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVET VPKPTNDLVNGDRIEATIVIIPES ASAGGDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           EAIPNVNI+TREGSNLNPSETVLVIDSDGAASRGEDGESL+KN+ MGL KDLEKLNVKSK
Sbjct: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQ SEAKTGTSTSELIQLGCDC
Sbjct: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDS+GNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
            GGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

[Close]

BLAST of MELO3C007205.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CL24 (uncharacterized protein LOC111012278 OS=Momordica charantia OX=3673 GN=LOC111012278 PE=4 SV=1)

HSP 1 Score: 449 bits (1154), Expect = 1.42e-157
Identity = 224/281 (79.72%), Postives = 240/281 (85.41%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHG--- 60
           MDREERN Q GG V+SRVE   PK   DLVNG++IE TIVIIPE  ASAGGD+EAHG   
Sbjct: 1   MDREERNPQSGGVVTSRVEAEEPKTAADLVNGEKIETTIVIIPEGDASAGGDREAHGGTA 60

Query: 61  ----FGGEAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLE 120
                GGEA+ NV+ +T E  NLNPSETVLVIDSDG AS GEDGESL KN+  GLRKD E
Sbjct: 61  TGFGSGGEAVANVDRETSECLNLNPSETVLVIDSDGVASGGEDGESLAKNNGTGLRKDSE 120

Query: 121 KLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSEL 180
           K+N+KSKMSEAK NP+L NVKPKGGK F++DWN ERVCRICHLAS+QASE KTGTSTSEL
Sbjct: 121 KMNIKSKMSEAKYNPLLTNVKPKGGKAFVEDWNRERVCRICHLASDQASEPKTGTSTSEL 180

Query: 181 IQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVD 240
           IQLGCDCKDELGI+H HCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRS D
Sbjct: 181 IQLGCDCKDELGISHSHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSAD 240

Query: 241 SNGNTSNRGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           SNGN+SNR  GCWR QPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 SNGNSSNRVEGCWRRQPFCNFLMACLVIAFVLPWFFRINIF 281

[Close]

BLAST of MELO3C007205.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KX84 (uncharacterized protein LOC111497182 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497182 PE=4 SV=1)

HSP 1 Score: 427 bits (1098), Expect = 2.80e-149
Identity = 211/274 (77.01%), Postives = 232/274 (84.67%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREERNRQ+GG +SSR+ET VPK TNDLV+ D+IE+TIVIIPE+ A  GGDK+AH  G 
Sbjct: 1   MDREERNRQEGGVISSRIETGVPKTTNDLVSSDKIESTIVIIPETTAPTGGDKDAHAPGR 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           E        TREGSNLNP E ++VIDS GAAS G DGES++KN  M   KDLEK+N+KSK
Sbjct: 61  E--------TREGSNLNPLEIIVVIDSGGAASGGGDGESVVKNKGMASGKDLEKMNLKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSEAK+NP L+NVKP  G+GF++DWNGERVCRICHLASNQASE KTGTSTSELIQLGC C
Sbjct: 121 MSEAKENPALVNVKPIEGRGFVEDWNGERVCRICHLASNQASEPKTGTSTSELIQLGCGC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGI+H HCAEAWFKLKGNR CEICGE AKN+EGV DN FMEEWNEGRSVDS GNTSN
Sbjct: 181 KDELGISHTHCAEAWFKLKGNRTCEICGEIAKNIEGVVDNSFMEEWNEGRSVDSYGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           RGGG WRGQPFCNFLMACLVI FVLPWF RINIF
Sbjct: 241 RGGGWWRGQPFCNFLMACLVITFVLPWFLRINIF 266

[Close]

BLAST of MELO3C007205.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EIL4 (uncharacterized protein LOC111433701 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433701 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 1.88e-147
Identity = 210/274 (76.64%), Postives = 231/274 (84.31%), Query Frame = 0


Query: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASAGGDKEAHGFGG 60
           MDREER+RQ+GG +SSRVET VPK TNDLV+ D+IE+TIVIIPE+ A  GGDK+AH  G 
Sbjct: 1   MDREERSRQEGGVISSRVETGVPKTTNDLVSSDKIESTIVIIPETTAPTGGDKDAHAPGR 60

Query: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120
           E        TRE SNLN  ETV+VID+ GAAS G DGES++KN  M   KDLEK+N+KSK
Sbjct: 61  E--------TRESSNLNTLETVVVIDTGGAASGGGDGESVVKNKGMVSGKDLEKMNLKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180
           MSEAK+NP L+NVKP  G+GF++DWNGERVCRICHLASNQASE KTGTSTSELIQLGC C
Sbjct: 121 MSEAKENPALVNVKPIEGRGFVEDWNGERVCRICHLASNQASEPKTGTSTSELIQLGCGC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240
           KDELGI+H HCAEAWFKLKGNR CEICGE  KN+EGVGDN FMEEWNEGRSVDS GNTSN
Sbjct: 181 KDELGISHTHCAEAWFKLKGNRTCEICGEITKNIEGVGDNSFMEEWNEGRSVDSYGNTSN 240

Query: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274
           RGGG WRGQPFCNFLMACLVI FVLPWF RINIF
Sbjct: 241 RGGGWWRGQPFCNFLMACLVITFVLPWFLRINIF 266

[Close]

BLAST of MELO3C007205.jh1 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-26
Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 147 GERVCRICHLASNQASEAK--TGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMC 206
           GER+CRICH  S+Q+ EA     + + ELI++GC CK+ELG+AH HCAEAWFKL+GN +C
Sbjct: 98  GERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVC 157

Query: 207 EICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSNRGGGCWRGQPFCNFLMACLVIAFV 266
           EICG TAKNV      R ME+W+  R    +G    RG    RGQ  C F++  L I  +
Sbjct: 158 EICGCTAKNV----TVRLMEDWSGERDNTLDGR-RRRG----RGQSCCIFMVFLLTI-LL 213

Query: 267 LPWFFR 271
           L WFF+
Sbjct: 218 LHWFFK 213

[Close]

BLAST of MELO3C007205.jh1 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-26
Identity = 68/188 (36.17%), Postives = 101/188 (53.72%), Query Frame = 0


Query: 91  ASRGEDGESLMKNSEMGLRKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERV 150
           +S G DG+   + S   + K+ E +  + + S A    + I+++    +  +     ER 
Sbjct: 19  SSSGCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERD 78

Query: 151 CRICHLASNQASEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGET 210
           CRICH+ S  A+  ++G      I+LGC CK +L  AH HCAE WFK+KGN++CE+CG  
Sbjct: 79  CRICHM-SLDAANLESGVP----IELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSI 138

Query: 211 AKNVEGVGDNRFMEEWNEGRSVD-----SNGNTSNRGGGCWRGQPFCNFLMACLVIAFVL 270
           A NV G  +    E  NE   V+     ++G     G   W+G  F NFL+AC+V AFV+
Sbjct: 139 AGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVI 198

Query: 271 PWFFRINI 274
            W F  N+
Sbjct: 199 SWLFHFNV 201

[Close]

BLAST of MELO3C007205.jh1 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 9.8e-22
Identity = 55/153 (35.95%), Postives = 67/153 (43.79%), Query Frame = 0


Query: 147 GERVCRICHLASNQASEAKTGTSTSE--------------------------LIQLGCDC 206
           G R CRICHL      EA+      E                           +QLGC C
Sbjct: 77  GGRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSC 136

Query: 207 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 266
           K +LG+AH  CAE WFK+KGN  CEICG  A NV G   N         ++      T  
Sbjct: 137 KGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTHSQAAAGQSLTQT 196

Query: 267 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINI 274
              G W G+P  NFL+A +V AFV+ W F   +
Sbjct: 197 EPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of MELO3C007205.jh1 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-20
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 148 ERVCRICHLASNQASEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEIC 207
           E+ CRICHL           TS    I+LGC CKD+L +AH  CAE WFK+KG++ CEIC
Sbjct: 81  EKDCRICHLG--------VETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEIC 140

Query: 208 GETAKNVEGVGDNRFMEEWNEGRSVDSNGNT-SNRGGGC------WRGQPFCNFLMACLV 267
              A+NV G   N  +    E R + +   T +  GGG       W+ Q   N ++AC+V
Sbjct: 141 QSVARNVGGA--NEMVGSTMEERELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMV 200

Query: 268 IAFVLPWFFRINI 274
             F + W F  ++
Sbjct: 201 FGFFISWIFHFHV 203

[Close]

BLAST of MELO3C007205.jh1 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-19
Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 148 ERVCRICHLASNQASEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEIC 207
           E+ CRICHL   ++S  + G    + + LGC CKD+LG  H  CA+ WFK+KGN+ CEIC
Sbjct: 75  EKDCRICHLGL-ESSRHECG----DPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEIC 134

Query: 208 GETAKNVEGVGDNRF--------MEEWNEGRSVDSNGNTSNRGGGCWRGQPFCNFLMACL 267
              A+N   V DN          +++   G +      + +      RG  F NFL+ C+
Sbjct: 135 RSIAQNFFKV-DNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCM 194

Query: 268 VIAFVLPWFFRINI 274
           V AFV+ WFF  N+
Sbjct: 195 VCAFVISWFFHFNL 202

The following BLAST results are available for this feature:

BLAST of MELO3C007205.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439727.1	1.98e-199	99.27	PREDICTED: uncharacterized protein LOC103484442 [Cucumis melo]	[more]
XP_011658254.1	8.65e-194	96.35	uncharacterized protein LOC105435966 isoform X1 [Cucumis sativus] >KGN49315.1 hy...	[more]
XP_038883622.1	1.55e-180	89.75	uncharacterized protein LOC120074540 [Benincasa hispida]	[more]
XP_022142056.1	2.94e-157	79.72	uncharacterized protein LOC111012278 [Momordica charantia]	[more]
XP_023518695.1	3.67e-152	78.47	uncharacterized protein LOC111782129 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C007205.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C007205.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B025	9.57e-200	99.27	uncharacterized protein LOC103484442 OS=Cucumis melo OX=3656 GN=LOC103484442 PE=...	[more]
A0A0A0KHW6	4.19e-194	96.35	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G51967...	[more]
A0A6J1CL24	1.42e-157	79.72	uncharacterized protein LOC111012278 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1KX84	2.80e-149	77.01	uncharacterized protein LOC111497182 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EIL4	1.88e-147	76.64	uncharacterized protein LOC111433701 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C007205.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34200.1	2.9e-26	50.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G05830.1	2.9e-26	36.17	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	9.8e-22	35.95	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	2.4e-20	38.35	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	3.5e-19	38.06	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 150..208 e-value: 1.5E-13 score: 61.0
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 151..207 e-value: 6.8E-7 score: 29.3
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 143..214 score: 17.295513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 142..218 e-value: 9.6E-15 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 70..274
None	No IPR available	PANTHER	PTHR46214:SF8	OS01G0731800 PROTEIN	coord: 70..274
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 147..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007205.jh1.t1	MELO3C007205.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding