MELO3C007041.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C007041.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Small nuclear ribonucleoprotein-associated protein
Location	chr08: 416067 .. 420400 (-)
RNA-Seq Expression	MELO3C007041.jh1
Synteny	MELO3C007041.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCTGGAGTTCTTACTGAAACAAGAAACCCTAGGTCGCATCTCAGTTCAGGTGCTCCACATTCTTGCACAATGTCGATGTCTAAGAGTTCGAAGATGCTCCAGTATATTAATTATCGGATGAGAGTCACCATCCAAGATGGCCGCCAATTGGTTGGCAAGTTCATGGCCTTCGATCGGCACATGAACCTCGTCCTCGGCGACTGCGAGGAGTTCCGTAAGCTTCCTCCGGCTAAGGGTAAAAAGACTAACGAGGAACGTGACGAGCGTCGTACCCTTGGTCTCGTTCTTCTCCGCGGCGAAGAGGTCATTTCCATGACAGTTGAGGGTCCACCGCCTGCTGAAGAGTCCCGTGCGAAGGCCGTCAATGCTGCGGCTATGGCTGGTCCAGGTATTGGTCGTGCCGCCGGTAGGGGTATCCCGACTGCTCCTTTGGTTCAGGCGCAGCCTGGTCTTGCTGGGCCAGTTCGTGGAGTGGGTGGACCTGCTCCGGGGATGATGCAGCCTCAAATCTCTCGCCCGCCAGTACCTCAGCTCTCCGCTCCGCCGATGACATATCCGGCTGCACCCGTTATCCGTCCACCTGGTCAGATGCCGATGTTTCCTGGGCAAGCTCCACCTCCGATCGGGAGAGGTATGCCTCCTCCGGTGCCTCCACCACAATTCTCTGCAGCGAGACCAGGGGGAGCCCCGCCACAACCTTTCCCGGGTCCTCCTCAATTTGCGCAGAGACCCATGGGACCTCCACCAACCGGGCAGGTGATGAGGGGACCGCCACCACCGCCCAGGCCTGGAATGCCAGCTCCCCCGCCTCGACCTGGGATGCCTCCTCCGCCCGGTGGCGCAGTCCCTGTTTACGGACCACCTCGTCCTGGCATGCCACCTCCGCCCAACCCACAAAACCAACAGCAAAATCAACAGCAATAGAGTGGGTACGCGTCTTCATCTTTGAAAGTTTTTAGCATTACCCCTCCGGCGATCAATTCTTTTTTTGGCTATCACTAATAAACTTGCGCATCACTGATTAGTATACCGATCTGCTTTGTCACGGGATTAAAAATTTATGAGCATTATATTTAGAATGGATCGCATTTTTGGGTATGTTTCCAACTTTCCTCGTATCCCAATTTAGCTTTAGTGTCCGGTTGGTTGAGTTAGGGACTGCCTTTGAAGGTTGTGACTCTATGGAATAAGGGTTTTATTCTAACCAATCTTCGGAGCTAGTTTCTCTGGCAAGGATAAGGTCATCTGGATTGATTTCTTTCGGCTACTTTATGGTTCTTTTGCTCGAGAAAATCTACAGGATCTTCTTACGGAAATATAGGTTTCCTTGTCATAATATATATTCTTTTCTTTCATGTTCGAAGCAACGGTTGAACTTTTTCTCTTGAAAGGAACAAATATCTTATCGTCCATCTTGGCTTGATTATTTCTCTGATATTGGCCTACTCTTGGGAGTCTATCTTGGTAGTTCCATTTGCCCTTGGGAGCCCAACAAGATCTAACATTGATCGATATTGTATTTATTTCAGTTTAAAACACTATTGGTTCCCATACTCTCATTCAAGTAAAAAATTTAATTTCAGAATTTGCAACAATTCAATTTTTAAAATTTAGCTAGCCTGCAATGGTTTAGTTCTAGTGTTTCTAAAATTTGTAATGGTTTTATCCTTCTCATGAGAAATCTTATCAAGGGACAAGTGGAAGGAATGATGAGTCTTTCTTAGTTATGTAACACATTTTGCAAACAAGCTTGGTCCCTAACAGTTTATCAATGTATACGTTAGGGTACTTGCTAACAAGAATCAAGACCTGAAATATATTGAGAATTAAAGGAGAAACTACAAAATAATCCAAGTATAAAAGAACTTGGAACCTCCCTCCTGAGTGTTCTCATCCGAGCCCTAGATCACTCCACAAAATAGTCTAACCTTCACTCACTCATCCTCTTACTATTTATACAACATCATGTAACTAATTTCCAATGGTCACCCCTTAATACTAAGGTACTGATATTCCTATCTAGGCACCTAATAGTATACAAGTGAAATTTTCTATTAGATCTTAACAAGATTTACATTGTAGGGAGTAAGTTGTTACCAATGTTGAGTTACATAGTAAATTGTTATAAGTTTAAGTATAGACTAAATAGTCACATGTTAAAATTTAGAGACCAGAAGTAATTATTTTATTTTTAATTATATAACTTACATAGCCACCTCATTGATCCTTCTTGCCGGGGCACCAATATCCTTTTGGCATTCAAGGCGGCATTGAGTAATAACACCTTGGGTTTTTATAAGATGGATATATGAGTAGTTTGCTCTACGTTGATGGTACCTTATGATGAATGTGTCCAACTGTTAAGTGTTAGCAAGTATGCTATATACAATGACTGCTGGAGGAGTATACTGATTTGTGTATGTGGTTTTGAAAACCAAACTCACTTTAGTCCCCTTGTTGTTTTATTTCACACCCAAACTTTAGTATACACTGGTGGATAAATTTGGAAGTAACAGAAGGGTTCTGATTCCAAATCTTGAAACAAATAGGGGGCAGGTGGTGGAGGAAATTTCCATCTAAAACACAGCTAAAGTTACTGTGTAAGTTAATGCAAAAATATAATATACTCTGCTCAAACATACGAAGTTAAATCTTACAAATTACAATATTTGAAATCTTAAAAGATATTGAAATATTTAGTTGACTATGACCGGAAGAAGATACCATCATAATACTTTAGGATTGATCAACCTATAAGAAAATCTCTATCCCTAAAAATTTTAAATCGAACATTTTTCAGGGTTTGACTAAATATGTTTGTAAGTAAATTGACTTTATGTTTGCTAAGTTGTGATAATAATATATGATTTCTAAATAGAAATTTGGGATGGTATTGTTAATTTGCTTTGTGTTGGAGGGGTATTTTTTTCCAAGAGGATGTTTATTTCCCAACTTTCTAGTTCGTCGATAATAAGGTCTAGAAAAGTAGAGTCGTTATAGTTGGTTTCAATTGAGTCACTGACTCAGAAAATTAGCTATCATTCAAACTTGTGGCCATCTTGTGCAATGTTGTATGGTTTTTTCATAGATGTCACAAATTACTTTGTATTTCTCTCTTGATACTTTGATGGCACTTTCAAGTGTATGTCAAGATTGGTTGTTTATCCACTCTCTATCTCTAATAACTCTGTTGGTAAAATATATGCCTCTTTACAAGATCTGAATGCTTGATTGGTGTAATGAGGTGGTAAAGGCTGTTATGATCTTTAGTTTTAAAACTTTATATATTATAAATTTCTGACCATTCTAGGATTCGAAATTTTGTCCAATATTAAACATTAATGTTATCTTGCAATCTTTAATTTTGCTGTCTCTCATTTTTCAGTAACTTGATAGTTATTTGTTGCAGACATATTGCATGTGACGATGATCCGTGGAGGTCTTCAGTTGATATTATCTTGTGTTGCTTCAACCTAAGGTTCACTTGCCAGGGGCTACAGCTTGGTTCATCTCCCTGGGCCCAATCTCTCTTGGAATTTGTGTTGATGCTGTTGTAGGATTCGACAATGTACTGTTATTAGCGAATTGTGGTCCTGGTTTTGCAATTTAACCGTTAGAGATATACTTCAAATGCAAGGTTTTAATGTGAATTTCCAATTCCTAATCGCCATGTCTCTAGGTAGATACACTTGCCCCTTTCACTTTTTAATCTGTGTTAGGCATTATATAGGATTACTCAAGGACCTCAAGTCTGAATAGTACGAACTGAAGTTTCTGTATTTTGGAACCTCTCCTGTGAAAGGAGATCTACAAATTTTTTGTGTGCATGAGTTGTGTGTGTGTTCTTTTCATGAAACAAATGTACTGAGGATTAGAGAAATATAAAAGGGTAGGAAGAAGCAAACTTCTTTCCAATTAGCATGAATGTCAAGTATGCCATGTTCTGAGTGGCTCTTTGACTCTTCTTAAGCATAAACGACCTTAAACAATAATAGAGGTCTGCCCAATTGCCATGTATAAGAACCACACAATGTCTAACTTTTTGAGGCAGGTACCAACTAAGATCTAAGCTTTTAAAAGGCCAAGCTTTCAGGGATCTGGTAGTCCGCTGTTTTGTCACTGTCTATGAACAAGGCAGGATTCTTCTAGTGGACCATCTCTCTTTTGTATGTATTACATTTTATGCTTCTCTTGGTCATGGTCTGTTTAATGGAAATCCAAACCAAGTGTTGTAACTTTTAATGCAAACTATTTAATGAGAACAGTAACTATTCTGCAAAGTCTGGTTACCGTCCTCAAGAAGGGGAAATCAAAAGTGTTAGAAACATGATT

mRNA sequence

TTGCTGGAGTTCTTACTGAAACAAGAAACCCTAGGTCGCATCTCAGTTCAGGTGCTCCACATTCTTGCACAATGTCGATGTCTAAGAGTTCGAAGATGCTCCAGTATATTAATTATCGGATGAGAGTCACCATCCAAGATGGCCGCCAATTGGTTGGCAAGTTCATGGCCTTCGATCGGCACATGAACCTCGTCCTCGGCGACTGCGAGGAGTTCCGTAAGCTTCCTCCGGCTAAGGGTAAAAAGACTAACGAGGAACGTGACGAGCGTCGTACCCTTGGTCTCGTTCTTCTCCGCGGCGAAGAGGTCATTTCCATGACAGTTGAGGGTCCACCGCCTGCTGAAGAGTCCCGTGCGAAGGCCGTCAATGCTGCGGCTATGGCTGGTCCAGGTATTGGTCGTGCCGCCGGTAGGGGTATCCCGACTGCTCCTTTGGTTCAGGCGCAGCCTGGTCTTGCTGGGCCAGTTCGTGGAGTGGGTGGACCTGCTCCGGGGATGATGCAGCCTCAAATCTCTCGCCCGCCAGTACCTCAGCTCTCCGCTCCGCCGATGACATATCCGGCTGCACCCGTTATCCGTCCACCTGGTCAGATGCCGATGTTTCCTGGGCAAGCTCCACCTCCGATCGGGAGAGGTATGCCTCCTCCGGTGCCTCCACCACAATTCTCTGCAGCGAGACCAGGGGGAGCCCCGCCACAACCTTTCCCGGGTCCTCCTCAATTTGCGCAGAGACCCATGGGACCTCCACCAACCGGGCAGGTGATGAGGGGACCGCCACCACCGCCCAGGCCTGGAATGCCAGCTCCCCCGCCTCGACCTGGGATGCCTCCTCCGCCCGGTGGCGCAGTCCCTGTTTACGGACCACCTCGTCCTGGCATGCCACCTCCGCCCAACCCACAAAACCAACAGCAAAATCAACAGCAATAGAGTGGACATATTGCATGTGACGATGATCCGTGGAGGTCTTCAGTTGATATTATCTTGTGTTGCTTCAACCTAAGGTTCACTTGCCAGGGGCTACAGCTTGGTTCATCTCCCTGGGCCCAATCTCTCTTGGAATTTGTGTTGATGCTGTTGTAGGATTCGACAATGTACTGTTATTAGCGAATTGTGGTCCTGGTTTTGCAATTTAACCGTTAGAGATATACTTCAAATGCAAGGTTTTAATGTGAATTTCCAATTCCTAATCGCCATGTCTCTAGGTAGATACACTTGCCCCTTTCACTTTTTAATCTGTGTTAGGCATTATATAGGATTACTCAAGGACCTCAAGTCTGAATAGTACGAACTGAAGTTTCTGTATTTTGGAACCTCTCCTGTGAAAGGAGATCTACAAATTTTTTGTGTGCATGAGTTGTGTGTGTGTTCTTTTCATGAAACAAATGTACTGAGGATTAGAGAAATATAAAAGGGTAGGAAGAAGCAAACTTCTTTCCAATTAGCATGAATGTCAAGTATGCCATGTTCTGAGTGGCTCTTTGACTCTTCTTAAGCATAAACGACCTTAAACAATAATAGAGGTCTGCCCAATTGCCATGTATAAGAACCACACAATGTCTAACTTTTTGAGGCAGGTACCAACTAAGATCTAAGCTTTTAAAAGGCCAAGCTTTCAGGGATCTGGTAGTCCGCTGTTTTGTCACTGTCTATGAACAAGGCAGGATTCTTCTAGTGGACCATCTCTCTTTTGTATGTATTACATTTTATGCTTCTCTTGGTCATGGTCTGTTTAATGGAAATCCAAACCAAGTGTTGTAACTTTTAATGCAAACTATTTAATGAGAACAGTAACTATTCTGCAAAGTCTGGTTACCGTCCTCAAGAAGGGGAAATCAAAAGTGTTAGAAACATGATT

Coding sequence (CDS)

ATGTCGATGTCTAAGAGTTCGAAGATGCTCCAGTATATTAATTATCGGATGAGAGTCACCATCCAAGATGGCCGCCAATTGGTTGGCAAGTTCATGGCCTTCGATCGGCACATGAACCTCGTCCTCGGCGACTGCGAGGAGTTCCGTAAGCTTCCTCCGGCTAAGGGTAAAAAGACTAACGAGGAACGTGACGAGCGTCGTACCCTTGGTCTCGTTCTTCTCCGCGGCGAAGAGGTCATTTCCATGACAGTTGAGGGTCCACCGCCTGCTGAAGAGTCCCGTGCGAAGGCCGTCAATGCTGCGGCTATGGCTGGTCCAGGTATTGGTCGTGCCGCCGGTAGGGGTATCCCGACTGCTCCTTTGGTTCAGGCGCAGCCTGGTCTTGCTGGGCCAGTTCGTGGAGTGGGTGGACCTGCTCCGGGGATGATGCAGCCTCAAATCTCTCGCCCGCCAGTACCTCAGCTCTCCGCTCCGCCGATGACATATCCGGCTGCACCCGTTATCCGTCCACCTGGTCAGATGCCGATGTTTCCTGGGCAAGCTCCACCTCCGATCGGGAGAGGTATGCCTCCTCCGGTGCCTCCACCACAATTCTCTGCAGCGAGACCAGGGGGAGCCCCGCCACAACCTTTCCCGGGTCCTCCTCAATTTGCGCAGAGACCCATGGGACCTCCACCAACCGGGCAGGTGATGAGGGGACCGCCACCACCGCCCAGGCCTGGAATGCCAGCTCCCCCGCCTCGACCTGGGATGCCTCCTCCGCCCGGTGGCGCAGTCCCTGTTTACGGACCACCTCGTCCTGGCATGCCACCTCCGCCCAACCCACAAAACCAACAGCAAAATCAACAGCAATAG

Protein sequence

MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAPPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ

Homology

[Close]

BLAST of MELO3C007041.jh1 vs. NCBI nr
Match: XP_008439504.1 (PREDICTED: small nuclear ribonucleoprotein-associated proteins B and B' [Cucumis melo])

HSP 1 Score: 524 bits (1349), Expect = 9.54e-187
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. NCBI nr
Match: XP_004134546.1 (small nuclear ribonucleoprotein-associated protein B' [Cucumis sativus] >KGN49496.1 hypothetical protein Csa_003303 [Cucumis sativus])

HSP 1 Score: 522 bits (1344), Expect = 5.51e-186
Identity = 282/284 (99.30%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAP+IRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPIIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPPIGRGMPPPVPPPQFS ARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPIGRGMPPPVPPPQFSGARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. NCBI nr
Match: KAA0052454.1 (small nuclear ribonucleoprotein-associated proteins B and B' [Cucumis melo var. makuwa] >TYK13368.1 small nuclear ribonucleoprotein-associated proteins B and B' [Cucumis melo var. makuwa])

HSP 1 Score: 521 bits (1341), Expect = 1.47e-185
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 3   MSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEE 62
           MSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEE
Sbjct: 1   MSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEE 60

Query: 63  RDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLV 122
           RDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLV
Sbjct: 61  RDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLV 120

Query: 123 QAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAP 182
           QAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAP
Sbjct: 121 QAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAP 180

Query: 183 PPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGM 242
           PPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGM
Sbjct: 181 PPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGM 240

Query: 243 PAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           PAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 PAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 282

[Close]

BLAST of MELO3C007041.jh1 vs. NCBI nr
Match: XP_038882444.1 (small nuclear ribonucleoprotein-associated protein B'-like [Benincasa hispida] >XP_038882445.1 small nuclear ribonucleoprotein-associated protein B'-like [Benincasa hispida])

HSP 1 Score: 520 bits (1339), Expect = 3.19e-185
Identity = 282/284 (99.30%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPP+GRGMPPPVPPPQFSAARPGGAPPQPFP PPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPVGRGMPPPVPPPQFSAARPGGAPPQPFPVPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. NCBI nr
Match: XP_022925730.1 (small nuclear ribonucleoprotein-associated protein B'-like [Cucurbita moschata] >XP_023544574.1 small nuclear ribonucleoprotein-associated protein B'-like [Cucurbita pepo subsp. pepo] >KAG6581498.1 Small nuclear ribonucleoprotein-associated protein B', partial [Cucurbita argyrosperma subsp. sororia] >KAG7034787.1 Small nuclear ribonucleoprotein-associated protein B', partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 514 bits (1323), Expect = 8.75e-183
Identity = 279/284 (98.24%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPP+GRGMPPP PPPQFSAARPGGAPPQPFP PPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPVGRGMPPPGPPPQFSAARPGGAPPQPFPVPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVP+YGPPRPGMPPPP PQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPIYGPPRPGMPPPPAPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy Swiss-Prot
Match: Q9N1Q0 (Small nuclear ribonucleoprotein-associated protein B' OS=Macropus eugenii OX=9315 GN=SNRPB PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.4e-45
Identity = 135/258 (52.33%), Postives = 161/258 (62.40%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           M++ KSSKMLQ+I+YRMR  +QDGR  +G F AFD+HMNL+L DC+EFRK+ P   K+  
Sbjct: 1   MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA- 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPT-A 120
            ER+E+R LGLVLLRGE ++SMTVEGPPP +   A+   + A  GPGIGRAAGRG+P   
Sbjct: 61  -EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLSGAAGGPGIGRAAGRGVPAGV 120

Query: 121 PLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPG 180
           P+ QA  GLAGPVRGVGGP+  +M PQ         +A   +   AP   PPG+     G
Sbjct: 121 PMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQHPPGR-----G 180

Query: 181 QAPPPIGRGMPPP---VPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPP 240
             PPP+GRG PPP    PPP     RP   PP    G P     PMG PP G  MR    
Sbjct: 181 GPPPPMGRGRPPPGMMAPPP---GMRPPMGPP---TGMPPGRGAPMGIPPPG--MR---- 238

Query: 241 PPRPGMPAPPPRPGMPPP 255
           PP PGM  PPP PGM PP
Sbjct: 241 PPPPGMRGPPP-PGMRPP 238

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy Swiss-Prot
Match: P14678 (Small nuclear ribonucleoprotein-associated proteins B and B' OS=Homo sapiens OX=9606 GN=SNRPB PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43
Identity = 135/273 (49.45%), Postives = 161/273 (58.97%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           M++ KSSKMLQ+I+YRMR  +QDGR  +G F AFD+HMNL+L DC+EFRK+ P   K+  
Sbjct: 1   MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA- 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPT-A 120
            ER+E+R LGLVLLRGE ++SMTVEGPPP +   A+   A A  GPGIGRAAGRGIP   
Sbjct: 61  -EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGV 120

Query: 121 PLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPG 180
           P+ QA  GLAGPVRGVGGP+  +M PQ         +A   +   AP   PPG+     G
Sbjct: 121 PMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGR-----G 180

Query: 181 QAPPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPR 240
             PPP+GRG PPP                    GPP   + PMGPP           PP 
Sbjct: 181 GPPPPMGRGAPPP-----------------GMMGPPPGMRPPMGPP--------MGIPPG 238

Query: 241 PGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPP 273
            G P   P PGM PPP G   + GPP PGM PP
Sbjct: 241 RGTPMGMPPPGMRPPPPG---MRGPPPPGMRPP 238

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy Swiss-Prot
Match: Q17QN3 (Small nuclear ribonucleoprotein-associated protein N OS=Bos taurus OX=9913 GN=SNRPN PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-43
Identity = 134/273 (49.08%), Postives = 161/273 (58.97%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           M++ KSSKMLQ+I+YRMR  +QDGR  +G F AFD+HMNL+L DC+EFRK+ P   K+  
Sbjct: 1   MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQ-- 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPT-A 120
            ER+E+R LGLVLLRGE ++SMTVEGPPP +   A+   A A  GPG+GRAAGRG+P   
Sbjct: 61  PEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGV 120

Query: 121 PLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPG 180
           P+ QA  GLAGPVRGVGGP+  +M PQ          A   +   AP   PPG+     G
Sbjct: 121 PIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGR-----G 180

Query: 181 QAPPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPR 240
            AP P+GR      PPP   A  PG  PP    GP      P+G PPT            
Sbjct: 181 TAPTPVGRA----TPPPGIMAPPPGMRPPM---GP------PIGLPPT------------ 238

Query: 241 PGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPP 273
            G P   P PGM PPP G   + GPP PGM PP
Sbjct: 241 RGTPIGMPPPGMRPPPPG---IRGPPPPGMRPP 238

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy Swiss-Prot
Match: Q9TU67 (Small nuclear ribonucleoprotein-associated protein B' OS=Erinaceus europaeus OX=9365 GN=SNRPB PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.5e-43
Identity = 134/273 (49.08%), Postives = 161/273 (58.97%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           M++ KSSKMLQ+I+YRMR  +QDGR  +G F AFD+HMNL+L DC+EFRK+ P   K+  
Sbjct: 1   MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA- 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPT-A 120
            ER+E+R LGLVLLRGE ++SMTVEGPPP +   A+   A A  GPGIGRAAGRGIP   
Sbjct: 61  -EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGV 120

Query: 121 PLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPG 180
           P+ QA  GLAGPVRGVGGP+  +M PQ         +A   +   AP   PPG+     G
Sbjct: 121 PMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGR-----G 180

Query: 181 QAPPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPR 240
             PPP+GRG PPP                    GPP   + PMGPP           PP 
Sbjct: 181 GPPPPMGRGAPPP-----------------GMMGPPPGMRPPMGPP--------MGIPPG 238

Query: 241 PGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPP 273
            G P   P PGM PPP G   + GPP PG+ PP
Sbjct: 241 RGTPMGMPPPGMRPPPPG---MRGPPPPGLRPP 238

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy Swiss-Prot
Match: Q9TU66 (Small nuclear ribonucleoprotein-associated protein B' OS=Monodelphis domestica OX=13616 GN=SNRPB PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.6e-43
Identity = 135/258 (52.33%), Postives = 160/258 (62.02%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           M++ KSSKMLQ+I+ RMR  +QDGR  +G F AFD+HMNL+L DC+EFRK+ P   K+  
Sbjct: 1   MTVGKSSKMLQHIDCRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA- 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPT-A 120
            ER+E+R LGLVLLRGE ++SMTVEGPPP +   A+   A A  GPGIGRAAGRG+P   
Sbjct: 61  -EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGVPAGV 120

Query: 121 PLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPG 180
           P+ QA  GLAGP+RGVGGP+  +M PQ  R  V   +A       A +   P Q P   G
Sbjct: 121 PMPQAPAGLAGPIRGVGGPSQQVMTPQ-GRGTVAAAAAA----ATASIAGAPTQYPSGRG 180

Query: 181 QAPPPIGRGMPPP---VPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPP 240
             PPP+GRG PPP    PPP     RP   PP    G P     PMG PP G  MR    
Sbjct: 181 GPPPPMGRGAPPPGMMAPPP---GMRPPMGPPM---GMPPGRGAPMGMPPPG--MR---- 238

Query: 241 PPRPGMPAPPPRPGMPPP 255
           PP PGM  PPP PGM PP
Sbjct: 241 PPPPGMRGPPP-PGMRPP 238

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AZK2 (Small nuclear ribonucleoprotein-associated protein OS=Cucumis melo OX=3656 GN=LOC103484284 PE=3 SV=1)

HSP 1 Score: 524 bits (1349), Expect = 4.62e-187
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KPA9 (Small nuclear ribonucleoprotein-associated protein OS=Cucumis sativus OX=3659 GN=Csa_6G526300 PE=3 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 2.67e-186
Identity = 282/284 (99.30%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAP+IRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPIIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPPIGRGMPPPVPPPQFS ARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPIGRGMPPPVPPPQFSGARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UAP6 (Small nuclear ribonucleoprotein-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009950 PE=3 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 7.11e-186
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 3   MSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEE 62
           MSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEE
Sbjct: 1   MSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEE 60

Query: 63  RDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLV 122
           RDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLV
Sbjct: 61  RDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLV 120

Query: 123 QAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAP 182
           QAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAP
Sbjct: 121 QAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQAP 180

Query: 183 PPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGM 242
           PPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGM
Sbjct: 181 PPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGM 240

Query: 243 PAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           PAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ
Sbjct: 241 PAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 282

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EJ14 (Small nuclear ribonucleoprotein-associated protein OS=Cucurbita moschata OX=3662 GN=LOC111433057 PE=3 SV=1)

HSP 1 Score: 514 bits (1323), Expect = 4.24e-183
Identity = 279/284 (98.24%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPP+GRGMPPP PPPQFSAARPGGAPPQPFP PPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPVGRGMPPPGPPPQFSAARPGGAPPQPFPVPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVP+YGPPRPGMPPPP PQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPIYGPPRPGMPPPPAPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IQN3 (Small nuclear ribonucleoprotein-associated protein OS=Cucurbita maxima OX=3661 GN=LOC111477902 PE=3 SV=1)

HSP 1 Score: 508 bits (1307), Expect = 1.16e-180
Identity = 275/284 (96.83%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           +ERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
Sbjct: 61  DERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPGQ 180
           LVQAQPGLAGPVRGVGGPAPGMMQPQISRPP+PQLSAPPM+YPAAPVIRPPGQMPMFPGQ
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPIPQLSAPPMSYPAAPVIRPPGQMPMFPGQ 180

Query: 181 APPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRP 240
           APPP+GRGMPPP PPPQFSAARPGGAPPQPF  PPQFAQRPMGPPPTGQVMRGPPPPPRP
Sbjct: 181 APPPVGRGMPPPGPPPQFSAARPGGAPPQPFQVPPQFAQRPMGPPPTGQVMRGPPPPPRP 240

Query: 241 GMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQNQQQ 284
           GMPAPPPRPGMPPPPGGAVP+YGPPRPGMPPPP PQNQQQNQQQ
Sbjct: 241 GMPAPPPRPGMPPPPGGAVPIYGPPRPGMPPPPAPQNQQQNQQQ 284

[Close]

BLAST of MELO3C007041.jh1 vs. TAIR 10
Match: AT4G20440.1 (small nuclear ribonucleoprotein associated protein B )

HSP 1 Score: 338.2 bits (866), Expect = 6.4e-93
Identity = 215/285 (75.44%), Postives = 227/285 (79.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EER++RRTLGLVLLRGEEVISMTVEGPPP EESRAKA +AAA+AGPGIGRAAGRG+PT P
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQM---PMF 180
           LVQAQPGL+GPVRGVGGPAPGMMQPQISRP  PQLSAP       P+IRPPGQM   P F
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRP--PQLSAP-------PIIRPPGQMLPPPPF 180

Query: 181 PGQAPPPIGRGMPPPVPPPQFSAARPGGAPPQPF--PGPPQFAQRPMGPPPTGQVMRGPP 240
            GQ  PP+GRG PPP         RP   PPQ F  P PPQ+ QRPM PPP G +MRGPP
Sbjct: 181 GGQG-PPMGRGPPPPY------GMRP---PPQQFSGPPPPQYGQRPMIPPP-GGMMRGPP 240

Query: 241 PPPRPGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQ 281
           PPP      PPPRPGMPP PGG    + PPRPGMP    P NQQQ
Sbjct: 241 PPPHGMQGPPPPRPGMPPAPGG----FAPPRPGMP----PHNQQQ 257

[Close]

BLAST of MELO3C007041.jh1 vs. TAIR 10
Match: AT4G20440.2 (small nuclear ribonucleoprotein associated protein B )

HSP 1 Score: 338.2 bits (866), Expect = 6.4e-93
Identity = 215/285 (75.44%), Postives = 227/285 (79.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EER++RRTLGLVLLRGEEVISMTVEGPPP EESRAKA +AAA+AGPGIGRAAGRG+PT P
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQM---PMF 180
           LVQAQPGL+GPVRGVGGPAPGMMQPQISRP  PQLSAP       P+IRPPGQM   P F
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRP--PQLSAP-------PIIRPPGQMLPPPPF 180

Query: 181 PGQAPPPIGRGMPPPVPPPQFSAARPGGAPPQPF--PGPPQFAQRPMGPPPTGQVMRGPP 240
            GQ  PP+GRG PPP         RP   PPQ F  P PPQ+ QRPM PPP G +MRGPP
Sbjct: 181 GGQG-PPMGRGPPPPY------GMRP---PPQQFSGPPPPQYGQRPMIPPP-GGMMRGPP 240

Query: 241 PPPRPGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQ 281
           PPP      PPPRPGMPP PGG    + PPRPGMP    P NQQQ
Sbjct: 241 PPPHGMQGPPPPRPGMPPAPGG----FAPPRPGMP----PHNQQQ 257

[Close]

BLAST of MELO3C007041.jh1 vs. TAIR 10
Match: AT4G20440.3 (small nuclear ribonucleoprotein associated protein B )

HSP 1 Score: 338.2 bits (866), Expect = 6.4e-93
Identity = 215/285 (75.44%), Postives = 227/285 (79.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EER++RRTLGLVLLRGEEVISMTVEGPPP EESRAKA +AAA+AGPGIGRAAGRG+PT P
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQM---PMF 180
           LVQAQPGL+GPVRGVGGPAPGMMQPQISRP  PQLSAP       P+IRPPGQM   P F
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRP--PQLSAP-------PIIRPPGQMLPPPPF 180

Query: 181 PGQAPPPIGRGMPPPVPPPQFSAARPGGAPPQPF--PGPPQFAQRPMGPPPTGQVMRGPP 240
            GQ  PP+GRG PPP         RP   PPQ F  P PPQ+ QRPM PPP G +MRGPP
Sbjct: 181 GGQG-PPMGRGPPPPY------GMRP---PPQQFSGPPPPQYGQRPMIPPP-GGMMRGPP 240

Query: 241 PPPRPGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQ 281
           PPP      PPPRPGMPP PGG    + PPRPGMP    P NQQQ
Sbjct: 241 PPPHGMQGPPPPRPGMPPAPGG----FAPPRPGMP----PHNQQQ 257

[Close]

BLAST of MELO3C007041.jh1 vs. TAIR 10
Match: AT4G20440.4 (small nuclear ribonucleoprotein associated protein B )

HSP 1 Score: 338.2 bits (866), Expect = 6.4e-93
Identity = 215/285 (75.44%), Postives = 227/285 (79.65%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
           MSMSKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 61  EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
           EER++RRTLGLVLLRGEEVISMTVEGPPP EESRAKA +AAA+AGPGIGRAAGRG+PT P
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQM---PMF 180
           LVQAQPGL+GPVRGVGGPAPGMMQPQISRP  PQLSAP       P+IRPPGQM   P F
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRP--PQLSAP-------PIIRPPGQMLPPPPF 180

Query: 181 PGQAPPPIGRGMPPPVPPPQFSAARPGGAPPQPF--PGPPQFAQRPMGPPPTGQVMRGPP 240
            GQ  PP+GRG PPP         RP   PPQ F  P PPQ+ QRPM PPP G +MRGPP
Sbjct: 181 GGQG-PPMGRGPPPPY------GMRP---PPQQFSGPPPPQYGQRPMIPPP-GGMMRGPP 240

Query: 241 PPPRPGMPAPPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQQQ 281
           PPP      PPPRPGMPP PGG    + PPRPGMP    P NQQQ
Sbjct: 241 PPPHGMQGPPPPRPGMPPAPGG----FAPPRPGMP----PHNQQQ 257

[Close]

BLAST of MELO3C007041.jh1 vs. TAIR 10
Match: AT5G44500.1 (Small nuclear ribonucleoprotein family protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.2e-85
Identity = 201/284 (70.77%), Postives = 216/284 (76.06%), Query Frame = 0


Query: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKT 60
           MSMSKSSKMLQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKG KKT
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60

Query: 61  NEERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTA 120
           NEER+ERRTLGLVLLRGEEVISMTVEGPPP EESRAK+ +  A+AGPGIGRAAGRG+PT 
Sbjct: 61  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 121 PLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPMFPG 180
           PLVQAQPGL+GPVRG+GGPAPGMMQPQISRPP               +IRPPGQMP    
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQISRPP--------------QIIRPPGQMP---- 180

Query: 181 QAPPPIGRGMPPPVPPPQFSAARPGGAPPQPFPGPPQFA--QRPMGPPPTGQVMRGPPPP 240
             PP  G+G PPP           G  PP P P PPQ+   QRPM  PP G +MRGPPPP
Sbjct: 181 PQPPFAGQGGPPP---------PYGMRPPYPGPPPPQYGGQQRPMMIPPPGGMMRGPPPP 240

Query: 241 PRPGMPAPPP-RPGMPPPPGGAVPVYGPPRPGMPP-PPNPQNQQ 280
              GM  PPP RPGMPPP  G  P++ PP PGMPP PPN  NQQ
Sbjct: 241 --HGMQGPPPSRPGMPPP--GGAPMFAPPHPGMPPAPPNHHNQQ 253

The following BLAST results are available for this feature:

BLAST of MELO3C007041.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439504.1	9.54e-187	100.00	PREDICTED: small nuclear ribonucleoprotein-associated proteins B and B' [Cucumis...	[more]
XP_004134546.1	5.51e-186	99.30	small nuclear ribonucleoprotein-associated protein B' [Cucumis sativus] >KGN4949...	[more]
KAA0052454.1	1.47e-185	100.00	small nuclear ribonucleoprotein-associated proteins B and B' [Cucumis melo var. ...	[more]
XP_038882444.1	3.19e-185	99.30	small nuclear ribonucleoprotein-associated protein B'-like [Benincasa hispida] >...	[more]
XP_022925730.1	8.75e-183	98.24	small nuclear ribonucleoprotein-associated protein B'-like [Cucurbita moschata] ...	[more]

BLAST of MELO3C007041.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9N1Q0	6.4e-45	52.33	Small nuclear ribonucleoprotein-associated protein B' OS=Macropus eugenii OX=931...	[more]
P14678	1.6e-43	49.45	Small nuclear ribonucleoprotein-associated proteins B and B' OS=Homo sapiens OX=...	[more]
Q17QN3	2.7e-43	49.08	Small nuclear ribonucleoprotein-associated protein N OS=Bos taurus OX=9913 GN=SN...	[more]
Q9TU67	3.5e-43	49.08	Small nuclear ribonucleoprotein-associated protein B' OS=Erinaceus europaeus OX=...	[more]
Q9TU66	4.6e-43	52.33	Small nuclear ribonucleoprotein-associated protein B' OS=Monodelphis domestica O...	[more]

BLAST of MELO3C007041.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZK2	4.62e-187	100.00	Small nuclear ribonucleoprotein-associated protein OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KPA9	2.67e-186	99.30	Small nuclear ribonucleoprotein-associated protein OS=Cucumis sativus OX=3659 GN...	[more]
A0A5A7UAP6	7.11e-186	100.00	Small nuclear ribonucleoprotein-associated protein OS=Cucumis melo var. makuwa O...	[more]
A0A6J1EJ14	4.24e-183	98.24	Small nuclear ribonucleoprotein-associated protein OS=Cucurbita moschata OX=3662...	[more]
A0A6J1IQN3	1.16e-180	96.83	Small nuclear ribonucleoprotein-associated protein OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of MELO3C007041.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20440.1	6.4e-93	75.44	small nuclear ribonucleoprotein associated protein B	[more]
AT4G20440.2	6.4e-93	75.44	small nuclear ribonucleoprotein associated protein B	[more]
AT4G20440.3	6.4e-93	75.44	small nuclear ribonucleoprotein associated protein B	[more]
AT4G20440.4	6.4e-93	75.44	small nuclear ribonucleoprotein associated protein B	[more]
AT5G44500.1	2.2e-85	70.77	Small nuclear ribonucleoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001163	LSM domain, eukaryotic/archaea-type	SMART	SM00651	Sm3	coord: 7..84 e-value: 4.5E-22 score: 89.3
IPR001163	LSM domain, eukaryotic/archaea-type	PFAM	PF01423	LSM	coord: 9..83 e-value: 7.8E-19 score: 67.1
None	No IPR available	GENE3D	2.30.30.100		coord: 1..93 e-value: 6.2E-33 score: 114.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..284
None	No IPR available	PANTHER	PTHR10701	SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N	coord: 1..259
None	No IPR available	PANTHER	PTHR10701:SF14	SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN	coord: 1..259
None	No IPR available	CDD	cd01717	Sm_B	coord: 5..85 e-value: 1.55429E-53 score: 166.958
IPR017131	Small ribonucleoprotein associated, SmB/SmN	PIRSF	PIRSF037187	SmB_SmN	coord: 1..249 e-value: 1.5E-81 score: 271.4 coord: 237..275 e-value: 4000.0 score: -13.6
IPR010920	LSM domain superfamily	SUPERFAMILY	50182	Sm-like ribonucleoproteins	coord: 7..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007041.jh1.t1	MELO3C007041.jh1.t1	mRNA