MELO3C006240 (gene) Melon (DHL92) v4

Overview
NameMELO3C006240
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 1904158 .. 1904394 (+)
RNA-Seq ExpressionMELO3C006240
SyntenyMELO3C006240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

mRNA sequence

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

Coding sequence (CDS)

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

Protein sequence

MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV
Homology
[Close]
BLAST of MELO3C006240 vs. NCBI nr
Match: KAA0049083.1 (hypothetical protein E6C27_scaffold171G003120 [Cucumis melo var. makuwa] >TYK17480.1 hypothetical protein E5676_scaffold434G003450 [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 5.8e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60
          MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV
Sbjct: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60

Query: 61 EKHLKGNWILYCSLKLSV 79
          EKHLKGNWILYCSLKLSV
Sbjct: 61 EKHLKGNWILYCSLKLSV 78

[Close]
BLAST of MELO3C006240 vs. NCBI nr
Match: KAE8650283.1 (hypothetical protein Csa_011158, partial [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 4.3e-09
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60
          MSRLLSEIPHAPNT      F    +    P     P G+WAAAQSAIKADLAYLDRTI
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59

[Close]
BLAST of MELO3C006240 vs. ExPASy TrEMBL
Match: A0A5D3D1J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003450 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.8e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60
          MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV
Sbjct: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60

Query: 61 EKHLKGNWILYCSLKLSV 79
          EKHLKGNWILYCSLKLSV
Sbjct: 61 EKHLKGNWILYCSLKLSV 78

[Close]
BLAST of MELO3C006240 vs. ExPASy TrEMBL
Match: A0A0A0L4H2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127160 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60
          MSRLLSEIPHAPNT      F    +    P     P G+WAAAQSAIKADLAYLDRTI
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59

The following BLAST results are available for this feature:
BLAST of MELO3C006240 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049083.15.8e-38100.00hypothetical protein E6C27_scaffold171G003120 [Cucumis melo var. makuwa] >TYK174... [more]
KAE8650283.14.3e-0962.71hypothetical protein Csa_011158, partial [Cucumis sativus][more]
BLAST of MELO3C006240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C006240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D1J12.8e-38100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L4H22.1e-0962.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127160 PE=4 SV=1[more]
BLAST of MELO3C006240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006240.1MELO3C006240.1mRNA