MELO3C006052 (gene) Melon (DHL92) v4

Overview


Name	MELO3C006052
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Copper ion binding protein
Location	chr06: 771836 .. 774417 (-)
RNA-Seq Expression	MELO3C006052
Synteny	MELO3C006052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTACCCGGAGCCCGAAATGGTGTTAATTTCGGGCGGTGGGCTGTGGTGAACCTTCGTCAAGAAAAACCCTATTTGATGGTGAAGGTGGTTAGTAAGGGGTTTTAGCTCCGAGCTTTGAGACATGATCCGTTTCACGAAATTCAAATCTCTCTCCCTATATGCGGATTCCAGCGCCCACCAATTGCTTCAAAGATGCTGGGTGAGTGGTACTGCCAAAGGCAAATCGAAGATCAAAGCTGGCCAACCGCTGAAGCGCTCCAAAATTACCGTTAAAAAGGGTGGAGCCGCTTCCAAAGGTGGTGATAGTGGTGGAGGAAAGAAAATCTCTCCTGAAGAGGAAAAGCTCTATGATCAATGCCTAAATGCTCCTACTCCTCTGCGGTTCTTGAAAGCTAAAGAAAGAGAACGCGAGGCCGAGCGAGAGAAGCTTGGGCTCATGAGCAAAGAGCGGCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCGTCGATTATTGGAACTCCGGGTTTGGATTTGATTTCGCTAGGTGTAGTCGACGCGGATAAGATTCCGAAGTATGAGTTGACAGTGGAAGATGGGCGGCGACTTGCGAAGGAATACAGTCGGGTGTTGATGAGGCAACATCGTGCAAGACGGGCAGCTGAATCGACGCTGTTGAAGATGAAGAAGGAAGCTATTGAAGCATTACCAGATCATTTGAAAGCTGCTGCTTTGGTTCCAGATATGACCCCGTTCCCCGCAGACAGGTTCATGGCGACTTTGACGCCTCCAATCGAAGGGTATATGGAAAAGATCGATGAAGCAGCAAAGAGGAGTAGCGCAAAAGAGAAACTTAGATGATCAAAGAGGTCAGAAATTTCTTTTGCTTGTGTTCTAATTTAATTTCCCCAAACTTATCCAGTAGATTGGTATTTTTATTCCAGTTGTAGTGATATTTTCGGAGACTGCATTGCTCAAGTATAGGCAATATCAATATGTTGAATCATAATTTGAACGGTTGAGTCGAAAACTTATCTGACCTTAGTGATGAGCTAGCTATGGAAAAGAAAAGCAGTATTCATTTTGGTGGTTATCTTTTGTCTCAAAATTTCCTGTTTTGGTCTAATACAATTACAAAATTGGACTCTTTACCGGTTTAGGAAACAACATTCAGGATTTAATATAGATTTGAGGGGAGGCTTCTACCTTCTCAACTGAGGAATTGCTGACTTGTGCTTTTCACATTCATATTGGTAAATTTAATGTGCATTTTTTCCATTATTAGGAGGATTTTTCCATTTCCTGGCTAAGGAACCAGTTTATCTTCTGGATAAAACCCTGTAACCCAAGATCTTGGTTAGCTGAAGTTGAAAGGGGTTCATTGTCAAAACTCGAAAGACATGTTTTATGAATTACCTGGCTAAGGAACCAAATTGTCTTCTAAATAAATCCAACCTTGTTCCGTCAAGATCTTGGTATGGAATAGCTCAAGCTGAATCGGGCGAGCCATTGTAAGGAACGCAAAGTCATGTTTTATGAATTCCACTACTGTTCATGTTTTTGGGAACTCATGTAGAAGTATAATCTGACTTATATCTTTTCCTTTGCTTCCTACCATTTGCTTCAAAGTTAAACAATTACTAAGGTCCCATTATGACGCTATCTCCTTAAGCTAAAGGAGGAAGCTCTGGCGGTTCAAGAGAATCTTCATTGTCTTCCTCATAGCTACTCGTTCAATTTTTGTTGGTTTTATCTGGTCAAATATCAGAAAACCACTCGGAAAACAGGCACTTTGCTCAGCTCTGAGACTTCCAAAGGTTCCCACGGTCAACTGGCGTCACATCTAAAAGAATCATACAATTTGACATTTTATAGTGCCTTTGATTATCACCGTGTGGAGAAAATATTCCCGATATATCCAATAGTCAAACTAAGAGAATATAGTACATTTTACCACATTGTTCATAAAAATGCGAATGCTTTCTAGATTTCATGGTTATACATTGTCATGTTCGTAGTATATGATATACTAAACCTTTCTTGTCTGATGGTTCATCTTCATTTGCATTGGTTTATTCTGTCCCCTAATATTTCACTCTGGGAATCTAGAGACATAAAATTATTTGCTCGTTAGGAGCTGATAACTGATGAGATTTCCTATGGTGCAATCACATTGATTATTATTGTTGTTTCTTTCTTGTTTTTCTTTGTTTGCATTAGATTACAAGTGGATGAAGCTTGCAGGTTGGATAAGAAGAGTTCGTAGCAGTTAGAATCTGAAAACCAAAGCTCGTGGTTGCATTTCTTTAAAAGAAGAGCCACGAAGTAGTAGGATGTGTGGTAACAATAAGGTCTCCTGAATTTTTCAAGATTGTAACTTCAAGGCTTTTTCAAGAAAATGCTTGGAGCAACATTCTTCCTTTACCGTTATCATTATTATTTATCACTATTTTTGGGGGTTGGTTTTCTGTTTTTGGATTGATTTCGATGGGGTTTGTGATATTTTCAATTCCACAGGTTTCTTTTGTCAAATTTAACACCTTTTTCCCCTGTTGAGAAAGAAAATTATTTTCACAT

mRNA sequence

GCTACCCGGAGCCCGAAATGGTGTTAATTTCGGGCGGTGGGCTGTGGTGAACCTTCGTCAAGAAAAACCCTATTTGATGGTGAAGGTGGTTAGTAAGGGGTTTTAGCTCCGAGCTTTGAGACATGATCCGTTTCACGAAATTCAAATCTCTCTCCCTATATGCGGATTCCAGCGCCCACCAATTGCTTCAAAGATGCTGGGTGAGTGGTACTGCCAAAGGCAAATCGAAGATCAAAGCTGGCCAACCGCTGAAGCGCTCCAAAATTACCGTTAAAAAGGGTGGAGCCGCTTCCAAAGGTGGTGATAGTGGTGGAGGAAAGAAAATCTCTCCTGAAGAGGAAAAGCTCTATGATCAATGCCTAAATGCTCCTACTCCTCTGCGGTTCTTGAAAGCTAAAGAAAGAGAACGCGAGGCCGAGCGAGAGAAGCTTGGGCTCATGAGCAAAGAGCGGCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCGTCGATTATTGGAACTCCGGGTTTGGATTTGATTTCGCTAGGTGTAGTCGACGCGGATAAGATTCCGAAGTATGAGTTGACAGTGGAAGATGGGCGGCGACTTGCGAAGGAATACAGTCGGGTGTTGATGAGGCAACATCGTGCAAGACGGGCAGCTGAATCGACGCTGTTGAAGATGAAGAAGGAAGCTATTGAAGCATTACCAGATCATTTGAAAGCTGCTGCTTTGGTTCCAGATATGACCCCGTTCCCCGCAGACAGGTTCATGGCGACTTTGACGCCTCCAATCGAAGGGTATATGGAAAAGATCGATGAAGCAGCAAAGAGGAGTAGCGCAAAAGAGAAACTTAGATGATCAAAGAGATTACAAGTGGATGAAGCTTGCAGGTTGGATAAGAAGAGTTCGTAGCAGTTAGAATCTGAAAACCAAAGCTCGTGGTTGCATTTCTTTAAAAGAAGAGCCACGAAGTAGTAGGATGTGTGGTAACAATAAGGTCTCCTGAATTTTTCAAGATTGTAACTTCAAGGCTTTTTCAAGAAAATGCTTGGAGCAACATTCTTCCTTTACCGTTATCATTATTATTTATCACTATTTTTGGGGGTTGGTTTTCTGTTTTTGGATTGATTTCGATGGGGTTTGTGATATTTTCAATTCCACAGGTTTCTTTTGTCAAATTTAACACCTTTTTCCCCTGTTGAGAAAGAAAATTATTTTCACAT

Coding sequence (CDS)

ATGATCCGTTTCACGAAATTCAAATCTCTCTCCCTATATGCGGATTCCAGCGCCCACCAATTGCTTCAAAGATGCTGGGTGAGTGGTACTGCCAAAGGCAAATCGAAGATCAAAGCTGGCCAACCGCTGAAGCGCTCCAAAATTACCGTTAAAAAGGGTGGAGCCGCTTCCAAAGGTGGTGATAGTGGTGGAGGAAAGAAAATCTCTCCTGAAGAGGAAAAGCTCTATGATCAATGCCTAAATGCTCCTACTCCTCTGCGGTTCTTGAAAGCTAAAGAAAGAGAACGCGAGGCCGAGCGAGAGAAGCTTGGGCTCATGAGCAAAGAGCGGCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCGTCGATTATTGGAACTCCGGGTTTGGATTTGATTTCGCTAGGTGTAGTCGACGCGGATAAGATTCCGAAGTATGAGTTGACAGTGGAAGATGGGCGGCGACTTGCGAAGGAATACAGTCGGGTGTTGATGAGGCAACATCGTGCAAGACGGGCAGCTGAATCGACGCTGTTGAAGATGAAGAAGGAAGCTATTGAAGCATTACCAGATCATTTGAAAGCTGCTGCTTTGGTTCCAGATATGACCCCGTTCCCCGCAGACAGGTTCATGGCGACTTTGACGCCTCCAATCGAAGGGTATATGGAAAAGATCGATGAAGCAGCAAAGAGGAGTAGCGCAAAAGAGAAACTTAGATGA

Protein sequence

MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGGDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMDKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARRAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRSSAKEKLR

Homology

[Close]

BLAST of MELO3C006052 vs. NCBI nr
Match: XP_008437945.1 (PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo] >ADN34170.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0048916.1 Copper ion binding isoform 2 [Cucumis melo var. makuwa] >TYK17652.1 Copper ion binding isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-127
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
           DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SAKEKLR 248
           SAKEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of MELO3C006052 vs. NCBI nr
Match: XP_004133827.1 (uncharacterized protein LOC101213243 [Cucumis sativus] >KGN56453.1 hypothetical protein Csa_011059 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 1.8e-117
Identity = 227/247 (91.90%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSL ADS AHQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
           D GGGKKI P++EKLYDQCLNAPTPLRFLKAKEREREA+REKLGL+SKERQREI+MMKMD
Sbjct: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLG+VDADKIPKYELTVEDG+RLAKEYSRVLM+QHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAE+ LLKMK EAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGY+EKIDEAAK+S
Sbjct: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240

Query: 241 SAKEKLR 248
           + KEKLR
Sbjct: 241 TGKEKLR 247

[Close]

BLAST of MELO3C006052 vs. NCBI nr
Match: XP_038906439.1 (uncharacterized protein LOC120092349 [Benincasa hispida])

HSP 1 Score: 418.3 bits (1074), Expect = 4.6e-113
Identity = 219/247 (88.66%), Postives = 235/247 (95.14%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSL+L ADS  HQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGA SKGG
Sbjct: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGATSKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
             GGG+KI PE+EKLYDQCLNAPTPLRFLK K+REREAEREKLGL+SKERQREIEMMKMD
Sbjct: 61  GGGGGRKIPPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLG+SD+PSIIGT GLDLISLG+VDADKIPKYELTVEDGRRLAKEYSRVLMR+HRARR
Sbjct: 121 KSKLGVSDTPSIIGTVGLDLISLGLVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAESTLL+MKKEAIEALP+HLKAAALVPD+T FPA+RFMATLTPPIEGY+EK+ EAA+RS
Sbjct: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTLFPANRFMATLTPPIEGYIEKVKEAARRS 240

Query: 241 SAKEKLR 248
           S KEKLR
Sbjct: 241 SGKEKLR 247

[Close]

BLAST of MELO3C006052 vs. NCBI nr
Match: XP_022980123.1 (uncharacterized protein LOC111479606 [Cucurbita maxima])

HSP 1 Score: 405.2 bits (1040), Expect = 4.0e-109
Identity = 215/248 (86.69%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAA-SKG 60
           MIRF K KSL   ADS +H LLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAA SKG
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60

Query: 61  GDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKM 120
           G  GGG+KISPE+EKLYDQCLNAPTPLRFLK K+REREAEREKLGL+SKERQREIEMMKM
Sbjct: 61  GGGGGGRKISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120

Query: 121 DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRAR
Sbjct: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKR 240
           +AAESTLL+MKK+AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EK+ EAAK 
Sbjct: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAKS 240

Query: 241 SSAKEKLR 248
           SS KEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of MELO3C006052 vs. NCBI nr
Match: XP_023527048.1 (uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 215/248 (86.69%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAA-SKG 60
           MIRF K KSL   ADS +H LLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAA SKG
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60

Query: 61  GDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKM 120
           G  GGG+KIS E+EKLYDQCLNAPTPLRFLK K+REREAEREKLGL+SKERQREIEMMKM
Sbjct: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120

Query: 121 DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRAR
Sbjct: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKR 240
           +AAESTLL+MKK+AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EKI+E AKR
Sbjct: 181 QAAESTLLRMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEVAKR 240

Query: 241 SSAKEKLR 248
           SS KEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of MELO3C006052 vs. ExPASy TrEMBL
Match: A0A5D3D1D4 (Copper ion binding isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005240 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
           DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SAKEKLR 248
           SAKEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of MELO3C006052 vs. ExPASy TrEMBL
Match: E5GCH1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
           DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SAKEKLR 248
           SAKEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of MELO3C006052 vs. ExPASy TrEMBL
Match: A0A1S3AVT5 (uncharacterized protein LOC103483214 OS=Cucumis melo OX=3656 GN=LOC103483214 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
           DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SAKEKLR 248
           SAKEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of MELO3C006052 vs. ExPASy TrEMBL
Match: A0A0A0L3Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119830 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.7e-118
Identity = 227/247 (91.90%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSL ADS AHQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
           D GGGKKI P++EKLYDQCLNAPTPLRFLKAKEREREA+REKLGL+SKERQREI+MMKMD
Sbjct: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLG+VDADKIPKYELTVEDG+RLAKEYSRVLM+QHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180

Query: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240
           AAE+ LLKMK EAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGY+EKIDEAAK+S
Sbjct: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240

Query: 241 SAKEKLR 248
           + KEKLR
Sbjct: 241 TGKEKLR 247

[Close]

BLAST of MELO3C006052 vs. ExPASy TrEMBL
Match: A0A6J1IYC8 (uncharacterized protein LOC111479606 OS=Cucurbita maxima OX=3661 GN=LOC111479606 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109
Identity = 215/248 (86.69%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAA-SKG 60
           MIRF K KSL   ADS +H LLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAA SKG
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60

Query: 61  GDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKM 120
           G  GGG+KISPE+EKLYDQCLNAPTPLRFLK K+REREAEREKLGL+SKERQREIEMMKM
Sbjct: 61  GGGGGGRKISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120

Query: 121 DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRAR
Sbjct: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKR 240
           +AAESTLL+MKK+AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EK+ EAAK 
Sbjct: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAKS 240

Query: 241 SSAKEKLR 248
           SS KEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of MELO3C006052 vs. TAIR 10
Match: AT4G05400.1 (copper ion binding )

HSP 1 Score: 283.1 bits (723), Expect = 2.1e-76
Identity = 154/253 (60.87%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKK----GGAA 60
           MIR TK K++    +S ++ L+QRC  SGT KGK+K+K GQPLKR+K+++KK    GGA 
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGGGGGGAP 60

Query: 61  SKGGDSGGGK-KISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIE 120
            +G ++  GK +IS E++KLY+QCLNAP P+R+L  +E EREA+REKLGL+SKE+QR++E
Sbjct: 61  VEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDME 120

Query: 121 MMKM-DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMR 180
           + K    + +G++D P  IGTPGLD ISLG+ +A+++PKY+LT EDG RLAKEYS+VLMR
Sbjct: 121 IQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMR 180

Query: 181 QHRARRAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKID 240
           +HR RRAAE+ LL +KK AIEALP++LK AAL PD+TPFPA+R MATLTPPIEGY+EK+ 
Sbjct: 181 EHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVM 240

Query: 241 EAAKRSSAKEKLR 248
           +AAK+SS+KEKLR
Sbjct: 241 DAAKKSSSKEKLR 250

[Close]

BLAST of MELO3C006052 vs. TAIR 10
Match: AT4G05400.2 (copper ion binding )

HSP 1 Score: 283.1 bits (723), Expect = 2.1e-76
Identity = 154/253 (60.87%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKK----GGAA 60
           MIR TK K++    +S ++ L+QRC  SGT KGK+K+K GQPLKR+K+++KK    GGA 
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGGGGGGAP 60

Query: 61  SKGGDSGGGK-KISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIE 120
            +G ++  GK +IS E++KLY+QCLNAP P+R+L  +E EREA+REKLGL+SKE+QR++E
Sbjct: 61  VEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDME 120

Query: 121 MMKM-DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMR 180
           + K    + +G++D P  IGTPGLD ISLG+ +A+++PKY+LT EDG RLAKEYS+VLMR
Sbjct: 121 IQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMR 180

Query: 181 QHRARRAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKID 240
           +HR RRAAE+ LL +KK AIEALP++LK AAL PD+TPFPA+R MATLTPPIEGY+EK+ 
Sbjct: 181 EHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVM 240

Query: 241 EAAKRSSAKEKLR 248
           +AAK+SS+KEKLR
Sbjct: 241 DAAKKSSSKEKLR 250

[Close]

BLAST of MELO3C006052 vs. TAIR 10
Match: AT4G21140.1 (BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 265.8 bits (678), Expect = 3.5e-71
Identity = 146/249 (58.63%), Postives = 190/249 (76.31%), Query Frame = 0


Query: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRF + K +    DS ++ LLQ+C+ SGT KGKSK+K GQ LKR+K+T+KKGG     G
Sbjct: 1   MIRFARPKPI---IDSVSYNLLQKCYASGTPKGKSKLKTGQSLKRNKLTIKKGGG---NG 60

Query: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120
              GG ++   + ++ DQC+NAP P+R+L+ KEREREA REKLGL+SK RQ+EI+  K  
Sbjct: 61  GGRGGDEVDKGKGRISDQCINAPCPVRYLRPKEREREARREKLGLISKARQKEIDFQKKG 120

Query: 121 KS-KLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 180
            S  +G++ +P  IGTPGLD ISLG+   D++PKY++TVEDG RLAKEYSRVLMR+HRAR
Sbjct: 121 GSFTMGVTTAPMRIGTPGLDYISLGIFTEDELPKYKVTVEDGIRLAKEYSRVLMREHRAR 180

Query: 181 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKI-DEAAK 240
           R AE +L+KM+  A+EALP++LK AALV D+TPFP  R  ATLTPPIEGY+E+I + AA+
Sbjct: 181 RVAEISLMKMRNAAVEALPENLKKAALVRDLTPFPVSRGTATLTPPIEGYLERIMNAAAR 240

Query: 241 RSSAKEKLR 248
           +SS KEKLR
Sbjct: 241 KSSGKEKLR 243

The following BLAST results are available for this feature:

BLAST of MELO3C006052 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437945.1	2.5e-127	100.00	PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo] >ADN34170.1 hypot...	[more]
XP_004133827.1	1.8e-117	91.90	uncharacterized protein LOC101213243 [Cucumis sativus] >KGN56453.1 hypothetical ...	[more]
XP_038906439.1	4.6e-113	88.66	uncharacterized protein LOC120092349 [Benincasa hispida]	[more]
XP_022980123.1	4.0e-109	86.69	uncharacterized protein LOC111479606 [Cucurbita maxima]	[more]
XP_023527048.1	1.2e-108	86.69	uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C006052 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C006052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1D4	1.2e-127	100.00	Copper ion binding isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCH1	1.2e-127	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3AVT5	1.2e-127	100.00	uncharacterized protein LOC103483214 OS=Cucumis melo OX=3656 GN=LOC103483214 PE=...	[more]
A0A0A0L3Z1	8.7e-118	91.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119830 PE=4 SV=1	[more]
A0A6J1IYC8	1.9e-109	86.69	uncharacterized protein LOC111479606 OS=Cucurbita maxima OX=3661 GN=LOC111479606...	[more]

BLAST of MELO3C006052 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05400.1	2.1e-76	60.87	copper ion binding	[more]
AT4G05400.2	2.1e-76	60.87	copper ion binding	[more]
AT4G21140.1	3.5e-71	58.63	BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..72
IPR039145	39S ribosomal protein L40, mitochondrial	PANTHER	PTHR13359	39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL	coord: 1..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006052.1	MELO3C006052.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005762	mitochondrial large ribosomal subunit