MELO3C006659 (gene) Melon (DHL92) v4

Overview


Name	MELO3C006659
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CAP-Gly domain-containing linker protein 1
Location	chr06: 4806056 .. 4808623 (+)
RNA-Seq Expression	MELO3C006659
Synteny	MELO3C006659

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGTTTCACCCCACGAGGAAGAGAGTGAGCAAAGTGGTGAGTGAAGCGTGGCGTTGGGTTTTGTTTTGGTTCAAAATTCAAATCTTCGACAAACTCTGTCCCCATCTTCTCTTATTTTTCTTCCTTTTTTTTCTTTTTTTCCTTTCTCTTTCCTCAAATCTTTTGAATTTTAATTTCGATTTCACCCATTCCCATCTCAACCCTAATTCCTAATTCTTCAGATTCTGATTTTCCCCATTTTCATTTTTCGATCCCTGCTTCTATGGCGGACTCCGACTCTTCCACTCCTTCCCCTGCTCCTCTATCAGCAGTGAGTTCTCTTCATTTTCTTCCTTTTCACTTTTTAATGATCCCCTATTTCTTTTTTCCACATACCCATCTTCTTCTTCTTTCAATTACTTACTCTCCCCTTGCTTTTTCTATCTAACATTCCTATTTCTTCTGCTCACAGAAAAAGGAGAATCTAACCCCCATTGGCTCCAAAATTACGGTATTTTTTTTTTTTCCTTTTTTTGGACTCTATTAATGTTAGTTGTGAATTTTGCCTTGTGATGTTGAGATTATGAACTTTAATTGTAGGACTTTTGAGAACTAAATTGTCAGTGTTTGAAGTTGGGATTTTGAGAATATGAATTATATGTGTTTGGGACTTTTCAGATAGTGCAGCTAAAGAGTGTTATGAATGTAAATAAGAGATTTTTGGGTTGGTCCTGCTGATGTAGTATTAATAATTAACATGGTTTCCTAAAATGTAGGAAATCCTGAGTTCAAACTTCTTCAGTGTCGTTTCCTCTTCGTTTCTTGTAATTGGTTACTTGTAGGCTTATCTACTAATTTTCAAACTAGAGATGGAGAGGAAGGAGTGTTAAGAACATATATACAAAGTATATACATGTATAAAAAGTCTTTTGGGTATGTGGTGTGATTTCAAAGTCTTCTGAGATAACTGCAATTCAACTTTGATCTTCTGAGATTTGATGTGTTTGTTCTCAGGAATTGAACGAATCAAGATCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGTGAAGTTTAGATTTACAGTGAGCCTGATTAAGCCCTTGCTCATTTTTAGTTGTTTCTGTTCTCTGATTTTGTAAACGTTCCCTGTGTTTGAGCATTGTTTCAGGATCTCCAGAACTGGAGGTCAAAACTAGACACGCAAGTTAATACCTACCGCAGTGTAAGTTAATTGTAGTGAAATTTGTATTGGTTTTTATTCTATTTGTTAATTCTTTTTTATGTTTTCACATATTTCTTAAATGTAACTCCACGGTTCACCAGCCAACATGCCATGTTCTAAGATATTTGTGTTTGAGTTTCCTACAATGAGTCAACATGATCCATAACTAAGTTGGTTATCCTAGAAGCCTAGTGTGATCAGATATTGTGGCTCATACAGACAGTCGGTTACTGTAGGCTAGACATGATGTTGGTTAACTGATTCTTGGTAGTTCAAACTTCAAAGTGATCTCAACTCAAGTCTGCTAATGTTTTCACTGTGTAGGATATTTAATCCCTCAATATCTTGGTCTACAAGAAAATTTATACATCATAATGTAATTTTCCCATTTGTTGGTCATATCCATCGGTATCCCACCTATTTCAATTTTGTCTGTATCTTCCTGCACCATTTGATACATATCTTCAATGCTTCATACAGGAACTCTCCGAACTCAAGAAATCGCTTAATGTTGAAGTAGAGCACCTTCGCACGGTAAGCGAGCAATGCTTCACAGATTGAATATGCCTTTAAACTTTTTGATGCCATTTGGAAGGGCAATAAATTTGTAACATGAAACCAGGAATTCCAAGAACTAAGGACAACCCTCCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTGTAAGTTCTATTTCTAACAAGACTGAATTTCAGAGTCAAATATACAAATGAATTTCATCAAAACACCACCAACCCACCCTATCTCAACATATTCTTGACCAATATATTGAAGAAAATTATGAAATGCTAGCAGCTTCAGGATGTTTCTGTGGACACTAATGAGACACAACATCAACATCCAGCGGGAAGCCGCGACAAGGAAGATGCAGACGAGGCTAAGAAGGATGGCTTAACAGAGGAGAAAGGTAATGAAGCTGAGAATTAAGTGGCAGTTTTAGCATCGTACGTTCTAAGCGTTTCATTGCATGGTAAGAGAATCTTTGCAGTTCTCTCTAGGCGATGGATTTCCACATTTTTCTATTTTGTCATGCTCTATTTAAATTTCGATCTTTGTAACGATAGGGTTCTTTTCAATATTTCCCATTGAGGTGTTCTATGATATCTCCACCCTTTAGAGCTGATGATCCGTCTCTCTGGCTATGTCTCTTTCTCTATTTAACTATGGAGTTTATGTTGGAAATTTTTCAGTACTTCATAGCATTGATTCGTTGAAGAATGACGTGTTGCTTGGTTCTATATTTCTCTGGCTTATAACGAATTGTGGGGAAGTAGGTAATTCTTGTAAAGGCTCACTTTTGACAACTAATTGGTTCATGATTTTGGTTTTT

mRNA sequence

ACAGTTTCACCCCACGAGGAAGAGAGTGAGCAAAGTGGTGAGTGAAGCGTGGCGTTGGGTTTTGTTTTGGTTCAAAATTCAAATCTTCGACAAACTCTGTCCCCATCTTCTCTTATTTTTCTTCCTTTTTTTTCTTTTTTTCCTTTCTCTTTCCTCAAATCTTTTGAATTTTAATTTCGATTTCACCCATTCCCATCTCAACCCTAATTCCTAATTCTTCAGATTCTGATTTTCCCCATTTTCATTTTTCGATCCCTGCTTCTATGGCGGACTCCGACTCTTCCACTCCTTCCCCTGCTCCTCTATCAGCAAAAAAGGAGAATCTAACCCCCATTGGCTCCAAAATTACGGAATTGAACGAATCAAGATCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAACTGGAGGTCAAAACTAGACACGCAAGTTAATACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCGCTTAATGTTGAAGTAGAGCACCTTCGCACGGAATTCCAAGAACTAAGGACAACCCTCCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCTGTGGACACTAATGAGACACAACATCAACATCCAGCGGGAAGCCGCGACAAGGAAGATGCAGACGAGGCTAAGAAGGATGGCTTAACAGAGGAGAAAGGTAATGAAGCTGAGAATTAAGTGGCAGTTTTAGCATCGTACGTTCTAAGCGTTTCATTGCATGGTAAGAGAATCTTTGCAGTTCTCTCTAGGCGATGGATTTCCACATTTTTCTATTTTGTCATGCTCTATTTAAATTTCGATCTTTGTAACGATAGGGTTCTTTTCAATATTTCCCATTGAGGTGTTCTATGATATCTCCACCCTTTAGAGCTGATGATCCGTCTCTCTGGCTATGTCTCTTTCTCTATTTAACTATGGAGTTTATGTTGGAAATTTTTCAGTACTTCATAGCATTGATTCGTTGAAGAATGACGTGTTGCTTGGTTCTATATTTCTCTGGCTTATAACGAATTGTGGGGAAGTAGGTAATTCTTGTAAAGGCTCACTTTTGACAACTAATTGGTTCATGATTTTGGTTTTT

Coding sequence (CDS)

ATGGCGGACTCCGACTCTTCCACTCCTTCCCCTGCTCCTCTATCAGCAAAAAAGGAGAATCTAACCCCCATTGGCTCCAAAATTACGGAATTGAACGAATCAAGATCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAACTGGAGGTCAAAACTAGACACGCAAGTTAATACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCGCTTAATGTTGAAGTAGAGCACCTTCGCACGGAATTCCAAGAACTAAGGACAACCCTCCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCTGTGGACACTAATGAGACACAACATCAACATCCAGCGGGAAGCCGCGACAAGGAAGATGCAGACGAGGCTAAGAAGGATGGCTTAACAGAGGAGAAAGGTAATGAAGCTGAGAATTAA

Protein sequence

MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQHQHPAGSRDKEDADEAKKDGLTEEKGNEAEN

Homology

[Close]

BLAST of MELO3C006659 vs. NCBI nr
Match: XP_008438879.1 (PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo] >KAA0049490.1 CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo var. makuwa] >TYK16169.1 CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 5.0e-70
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120

Query: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           QHPAGSRDKEDADEAKKDGLTEEKGNEAEN
Sbjct: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 150

[Close]

BLAST of MELO3C006659 vs. NCBI nr
Match: XP_008438878.1 (PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG-LQDVSVDTNETQ 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG LQDVSVDTNETQ
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGQLQDVSVDTNETQ 120

Query: 121 HQHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           HQHPAGSRDKEDADEAKKDGLTEEKGNEAEN
Sbjct: 121 HQHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151

[Close]

BLAST of MELO3C006659 vs. NCBI nr
Match: XP_004134206.1 (CAP-Gly domain-containing linker protein 1 [Cucumis sativus] >KAE8650394.1 hypothetical protein Csa_010955 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 6.7e-67
Identity = 145/150 (96.67%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120
           +TYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NETQH
Sbjct: 61  HTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNETQH 120

Query: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           QHP GS DKEDADEAKKD LTEEKGNEAEN
Sbjct: 121 QHPVGSPDKEDADEAKKDNLTEEKGNEAEN 150

[Close]

BLAST of MELO3C006659 vs. NCBI nr
Match: XP_038878824.1 (CAP-Gly domain-containing linker protein 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 141/150 (94.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MAD+DSSTPS APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADADSSTPSSAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSV++NE QH
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVESNEIQH 120

Query: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           QHP  S DKEDAD+AKKDGLTEEKGNEAEN
Sbjct: 121 QHPVESSDKEDADKAKKDGLTEEKGNEAEN 150

[Close]

BLAST of MELO3C006659 vs. NCBI nr
Match: XP_038878834.1 (CAP-Gly domain-containing linker protein 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 5.0e-62
Identity = 139/150 (92.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MAD+DSSTPS APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADADSSTPSSAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG  DVSV++NE QH
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG--DVSVESNEIQH 120

Query: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           QHP  S DKEDAD+AKKDGLTEEKGNEAEN
Sbjct: 121 QHPVESSDKEDADKAKKDGLTEEKGNEAEN 148

[Close]

BLAST of MELO3C006659 vs. ExPASy TrEMBL
Match: A0A5D3D134 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00970 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120

Query: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           QHPAGSRDKEDADEAKKDGLTEEKGNEAEN
Sbjct: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 150

[Close]

BLAST of MELO3C006659 vs. ExPASy TrEMBL
Match: A0A1S3AY29 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483838 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNETQH 120

Query: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           QHPAGSRDKEDADEAKKDGLTEEKGNEAEN
Sbjct: 121 QHPAGSRDKEDADEAKKDGLTEEKGNEAEN 150

[Close]

BLAST of MELO3C006659 vs. ExPASy TrEMBL
Match: A0A1S3AXE8 (CAP-Gly domain-containing linker protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483838 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.9e-69
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60
           MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV
Sbjct: 1   MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV 60

Query: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG-LQDVSVDTNETQ 120
           NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG LQDVSVDTNETQ
Sbjct: 61  NTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGQLQDVSVDTNETQ 120

Query: 121 HQHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151
           HQHPAGSRDKEDADEAKKDGLTEEKGNEAEN
Sbjct: 121 HQHPAGSRDKEDADEAKKDGLTEEKGNEAEN 151

[Close]

BLAST of MELO3C006659 vs. ExPASy TrEMBL
Match: A0A6J1IY17 (CAP-Gly domain-containing linker protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479493 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.0e-58
Identity = 134/155 (86.45%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLD 60
           MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLD
Sbjct: 1   MADADSSSPSVPAPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLD 60

Query: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNE 120
           TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120

Query: 121 TQHQHPAGSRDKEDADEAKKDGL--TEEKGNEAEN 151
           T+HQHPA   +KEDA EA K+G   TEEKGNEA N
Sbjct: 121 TRHQHPAEISEKEDAGEATKEGCGSTEEKGNEAGN 155

[Close]

BLAST of MELO3C006659 vs. ExPASy TrEMBL
Match: A0A6J1GVY7 (CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457976 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57
Identity = 134/155 (86.45%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLD 60
           MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLD
Sbjct: 1   MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLD 60

Query: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNE 120
           TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120

Query: 121 TQHQHPAGSRDKEDADEAKKD--GLTEEKGNEAEN 151
           T+HQHPA   +KEDA EA K+  G TEEKGNEA N
Sbjct: 121 TRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN 155

[Close]

BLAST of MELO3C006659 vs. TAIR 10
Match: AT4G15790.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 4.1e-30
Identity = 81/158 (51.27%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MADSDSSTPSP-------APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWR 60
           MAD  S + SP       +P + KK+N  P+ SK+TELNESR+ELLNRIQ+LKQDLQ+WR
Sbjct: 1   MADQTSDSTSPVAPLSVSSPTATKKDNTNPVDSKLTELNESRAELLNRIQNLKQDLQSWR 60

Query: 61  SKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSV 120
            KLDTQV  YR ELS LKK+LN+EVE LR EF++L+TTL QQQ+DV+ SL++LGLQD   
Sbjct: 61  GKLDTQVKVYREELSGLKKTLNLEVEQLREEFKDLKTTLNQQQDDVSASLKSLGLQDSKE 120

Query: 121 DTNETQHQHPAGSRDKEDADEAKKDGL-TEEKGNEAEN 151
             ++           + +  E K + L T++   EAE+
Sbjct: 121 QIDK-----------RSEVTEEKVEALSTDDNAKEAEH 147

The following BLAST results are available for this feature:

BLAST of MELO3C006659 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438879.1	5.0e-70	100.00	PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo] ...	[more]
XP_008438878.1	1.2e-68	99.34	PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 [Cucumis melo]	[more]
XP_004134206.1	6.7e-67	96.67	CAP-Gly domain-containing linker protein 1 [Cucumis sativus] >KAE8650394.1 hypot...	[more]
XP_038878824.1	1.4e-64	94.00	CAP-Gly domain-containing linker protein 1 isoform X1 [Benincasa hispida]	[more]
XP_038878834.1	5.0e-62	92.67	CAP-Gly domain-containing linker protein 1 isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C006659 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C006659 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D134	2.4e-70	100.00	CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3AY29	2.4e-70	100.00	CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3AXE8	5.9e-69	99.34	CAP-Gly domain-containing linker protein 1 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IY17	8.0e-58	86.45	CAP-Gly domain-containing linker protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GVY7	1.0e-57	86.45	CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C006659 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15790.1	4.1e-30	51.27	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 28..98
None	No IPR available	GENE3D	1.20.1170.10		coord: 8..113 e-value: 6.0E-7 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR34681	UVEAL AUTOANTIGEN WITH COILED-COIL/ANKYRIN	coord: 1..139
None	No IPR available	PANTHER	PTHR34681:SF2	UVEAL AUTOANTIGEN WITH COILED-COIL/ANKYRIN	coord: 1..139
None	No IPR available	SUPERFAMILY	58113	Apolipoprotein A-I	coord: 30..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006659.1	MELO3C006659.1	mRNA