MELO3C006422.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C006422.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	nucleolar and coiled-body phosphoprotein 1
Location	chr06: 3579819 .. 3583541 (-)
RNA-Seq Expression	MELO3C006422.jh1
Synteny	MELO3C006422.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCGGTCCCGCCTTTTTCTGCAGCCATAGCATCTCTACAATCTTCTCTCTGATTCCCGACTCTTCTTCTGCTCATCATCCACAGTTCACTACATTCTTCAGCTTGTCTGTCTTCAAAGTTCAAACATTTATAGTCATTGGAAGGATGCTTGAAGAAAAAGGATGTTTTAAACCTCGCCAAGTTCTTCTCTCACACCACACTATGAAGCAAAGCAACAACCACACCCAAGCTCCCAATTCTGCCGATGAAGCCCTATCTTTACACCCTCAGCACAGGACTCTTCTTCTTCACGCTGTAGCCTTCTTTTTGGAGCGCAATGGTTTCTCCAAAACCCTCAAAAAGTTTCGTTCCGAAGCCCAGATTCAGGTCCATCCCGACTTTAATCTATTTTTTTCTTCCTAAATAGGACTTCTTCGTTGTAATGGTTAATTTTGTGGTTGCCCACTATTATGCTTTGCAATTCAGTCTATTGCTAGATGAATCGCTTAGTTAATTGGGGCTGCTTCCTATTCATGGAGCTTCTCATTCCAAATGTTTGTGGTTTGTTCCGGCTTTACTTGCCAAACGACATTCTTGTTTAATCCTACCTTCGTATTTTTATAGAGCAAGTTTACTAGTTAGTAGTTATTTATGATAGCATTCCTCTTTTATCTTAAGTATTGCTCATTTGTACTCCCAGACATTCTATTTGTTGCAATCAATTAAATGGTGATATGTGGTGATCTTTAGCCCTTGATTAATTTTGGCTGCGAGTTTCGATATTGAAACAATTTATGTTTCTGATGCTATTGGTGCAGAAGGGTTCTTCAAAGGATTTATTGCTCAGTCTCGAAGAAATGTGCCACAAGCATTTAAAGAAATGGTAGGACCAGATATTCTTTTGATTATTGTCTGTTGAGCTATAAAAAACATTGCCAAGTTTGTGTCTGCTTGTGCAGAACAGTCTGTTTAATGTTGTCTTGAGACCGAAGTACAATGGTGTTTAAAGAGATCAAATTAAAAAATTGCAAACAGTTTGTATTGTTTGATCGCCTTCTTATATTTCAGTTTTTTAACATTAAGTTTTCTTTTTGTTCTTTTTAGCAATCTAGTTTTTAATAGAATACAAACTGATAAAGCATGCTTTTGTATGCTTATGCATGTGTGACTTACTTTCAATGGAATTTGCTCGTTCTGCTGAGCAACTAACATCAAGGTTCTCCTTGTGTTTCATATAGATGTTCTTAAATCATTGTATTTATGTTGGAAGTGATAGTCTTCGTGACCTCAGCAAATCTCCAAACTTTGGCATTTCATTGTCATGCTACATCTTTCTTTCATACTATTGATTTTTTTTGCCACAATCTTAGTATATCTAGAAATAAATTCAACTATCTAACTTAAAATTATAATATGCAGCAGTCAAGCCATCACAACTGAAAATAAACCAGGTATTCTCTTATTCTGTTTTTAAAGTAATTAGTTAAGCTATTTTGTTTTTCTGTTTTTTAATACAAAACGAAATGATTGATTTTAATTGCACATTTTCTATTTTGTTGGATTTGATCCGTAGATGAAGAAACGGTGAAAGAGGTTGCTGATGGTAGGGTCCCTGAAGCACAAGAGGAACGGACAAAAAAGTCCAAGGATAAAAAGAAAATAAAAAAGAACACAGTTCCTGAGATGTATGTGGATGCTGCAGAAAATGAGAAATCAGAACCCGTCCATGCGGAGAGTTTGAATAACTCCAATGGCACTACTGTCCATGATGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGACTGTTGCTACAATTTCCAATGATACAGCTGTAGATTCTATTGGATTGAATGGTGATGTCGCCTCTCTTGAAGAAAAGGTTGTCAAATCCAAAACAAAGAAGAAAAAGGATGGTCGACATTTAAGTGATGAAAAGGAAAAGGAACAGAATGTATCTGTTGTTGATGAACAGAATGACATTTCTAAGAAAAGGAAAAGGCTGGCTTCTGAAGATAACAACATTCCTGCTGTTGATGAGAAAGAAACCGAAGATGTCAAACGTAGAAAATTAGAATGTTCAAAAGGAGGCAACGTTAGTTTGCAGTCTACAAAGGTTGATGTAGATGCTGGAAATAGGAGCGCTATCAATGAGCTTTCTCAGCAGACAAATGAATCTGTTGAAAAAACGGCAGAGAAAACTTCCACAAAGAAAGCTTTTAAGAAACACTCAAATGGTTCAACCGAGGTATGTTAATCTAGCCTGTGCAAATCTTTTGAGGATACAACTATTTTGAGACAGTTTAATATGCTATATGCATGAGAAAAAGTGATGCTCTATCTTCAATCCTTTCAATGTTAAACTAGACTTCTGTTGGTTTATCGGGATTACGTGGCGCTTGTTTGAAATTACTTTCTAAGTACAAGCATTTTCATTGCGCTTTAGAAACACATTTTTAAGCACTCAACAAGTGTTTCCAAGTACACCTAGATCAACATTAATAATGGGATGGACCCTACGAAGGTATGAAAAAGCATAATTAACTTGTAAAGTCCACGAGCATGCTAAATATCCCTCAACTAAGCAGCTCTGCTACTCTTTTTTTTTTTTAATATATGTGTATATATATTATTACTATTACTATTGGTTTTAGTTTCATATCTGAAGCTGGTTGTGATACTGGCAGGAGAATGAAAAACATAAATGTTAATTTGAATAGGATAGTTGCTACGAGTGAAATTTACTAATCATAATTGTAGCCAATGGCCAGTGAACATAAGAGTAGTGGGATCAATGTTTTAAATTTTAATCTTTCCCTTAACTCAGATGTTCATTCTACACGTACTTCATACAGCTGATGTATTGTATTATTGCAGCCAAAGACCATCAATGCATTTCAGAGGGTAAAAGTAGATGCCGTGACATTTGCTGATGAAAAACTTGCAGACAATTCTTACTGGGCGAAGGTGTGATTTGCTGCTTTATTATTTAACTTTTAGCCGCCGCCTTTTCCACTAGGATCTTTTGTTTCTTATTTGTAATCTATCATTTCATACCGAGCAGGGTGGAGCCGAGTCTGGGTATGGTGCAAAAGCTCAAGAAGTTCTTGGGCAGGTTAAAGGAAGGTGATACATTTTATTCTTCTTTCATTTCTACTTAACTTTTATCACGTAGCTTTTACTTTTAGTTCTAGTTTCAGTTCTACTGCTGCTTCCTTGCTAAAACTGACACTGAATTGTGTGGAGGGAATTTTGATATGTTTTCTGGTTTAGAAAAAGGCTCTTGATTCAAATTTATCATGTATTAGGGACTTTCGGCATGAAAAGACAAAGAAGAAGCGTGGGTCGTACCGAGGCGGTGTGATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCTGATGATGATTAATGACATGAATGGATTCACTATTCTGGTTCTTAACTGCTTCCGATCAAATCATGAATGAAGTTTCCATTTCATGGAAAAAAAATTGGTTGTATGTTCCATGGGAACTCAAAAGAACTGGCATTTCTATATTTATCATCAATTTTTTGAGGGAGTCCATCCAAAAAATGGGCTATGCCTAATCAATTTTGAACTTATTATTGTGCAGGTTGTAGTTCTCCAAATGCTTTACTTCATATATGTATGTTTATTGTTGTAACTGCGGCAACTGTGGATTGATTTTTGAATGAAACATACAATATTTTCCCA

mRNA sequence

CTCCGGTCCCGCCTTTTTCTGCAGCCATAGCATCTCTACAATCTTCTCTCTGATTCCCGACTCTTCTTCTGCTCATCATCCACAGTTCACTACATTCTTCAGCTTGTCTGTCTTCAAAGTTCAAACATTTATAGTCATTGGAAGGATGCTTGAAGAAAAAGGATGTTTTAAACCTCGCCAAGTTCTTCTCTCACACCACACTATGAAGCAAAGCAACAACCACACCCAAGCTCCCAATTCTGCCGATGAAGCCCTATCTTTACACCCTCAGCACAGGACTCTTCTTCTTCACGCTGTAGCCTTCTTTTTGGAGCGCAATGGTTTCTCCAAAACCCTCAAAAAGTTTCGTTCCGAAGCCCAGATTCAGAAGGGTTCTTCAAAGGATTTATTGCTCAGTCTCGAAGAAATGTGCCACAAGCATTTAAAGAAATGCAGTCAAGCCATCACAACTGAAAATAAACCAGATGAAGAAACGGTGAAAGAGGTTGCTGATGGTAGGGTCCCTGAAGCACAAGAGGAACGGACAAAAAAGTCCAAGGATAAAAAGAAAATAAAAAAGAACACAGTTCCTGAGATGTATGTGGATGCTGCAGAAAATGAGAAATCAGAACCCGTCCATGCGGAGAGTTTGAATAACTCCAATGGCACTACTGTCCATGATGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGACTGTTGCTACAATTTCCAATGATACAGCTGTAGATTCTATTGGATTGAATGGTGATGTCGCCTCTCTTGAAGAAAAGGTTGTCAAATCCAAAACAAAGAAGAAAAAGGATGGTCGACATTTAAGTGATGAAAAGGAAAAGGAACAGAATGTATCTGTTGTTGATGAACAGAATGACATTTCTAAGAAAAGGAAAAGGCTGGCTTCTGAAGATAACAACATTCCTGCTGTTGATGAGAAAGAAACCGAAGATGTCAAACGTAGAAAATTAGAATGTTCAAAAGGAGGCAACGTTAGTTTGCAGTCTACAAAGGTTGATGTAGATGCTGGAAATAGGAGCGCTATCAATGAGCTTTCTCAGCAGACAAATGAATCTGTTGAAAAAACGGCAGAGAAAACTTCCACAAAGAAAGCTTTTAAGAAACACTCAAATGGTTCAACCGAGCCAAAGACCATCAATGCATTTCAGAGGGTAAAAGTAGATGCCGTGACATTTGCTGATGAAAAACTTGCAGACAATTCTTACTGGGCGAAGGGTGGAGCCGAGTCTGGGTATGGTGCAAAAGCTCAAGAAGTTCTTGGGCAGGTTAAAGGAAGGGACTTTCGGCATGAAAAGACAAAGAAGAAGCGTGGGTCGTACCGAGGCGGTGTGATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCTGATGATGATTAATGACATGAATGGATTCACTATTCTGGTTCTTAACTGCTTCCGATCAAATCATGAATGAAGTTTCCATTTCATGGAAAAAAAATTGGTTGTATGTTCCATGGGAACTCAAAAGAACTGGCATTTCTATATTTATCATCAATTTTTTGAGGGAGTCCATCCAAAAAATGGGCTATGCCTAATCAATTTTGAACTTATTATTGTGCAGGTTGTAGTTCTCCAAATGCTTTACTTCATATATGTATGTTTATTGTTGTAACTGCGGCAACTGTGGATTGATTTTTGAATGAAACATACAATATTTTCCCA

Coding sequence (CDS)

ATGCTTGAAGAAAAAGGATGTTTTAAACCTCGCCAAGTTCTTCTCTCACACCACACTATGAAGCAAAGCAACAACCACACCCAAGCTCCCAATTCTGCCGATGAAGCCCTATCTTTACACCCTCAGCACAGGACTCTTCTTCTTCACGCTGTAGCCTTCTTTTTGGAGCGCAATGGTTTCTCCAAAACCCTCAAAAAGTTTCGTTCCGAAGCCCAGATTCAGAAGGGTTCTTCAAAGGATTTATTGCTCAGTCTCGAAGAAATGTGCCACAAGCATTTAAAGAAATGCAGTCAAGCCATCACAACTGAAAATAAACCAGATGAAGAAACGGTGAAAGAGGTTGCTGATGGTAGGGTCCCTGAAGCACAAGAGGAACGGACAAAAAAGTCCAAGGATAAAAAGAAAATAAAAAAGAACACAGTTCCTGAGATGTATGTGGATGCTGCAGAAAATGAGAAATCAGAACCCGTCCATGCGGAGAGTTTGAATAACTCCAATGGCACTACTGTCCATGATGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGACTGTTGCTACAATTTCCAATGATACAGCTGTAGATTCTATTGGATTGAATGGTGATGTCGCCTCTCTTGAAGAAAAGGTTGTCAAATCCAAAACAAAGAAGAAAAAGGATGGTCGACATTTAAGTGATGAAAAGGAAAAGGAACAGAATGTATCTGTTGTTGATGAACAGAATGACATTTCTAAGAAAAGGAAAAGGCTGGCTTCTGAAGATAACAACATTCCTGCTGTTGATGAGAAAGAAACCGAAGATGTCAAACGTAGAAAATTAGAATGTTCAAAAGGAGGCAACGTTAGTTTGCAGTCTACAAAGGTTGATGTAGATGCTGGAAATAGGAGCGCTATCAATGAGCTTTCTCAGCAGACAAATGAATCTGTTGAAAAAACGGCAGAGAAAACTTCCACAAAGAAAGCTTTTAAGAAACACTCAAATGGTTCAACCGAGCCAAAGACCATCAATGCATTTCAGAGGGTAAAAGTAGATGCCGTGACATTTGCTGATGAAAAACTTGCAGACAATTCTTACTGGGCGAAGGGTGGAGCCGAGTCTGGGTATGGTGCAAAAGCTCAAGAAGTTCTTGGGCAGGTTAAAGGAAGGGACTTTCGGCATGAAAAGACAAAGAAGAAGCGTGGGTCGTACCGAGGCGGTGTGATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCTGATGATGATTAA

Protein sequence

MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD

Homology

[Close]

BLAST of MELO3C006422.jh1 vs. NCBI nr
Match: XP_008438518.1 (PREDICTED: nucleolar and coiled-body phosphoprotein 1 [Cucumis melo])

HSP 1 Score: 785 bits (2026), Expect = 3.31e-285
Identity = 420/424 (99.06%), Postives = 422/424 (99.53%), Query Frame = 0


Query: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKD 180
           EAQEERTKKSKDKKKIKKN VPEMYVDAAENEKSEPVHAESLNNSNGTTVHD+AGKKSKD
Sbjct: 121 EAQEERTKKSKDKKKIKKNAVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDDAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQ 240
           KKKKKNKEKLETVATISND AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQ
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQ 240

Query: 241 NVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDA 300
           NVSVVDEQNDISKKRKRLASEDN+IPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDA
Sbjct: 241 NVSVVDEQNDISKKRKRLASEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDA 300

Query: 301 GNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEK 360
           GNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEK
Sbjct: 301 GNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEK 360

Query: 361 LADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY 420
           LADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
Sbjct: 361 LADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY 420

Query: 421 SDDD 424
           SDDD
Sbjct: 421 SDDD 424

[Close]

BLAST of MELO3C006422.jh1 vs. NCBI nr
Match: TYK17308.1 (nucleolar and coiled-body phosphoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 741 bits (1913), Expect = 2.67e-268
Identity = 400/405 (98.77%), Postives = 401/405 (99.01%), Query Frame = 0


Query: 20  MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 79
           MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK
Sbjct: 1   MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 60

Query: 80  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 139
           DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN
Sbjct: 61  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 120

Query: 140 TVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISND 199
            VPEMYVDAAENEKSEPVHAESLNN NGTTVHDEAGKKSKDKKKKKNKEKLET ATISND
Sbjct: 121 AVPEMYVDAAENEKSEPVHAESLNNFNGTTVHDEAGKKSKDKKKKKNKEKLETAATISND 180

Query: 200 TAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 259
            AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA
Sbjct: 181 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 240

Query: 260 SEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 319
           SEDN+IPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK
Sbjct: 241 SEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 300

Query: 320 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 379
           TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK
Sbjct: 301 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 360

Query: 380 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 424
           AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 405

[Close]

BLAST of MELO3C006422.jh1 vs. NCBI nr
Match: KAA0049250.1 (nucleolar and coiled-body phosphoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 729 bits (1882), Expect = 1.90e-263
Identity = 398/413 (96.37%), Postives = 399/413 (96.61%), Query Frame = 0


Query: 20  MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 79
           MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK
Sbjct: 1   MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 60

Query: 80  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 139
           DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN
Sbjct: 61  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 120

Query: 140 TVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISND 199
            VPEMYVDAAENEKSEPVHAESLNN NGTTVHDEAGKKSKDKKKKKNKEKLET ATISND
Sbjct: 121 AVPEMYVDAAENEKSEPVHAESLNNFNGTTVHDEAGKKSKDKKKKKNKEKLETAATISND 180

Query: 200 TAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 259
            AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA
Sbjct: 181 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 240

Query: 260 SEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 319
           SEDN+IPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK
Sbjct: 241 SEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 300

Query: 320 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 379
           TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK
Sbjct: 301 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 360

Query: 380 AQEVLGQVKG--------RDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 424
           AQEVLGQ K         RDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 361 AQEVLGQKKALDSNLSCIRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 413

[Close]

BLAST of MELO3C006422.jh1 vs. NCBI nr
Match: XP_004134062.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 706 bits (1823), Expect = 2.99e-254
Identity = 387/428 (90.42%), Postives = 398/428 (92.99%), Query Frame = 0


Query: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60
           MLEE+GCFKPRQVLLSHHTMKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQI+KGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIEKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKD 180
           EAQEE TKKSKDKKKIKKN VPE +VDAAE EKSEPV  ESL NSN TTVHDEAGKKSKD
Sbjct: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPV--ESLKNSNDTTVHDEAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE- 240
           KKKKKNKEKLETVATISND AVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   + 
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQL 240

Query: 241 ---QNVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKV 300
               N+   +EQNDISKKRKRLASEDN+IPAV+EK TEDVKRRKLECSKGG+ S+QSTKV
Sbjct: 241 NDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKV 300

Query: 301 DVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTF 360
           DVDAGNRS INE+S QTNE VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTF
Sbjct: 301 DVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTF 360

Query: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 420
           ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSV
Sbjct: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSV 420

Query: 421 KFNYSDDD 424
           KFNYSDDD
Sbjct: 421 KFNYSDDD 426

[Close]

BLAST of MELO3C006422.jh1 vs. NCBI nr
Match: XP_011650932.1 (nucleolar and coiled-body phosphoprotein 1 isoform X3 [Cucumis sativus])

HSP 1 Score: 700 bits (1807), Expect = 7.88e-252
Identity = 386/428 (90.19%), Postives = 397/428 (92.76%), Query Frame = 0


Query: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60
           MLEE+GCFKPRQVLLSHHTMKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQI+KGSSKDLLLSLEEMCHKHLKKC QAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIEKGSSKDLLLSLEEMCHKHLKKC-QAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKD 180
           EAQEE TKKSKDKKKIKKN VPE +VDAAE EKSEPV  ESL NSN TTVHDEAGKKSKD
Sbjct: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPV--ESLKNSNDTTVHDEAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE- 240
           KKKKKNKEKLETVATISND AVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   + 
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQL 240

Query: 241 ---QNVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKV 300
               N+   +EQNDISKKRKRLASEDN+IPAV+EK TEDVKRRKLECSKGG+ S+QSTKV
Sbjct: 241 NDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKV 300

Query: 301 DVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTF 360
           DVDAGNRS INE+S QTNE VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTF
Sbjct: 301 DVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTF 360

Query: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 420
           ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSV
Sbjct: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSV 420

Query: 421 KFNYSDDD 424
           KFNYSDDD
Sbjct: 421 KFNYSDDD 425

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy Swiss-Prot
Match: E9Q5C9 (Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-12
Identity = 98/356 (27.53%), Postives = 152/356 (42.70%), Query Frame = 0


Query: 91  KHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKNTVPEMYVDAAE 150
           K  +  S +  +++  DE   K V+  + P+     T K    K +   T P+    + +
Sbjct: 366 KKAESSSDSSDSDSSEDEAPAKPVSTTKSPKPAV--TPKPSAAKAV---TTPKQPAGSNQ 425

Query: 151 NEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISNDTAVDSIGLNGD 210
             +S    + S    + ++  +EA KKS    K K   K              S   +  
Sbjct: 426 KPQSRKADSSSSEEESSSSEEEEASKKSATTPKAKVTAKAAPAKQAPQAAGDSSSDSDSS 485

Query: 211 VASLEEKVVKSKTKKKKDGRHLS--------DEKEKEQNVSVVDEQNDISKKRKR----- 270
            +  EEK  K   KKK  G  +S        + K    + S   E +   +K+K+     
Sbjct: 486 SSEEEEKTPKPPAKKKAAGGAVSTPAPGKKAEAKSSSSSSSSSSEDSSEEEKKKKPKATT 545

Query: 271 ---LASEDNNIPA-----------VDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNR 330
               AS+ N  PA            +E+E E  +++K   +K G            +G +
Sbjct: 546 PKIQASKANGTPASLNGKAAKESEEEEEEEETEEKKKAAGTKPG------------SGKK 605

Query: 331 SAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLAD 390
              NE + +      K   K  T   F K   G  E +  + F+RV+ + +   D ++AD
Sbjct: 606 RKQNETADEATTPQAKKV-KLETPNTFPKRKKG--ERRASSPFRRVREEEIE-VDSRVAD 665

Query: 391 NSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420
           NS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +SVKF+
Sbjct: 666 NSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 700

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy Swiss-Prot
Match: Q14978 (Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.8e-10
Identity = 86/298 (28.86%), Postives = 140/298 (46.98%), Query Frame = 0


Query: 122 AQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDK 181
           ++EE+TKK     K K      + + A +  +      +S ++S+ ++  +E  K SK  
Sbjct: 433 SEEEKTKKMVATTKPKATAKAALSLPAKQAPQGS---RDSSSDSDSSSSEEEEEKTSKSA 492

Query: 182 KKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQN 241
            KKK ++     A     +A      + + +S ++   + + K K  G     +  K   
Sbjct: 493 VKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSP-RPQAPKANG 552

Query: 242 VSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAG 301
            S +  QN  + K               E+E E+ K+  +  SK G  SL+  K      
Sbjct: 553 TSALTAQNGKAAKN-------------SEEEEEEKKKAAVVVSKSG--SLKKRKQ----- 612

Query: 302 NRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKL 361
                NE +++  E+ +    K  T   F K   G  E +  + F+RV+ + +   D ++
Sbjct: 613 -----NEAAKEA-ETPQAKKIKLQTPNTFPKRKKG--EKRASSPFRRVREEEIE-VDSRV 672

Query: 362 ADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420
           ADNS+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +S+KF+
Sbjct: 673 ADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 697

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy Swiss-Prot
Match: P41777 (Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc1 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 5.4e-08
Identity = 96/355 (27.04%), Postives = 153/355 (43.10%), Query Frame = 0


Query: 91  KHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKNTVPEMYVDAAE 150
           K  +  S +  +++  DE   K V+  + P ++   T K    K +     P       +
Sbjct: 367 KKAESSSDSSDSDSSEDEAPAKPVSATKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQ 426

Query: 151 NEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKL--ETVATISNDTAVDSIGLN 210
           + K++   +E  ++S+     +EA KKS    K +   K      A  +     DS   +
Sbjct: 427 SRKADSSSSEEESSSS----EEEATKKSVTTPKARVTAKAAPSLPAKQAPRAGGDSSSDS 486

Query: 211 GDVASLEEKVVKSKTKKKKDGRHLSDEK---------EKEQNVSVVDEQNDISKKR---- 270
              +S EEK    K   KK     +  K         E   + S  ++ ++  KK+    
Sbjct: 487 ESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSSSEDSSEEEKKKPKSK 546

Query: 271 ---KRLASEDNNIPA--------VDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRS 330
              K  A + N +PA          E+E ED ++ K           ++      +G + 
Sbjct: 547 ATPKPQAGKANGVPASQNGKAGKESEEEEEDTEQNK-----------KAAGTKPGSGKKR 606

Query: 331 AINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADN 390
             NE + +      K   K  T   F K   G  E +  + F+RV+ + +   D ++ADN
Sbjct: 607 KHNETADEAATPQSKKV-KLQTPNTFPKRKKG--EKRASSPFRRVREEEIE-VDSRVADN 666

Query: 391 SYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420
           S+ AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +SVKF+
Sbjct: 667 SFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 702

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy Swiss-Prot
Match: P32583 (Suppressor protein SRP40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRP40 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 7.9e-07
Identity = 84/350 (24.00%), Postives = 138/350 (39.43%), Query Frame = 0


Query: 69  SEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTK 128
           S +     SS D   S E          S + +++    E   ++    R  E+  E  K
Sbjct: 80  SSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAK 139

Query: 129 KSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKE 188
           ++K     K  T PE    +  +       +ES + S   +    +   S D +     +
Sbjct: 140 ETK-----KAKTEPESSSSSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESD 199

Query: 189 KLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQ 248
              + ++ S+D++ DS   + D +S  +    S +         S + + + + S     
Sbjct: 200 SQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSS--------SSDSDSDSDSS---SD 259

Query: 249 NDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINE 308
           +D S      +S D+   + DE  + D      +   G +  L++ +   D    S   E
Sbjct: 260 SDSSGSSDSSSSSDS---SSDESTSSDSSDSDSDSDSGSSSELETKEATAD---ESKAEE 319

Query: 309 LSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWA 368
               +NES    +  +S  K          +      F RV    + F   +L DN+Y  
Sbjct: 320 TPASSNESTPSASSSSSANKLNIPAGTDEIKEGQRKHFSRVDRSKINFEAWELTDNTY-- 379

Query: 369 KGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKF 419
             GA   +G KA E LG+V+G+DF   K K KRGSYRGG I L+S S KF
Sbjct: 380 -KGAAGTWGEKANEKLGRVRGKDFTKNKNKMKRGSYRGGSITLESGSYKF 404

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AWK1 (nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103483590 PE=4 SV=1)

HSP 1 Score: 785 bits (2026), Expect = 1.60e-285
Identity = 420/424 (99.06%), Postives = 422/424 (99.53%), Query Frame = 0


Query: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKD 180
           EAQEERTKKSKDKKKIKKN VPEMYVDAAENEKSEPVHAESLNNSNGTTVHD+AGKKSKD
Sbjct: 121 EAQEERTKKSKDKKKIKKNAVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDDAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQ 240
           KKKKKNKEKLETVATISND AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQ
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQ 240

Query: 241 NVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDA 300
           NVSVVDEQNDISKKRKRLASEDN+IPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDA
Sbjct: 241 NVSVVDEQNDISKKRKRLASEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDA 300

Query: 301 GNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEK 360
           GNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEK
Sbjct: 301 GNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEK 360

Query: 361 LADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY 420
           LADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY
Sbjct: 361 LADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNY 420

Query: 421 SDDD 424
           SDDD
Sbjct: 421 SDDD 424

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D1D6 (Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001630 PE=4 SV=1)

HSP 1 Score: 741 bits (1913), Expect = 1.29e-268
Identity = 400/405 (98.77%), Postives = 401/405 (99.01%), Query Frame = 0


Query: 20  MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 79
           MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK
Sbjct: 1   MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 60

Query: 80  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 139
           DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN
Sbjct: 61  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 120

Query: 140 TVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISND 199
            VPEMYVDAAENEKSEPVHAESLNN NGTTVHDEAGKKSKDKKKKKNKEKLET ATISND
Sbjct: 121 AVPEMYVDAAENEKSEPVHAESLNNFNGTTVHDEAGKKSKDKKKKKNKEKLETAATISND 180

Query: 200 TAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 259
            AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA
Sbjct: 181 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 240

Query: 260 SEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 319
           SEDN+IPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK
Sbjct: 241 SEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 300

Query: 320 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 379
           TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK
Sbjct: 301 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 360

Query: 380 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 424
           AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 361 AQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 405

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U1N0 (Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004900 PE=4 SV=1)

HSP 1 Score: 729 bits (1882), Expect = 9.21e-264
Identity = 398/413 (96.37%), Postives = 399/413 (96.61%), Query Frame = 0


Query: 20  MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 79
           MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK
Sbjct: 1   MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 60

Query: 80  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 139
           DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN
Sbjct: 61  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 120

Query: 140 TVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISND 199
            VPEMYVDAAENEKSEPVHAESLNN NGTTVHDEAGKKSKDKKKKKNKEKLET ATISND
Sbjct: 121 AVPEMYVDAAENEKSEPVHAESLNNFNGTTVHDEAGKKSKDKKKKKNKEKLETAATISND 180

Query: 200 TAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 259
            AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA
Sbjct: 181 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLA 240

Query: 260 SEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 319
           SEDN+IPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK
Sbjct: 241 SEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNESVEK 300

Query: 320 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 379
           TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK
Sbjct: 301 TAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAK 360

Query: 380 AQEVLGQVKG--------RDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 424
           AQEVLGQ K         RDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 361 AQEVLGQKKALDSNLSCIRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 413

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L738 (LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135020 PE=4 SV=1)

HSP 1 Score: 613 bits (1580), Expect = 2.82e-218
Identity = 347/428 (81.07%), Postives = 357/428 (83.41%), Query Frame = 0


Query: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60
           MLEE+GCFKPRQVLLSHHTMKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQI+ GSSKDLLLSLEEMCHKHLKKCSQAITTENKP              
Sbjct: 61  SKTLKKFRSEAQIE-GSSKDLLLSLEEMCHKHLKKCSQAITTENKP-------------- 120

Query: 121 EAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDEAGKKSKD 180
                                        E EKSEPV  ESL NSN TTVHDEAGKKSKD
Sbjct: 121 -----------------------------EKEKSEPV--ESLKNSNDTTVHDEAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE- 240
           KKKKKNKEKLETVATISND AVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   + 
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQL 240

Query: 241 ---QNVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVKRRKLECSKGGNVSLQSTKV 300
               N+   +EQNDISKKRKRLASEDN+IPAV+EK TEDVKRRKLECSKGG+ S+QSTKV
Sbjct: 241 NDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKV 300

Query: 301 DVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTF 360
           DVDAGNRS INE+S QTNE VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTF
Sbjct: 301 DVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTF 360

Query: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 420
           ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSV
Sbjct: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSV 382

Query: 421 KFNYSDDD 424
           KFNYSDDD
Sbjct: 421 KFNYSDDD 382

[Close]

BLAST of MELO3C006422.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JJ58 (nucleolar and coiled-body phosphoprotein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484917 PE=4 SV=1)

HSP 1 Score: 548 bits (1412), Expect = 6.60e-192
Identity = 326/437 (74.60%), Postives = 352/437 (80.55%), Query Frame = 0


Query: 8   FKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKF 67
           FKPRQVLLSHH MKQ N+  Q P SADEA SLHP+ RTLLLHAVAFFLE NGFSKTLKKF
Sbjct: 16  FKPRQVLLSHHAMKQRND-AQTPKSADEAASLHPEQRTLLLHAVAFFLEHNGFSKTLKKF 75

Query: 68  RSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERT 127
           RSEAQI+K SSK+LLLSLEEMCHKH KK SQA+T +NKPDEE V EV D RVPE QEE  
Sbjct: 76  RSEAQIEKDSSKELLLSLEEMCHKHFKKFSQAVTPQNKPDEEIVTEVTDDRVPEEQEEPA 135

Query: 128 KKSKDKKKIKKNTVPEMYVDAAENEKSEPVHAESLNNSNGT------TVHDEAGKKSKDK 187
           KKSKDKKKIKKNTV       A+ EKSEP H ESL NSNGT      TVH+EAGKKSKDK
Sbjct: 136 KKSKDKKKIKKNTV-------ADKEKSEPAHVESLKNSNGTEPSEGTTVHEEAGKKSKDK 195

Query: 188 KKKKNKEKLETVATISNDT-------AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSD 247
           KKKKNKEK++TVATI +D        AVDS GLNG+VA+L+EKVVKSK+KKKKDGRHLSD
Sbjct: 196 KKKKNKEKIKTVATIPDDVTVARDSQAVDSNGLNGNVATLDEKVVKSKSKKKKDGRHLSD 255

Query: 248 EKEKEQNVSVV----DEQNDISKKRKRLASEDNNIP---AVDEKETEDVKRRKLECSKGG 307
               + N        +E ND SKKRKRLASEDN+     AVD+KETEDVKRRKLE SKG 
Sbjct: 256 TNSNQLNDGTKMLHEEEHNDNSKKRKRLASEDNDSHDSHAVDDKETEDVKRRKLEGSKGC 315

Query: 308 NVSLQSTKVDVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQ 367
           N  + STKVDV        NELSQ+T+  VEKTAEKTS+KK +KK SNGSTEPKTINAFQ
Sbjct: 316 NDGVLSTKVDV--------NELSQETD--VEKTAEKTSSKKPWKKSSNGSTEPKTINAFQ 375

Query: 368 RVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGG 424
           RVKVDAVTFADEKLADNSYWAKGGAE+GYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGG
Sbjct: 376 RVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGG 434

[Close]

BLAST of MELO3C006422.jh1 vs. TAIR 10
Match: AT5G57120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). )

HSP 1 Score: 163.3 bits (412), Expect = 4.2e-40
Identity = 151/388 (38.92%), Postives = 194/388 (50.00%), Query Frame = 0


Query: 38  SLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCS 97
           +L  + + LLL +VA +LER GFSK  KK  SEA+I+K      L  LEE+  + L K  
Sbjct: 9   ALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEKKELNTSLPDLEEIFSEFLNKRD 68

Query: 98  QAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKNTVPEMYVDAAENEKSEPV 157
                    +   V+ V          E  KK K KKK K     E  V+  E EK +  
Sbjct: 69  HEAAANGNTEANVVEAV----------ENVKKDKKKKKNK-----ETKVEVTEEEKVKET 128

Query: 158 HAESLNNSNGTTVHDEAGKKSKDKKKKKNKEKLETVATISNDTAVDSIGLNGDVASLEEK 217
            A             E G K K KKKK+ K K+     +    AV   G+          
Sbjct: 129 DAVI-----------EDGVKEK-KKKKETKVKVTEEEKVKETDAVIEDGV---------- 188

Query: 218 VVKSKTKKKKDGRHLSDEKEKEQNVSVVDEQNDISKKRKRLASEDNNIPAVDEKETEDVK 277
               K KKKK        K K ++V   D++  +SKKRKR  SE        E + E+ K
Sbjct: 189 ----KEKKKK--------KSKSKSVEADDDKEKVSKKRKR--SEPEETKEETEDDDEESK 248

Query: 278 RRKLECSKGGNVSLQSTKVDVDAG-NRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNG 337
           RRK E             V+ D G   + + E   + N + EK+  K++ +K+ K  SN 
Sbjct: 249 RRKKE----------ENVVENDEGVQETPVKETETKENGNAEKSETKSTNQKSGKGLSN- 308

Query: 338 STEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEK 397
           S EPK    FQRV VD + + +     NSY++KGGAE GYG KAQEVLGQV+GRDFRHEK
Sbjct: 309 SKEPK--KPFQRVNVDEIVYTEN---SNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEK 329

Query: 398 TKKKRGSYRGGVIDLQSHSVKFNYSDDD 425
           TKKKRGSYRGG+ID +SHS KFN SDD+
Sbjct: 369 TKKKRGSYRGGLIDQESHSTKFNNSDDE 329

The following BLAST results are available for this feature:

BLAST of MELO3C006422.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438518.1	3.31e-285	99.06	PREDICTED: nucleolar and coiled-body phosphoprotein 1 [Cucumis melo]	[more]
TYK17308.1	2.67e-268	98.77	nucleolar and coiled-body phosphoprotein 1 [Cucumis melo var. makuwa]	[more]
KAA0049250.1	1.90e-263	96.37	nucleolar and coiled-body phosphoprotein 1 [Cucumis melo var. makuwa]	[more]
XP_004134062.1	2.99e-254	90.42	nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucumis sativus]	[more]
XP_011650932.1	7.88e-252	90.19	nucleolar and coiled-body phosphoprotein 1 isoform X3 [Cucumis sativus]	[more]

BLAST of MELO3C006422.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E9Q5C9	3.6e-12	27.53	Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=...	[more]
Q14978	5.8e-10	28.86	Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1...	[more]
P41777	5.4e-08	27.04	Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc...	[more]
P32583	7.9e-07	24.00	Suppressor protein SRP40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]

BLAST of MELO3C006422.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AWK1	1.60e-285	99.06	nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo OX=3656 GN=LOC1034835...	[more]
A0A5D3D1D6	1.29e-268	98.77	Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7U1N0	9.21e-264	96.37	Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0L738	2.82e-218	81.07	LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135020 PE=4 S...	[more]
A0A6J1JJ58	6.60e-192	74.60	nucleolar and coiled-body phosphoprotein 1-like isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of MELO3C006422.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57120.1	4.2e-40	38.92	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 43..75 e-value: 0.0043 score: 26.3
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 43..75 score: 9.22886
IPR007718	Srp40, C-terminal	PFAM	PF05022	SRP40_C	coord: 346..418 e-value: 2.9E-27 score: 95.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..141
None	No IPR available	PANTHER	PTHR23216	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 7..423
None	No IPR available	PANTHER	PTHR23216:SF2	LIS1 HOMOLOGY MOTIF, SRP40-RELATED	coord: 7..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006422.jh1.t1	MELO3C006422.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding