MELO3C006513 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGTAGGTCTGCCATTTTCTTTTGAGTAAATCAAACAAAGAATGTGAATGAGATGGATAATTGGAGATGAAAGACTTTGTGATCGGCGGTTCTGCCTTTCGGGAATTATTGAACCGGCCATTTGAACCAATCGTAAACTCTCTCTGATCTCCCCTCGCGCAAAATCAAAACGCCGCAAGACTCAAAACTTTGTGTCTCAAAATTCGAACTTGTTGAATTACTGAGCTCCACTGGTTATTCGTCCTGAAACCCACATCGACGAACAGCTTCGGCTTTACGATTCAACCCTAGAAGGTACTACCCATCGCTCTCTCTTCCCATCGATCCATTGCGCTCTTTGTTTATGTAGAAAATCCACTCAGTTTACAATGTTCACTGTTTCTTCTTGTCAAATAATCAAAACCCATCTTCTTCCTTTCTTCTTATCGTCCTTCGTTGGTGAGTTTGCATGATTTTTCTTACAGGATCCGATGGGTTGCTGCCTGCATTTGTATGAAAACTTTTTGTTTATTTGGTTGTTTGAGATGTTGATTGTAATTGTCTATCGTCGTGTGGATGGAGTTGCTACCTAGAATGTTTCTTGGAGGAATGAACATCCATCGTATATATTTATTTATTAGTTTCTAAATTAGGGTTAGCCTTCACCTGACTGCCAGCCGCTTCCCATTTCTCTTCTCAATCTCTCGATCTTTCGCCTCCCCCCACGTCCTATGTCCGTTGGCCATACAGCTTCGTCTCCCTTTCTCTGTGTCTCAGCTTCCTCTCTATCGGCCTCACTTCGTCTTCATCTCACGATTCTGAAGTACATTTTGTTTCATGGCAACTAAAAACTGTTGGTGCTCTTATTCCTTCTCAATAGTAATCTTTTAGAGAATCCAACCATAGCTCAATTGGTACACGACATACACTATTGACCTAGAGGTTAGAGGTTGGAATCCTCCTTCCCAAATGCAACCTTACTTGAACAGGATCTGCTCTATTTATTTTGTTTGGTATCTCATAATACTAACTCTTTGAATGATCAATGGACTTTTAAACGTGTTGGTATTTTATAAGCTGTTCTGTATTGATCGGTATGGTTGCTAACAAACCCATGATCTCTTCTTGTCCAGAATCACATAATTTACAAAATGAAGAGGCCAATGCCCTGGAATGAACAAGTAGATGTTATATCATCAGGTGAATCTTCTTCCTCTGATTCAGAAGCAGCAGTACAAAATGATGGATATGAGTTCAAGCCTTCCCTAGACGATTTCAAAATCCCTGCCAAAGAAATGACATCTGAAGGTATTTTGGCCTTGCATGAGTGAGATCAAGTTCAATTCGAAGTCTCTGATAATCAAATGCTGCTGTGTATATAATTTTCAAACTCTTAAGCTTTGAAAAGAGGATCTTCTTTGAAATGTCTTCTAACGATGCAGGTATGTTGATGAAAAGGGCGGAAATGTATCAAGAATACATGAAACAGATCCAAATCCCAGCACAACGTGGTTCTGTGATACCATTTACAACTTGGATGGGTTTAGGCAAATCTATAAAGCAACTTTATGGCCAACCTTTGCATTACTTGACTAACATTCTACTCAAACAATGGGATCAATTACGGTTAGGAAGTGCGGATGAATATAAGCCATTGGATACTGTAATTCATCCGAGTAAAGCTGAAGCAACTGTATGGCTGGTTGAAGAGATTCATAGGCGCACCTCATCACATCATCATGTTGCTAAACTCTGGTTATCAGACCCGATGCACGAAGCGTACGTTGACTCCATTTTCCCCCAACTATGAAGGCTGCTTTCAGTTTTGTTCTGCTCTGTGTTGATATTATAACATTTTCTAGAAGGCTAACATGTCAGTGACAATGTGAATTGTAATAGAAACAGCATAGTTCTTTCGTCACACTGCACTTCACTATGAAGAAGCTCGAGCATTGCTTCTTCTGTCCATTGTTGCCATCTGTCTGTTCACTAGTTGACTGCATTTACTTTTGTAGCAAAGAACGAATGTAAATCAATATTGGAGATGCATATTTATCTTACACTT TATGTAGGTCTGCCATTTTCTTTTGAGTAAATCAAACAAAGAATGTGAATGAGATGGATAATTGGAGATGAAAGACTTTGTGATCGGCGGTTCTGCCTTTCGGGAATTATTGAACCGGCCATTTGAACCAATCGTAAACTCTCTCTGATCTCCCCTCGCGCAAAATCAAAACGCCGCAAGACTCAAAACTTTGTGTCTCAAAATTCGAACTTGTTGAATTACTGAGCTCCACTGGTTATTCGTCCTGAAACCCACATCGACGAACAGCTTCGGCTTTACGATTCAACCCTAGAAGAATCACATAATTTACAAAATGAAGAGGCCAATGCCCTGGAATGAACAAGTAGATGTTATATCATCAGGTGAATCTTCTTCCTCTGATTCAGAAGCAGCAGTACAAAATGATGGATATGAGTTCAAGCCTTCCCTAGACGATTTCAAAATCCCTGCCAAAGAAATGACATCTGAAGGTATGTTGATGAAAAGGGCGGAAATGTATCAAGAATACATGAAACAGATCCAAATCCCAGCACAACGTGGTTCTGTGATACCATTTACAACTTGGATGGGTTTAGGCAAATCTATAAAGCAACTTTATGGCCAACCTTTGCATTACTTGACTAACATTCTACTCAAACAATGGGATCAATTACGGTTAGGAAGTGCGGATGAATATAAGCCATTGGATACTGTAATTCATCCGAGTAAAGCTGAAGCAACTGTATGGCTGGTTGAAGAGATTCATAGGCGCACCTCATCACATCATCATGTTGCTAAACTCTGGTTATCAGACCCGATGCACGAAGCGTACGTTGACTCCATTTTCCCCCAACTATGAAGGCTGCTTTCAGTTTTGTTCTGCTCTGTGTTGATATTATAACATTTTCTAGAAGGCTAACATGTCAGTGACAATGTGAATTGTAATAGAAACAGCATAGTTCTTTCGTCACACTGCACTTCACTATGAAGAAGCTCGAGCATTGCTTCTTCTGTCCATTGTTGCCATCTGTCTGTTCACTAGTTGACTGCATTTACTTTTGTAGCAAAGAACGAATGTAAATCAATATTGGAGATGCATATTTATCTTACACTT ATGAAGAGGCCAATGCCCTGGAATGAACAAGTAGATGTTATATCATCAGGTGAATCTTCTTCCTCTGATTCAGAAGCAGCAGTACAAAATGATGGATATGAGTTCAAGCCTTCCCTAGACGATTTCAAAATCCCTGCCAAAGAAATGACATCTGAAGGTATGTTGATGAAAAGGGCGGAAATGTATCAAGAATACATGAAACAGATCCAAATCCCAGCACAACGTGGTTCTGTGATACCATTTACAACTTGGATGGGTTTAGGCAAATCTATAAAGCAACTTTATGGCCAACCTTTGCATTACTTGACTAACATTCTACTCAAACAATGGGATCAATTACGGTTAGGAAGTGCGGATGAATATAAGCCATTGGATACTGTAATTCATCCGAGTAAAGCTGAAGCAACTGTATGGCTGGTTGAAGAGATTCATAGGCGCACCTCATCACATCATCATGTTGCTAAACTCTGGTTATCAGACCCGATGCACGAAGCGTACGTTGACTCCATTTTCCCCCAACTATGA MKRPMPWNEQVDVISSGESSSSDSEAAVQNDGYEFKPSLDDFKIPAKEMTSEGMLMKRAEMYQEYMKQIQIPAQRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNILLKQWDQLRLGSADEYKPLDTVIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMHEAYVDSIFPQL Homology
BLAST of MELO3C006513 vs. NCBI nr
Match: XP_008438640.1 (PREDICTED: protein RDM1 [Cucumis melo] >XP_008438641.1 PREDICTED: protein RDM1 [Cucumis melo] >XP_008438642.1 PREDICTED: protein RDM1 [Cucumis melo] >XP_008438643.1 PREDICTED: protein RDM1 [Cucumis melo]) HSP 1 Score: 358.2 bits (918), Expect = 4.0e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C006513 vs. NCBI nr
Match: KAA0049342.1 (protein RDM1 [Cucumis melo var. makuwa] >TYK17215.1 protein RDM1 [Cucumis melo var. makuwa]) HSP 1 Score: 357.5 bits (916), Expect = 6.7e-95 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C006513 vs. NCBI nr
Match: XP_004134127.1 (protein RDM1 [Cucumis sativus] >XP_004134128.1 protein RDM1 [Cucumis sativus] >XP_031739108.1 protein RDM1 [Cucumis sativus] >KGN56957.1 hypothetical protein Csa_010629 [Cucumis sativus]) HSP 1 Score: 356.3 bits (913), Expect = 1.5e-94 Identity = 171/174 (98.28%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C006513 vs. NCBI nr
Match: XP_038877941.1 (protein RDM1 [Benincasa hispida]) HSP 1 Score: 349.0 bits (894), Expect = 2.4e-92 Identity = 168/174 (96.55%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of MELO3C006513 vs. NCBI nr
Match: XP_022979547.1 (protein RDM1-like [Cucurbita maxima] >XP_022979548.1 protein RDM1-like [Cucurbita maxima] >XP_022979549.1 protein RDM1-like [Cucurbita maxima]) HSP 1 Score: 347.8 bits (891), Expect = 5.3e-92 Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of MELO3C006513 vs. ExPASy Swiss-Prot
Match: Q9LUJ3 (Protein RDM1 OS=Arabidopsis thaliana OX=3702 GN=RDM1 PE=1 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.9e-47 Identity = 89/158 (56.33%), Postives = 120/158 (75.95%), Query Frame = 0
BLAST of MELO3C006513 vs. ExPASy TrEMBL
Match: A0A1S3AWI8 (protein RDM1 OS=Cucumis melo OX=3656 GN=LOC103483688 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.9e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C006513 vs. ExPASy TrEMBL
Match: A0A5D3D0B3 (Protein RDM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00640 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 3.3e-95 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C006513 vs. ExPASy TrEMBL
Match: A0A0A0L8M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146430 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 7.3e-95 Identity = 171/174 (98.28%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C006513 vs. ExPASy TrEMBL
Match: A0A6J1INZ9 (protein RDM1-like OS=Cucurbita maxima OX=3661 GN=LOC111479225 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92 Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of MELO3C006513 vs. ExPASy TrEMBL
Match: A0A6J1GV10 (protein RDM1 OS=Cucurbita moschata OX=3662 GN=LOC111457683 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 4.4e-92 Identity = 166/174 (95.40%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of MELO3C006513 vs. TAIR 10
Match: AT3G22680.1 (RNA-DIRECTED DNA METHYLATION 1 ) HSP 1 Score: 190.3 bits (482), Expect = 1.3e-48 Identity = 89/158 (56.33%), Postives = 120/158 (75.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|