Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGAGGTTCCAAGAGCTGAAGAGGAAATTTGATAGGCTGAAACCTCTTGCTGAAAAGCAAGAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACGTGACTATTGCTTGCCTTATATGGAACCGCCTGTTCGTCGTTGGTATGTATCACATTTCTTCCTCCCTCTCCCTCCTCAATTGCACTCATCATTTGTGGATGGTTTTAGGCTTCAGCCTTGCCTCTACTTCTCTCTACCTTTTGTTTTTCCTTGAGGCTGCTTTCATGTTGTATCGGGCTCAAAATCAATTGGATATTATTTGCAAGCAACAGAATGAAATCTCCCAACAGATTTTGAATACTGGAAACCCAGATGATTATGAGGGTGGAGATTCAATTTCAAGTGATAATGGGTGGTTGGAGTTGAGTTTCGAGGTGCAGTTACTTCATGAGTACCACCGGCCATTATTTACACTTGTCCAGAGAAAATTTTATATTGCTTCCACTATATCTACTCTACTTGCTGTTGCTGCTTTTGA
mRNA sequence
ATGGCCATGAGGTTCCAAGAGCTGAAGAGGAAATTTGATAGGCTGAAACCTCTTGCTGAAAAGCAAGAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACGTGACTATTGCTTGCCTTATATGGAACCGCCTGTTCGTCGTTGGTATGTATCACATTTCTTCCTCCCTCTCCCTCCTCAATTGCACTCATCATTTGTGGATGGTTTTAGGCTTCAGCCTTGCCTCTACTTCTCTCTACCTTTTGTTTTTCCTTGAGGCTGCTTTCATGTTGTATCGGGCTCAAAATCAATTGGATATTATTTGCAAGCAACAGAATGAAATCTCCCAACAGATTTTGAATACTGGAAACCCAGATGATTATGAGGGTGGAGATTCAATTTCAAGTGATAATGGGTGGTTGGAGTTGAGTTTCGAGGTGCAGTTACTTCATGAGTACCACCGGCCATTATTTACACTTGTCCAGAGAAAATTTTATATTGCTTCCACTATATCTACTCTACTTGCTGTTGCTGCTTTTGA
Coding sequence (CDS)
ATGGCCATGAGGTTCCAAGAGCTGAAGAGGAAATTTGATAGGCTGAAACCTCTTGCTGAAAAGCAAGAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACGTGACTATTGCTTGCCTTATATGGAACCGCCTGTTCGTCGTTGGTATGTATCACATTTCTTCCTCCCTCTCCCTCCTCAATTGCACTCATCATTTGTGGATGGTTTTAGGCTTCAGCCTTGCCTCTACTTCTCTCTACCTTTTGTTTTTCCTTGAGGCTGCTTTCATGTTGTATCGGGCTCAAAATCAATTGGATATTATTTGCAAGCAACAGAATGAAATCTCCCAACAGATTTTGAATACTGGAAACCCAGATGATTATGAGGGTGGAGATTCAATTTCAAGTGATAATGGGTGGTTGGAGTTGAGTTTCGAGGTGCAGTTACTTCATGAGTACCACCGGCCATTATTTACACTTGTCCAGAGAAAATTTTATATTGCTTCCACTATATCTACTCTACTTGCTGTTGCTGCTTTT
Protein sequence
MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSLLNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPDDYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF
Homology
BLAST of MELO3C005854.jh1 vs. NCBI nr
Match:
KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 323 bits (827), Expect = 1.25e-110
Identity = 170/174 (97.70%), Postives = 170/174 (97.70%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIW RLFVVGMYHISSSLSL
Sbjct: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII KQQNEISQQILNTGNPD
Sbjct: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPD 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRK YIASTISTLLAVAAF
Sbjct: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAF 174
BLAST of MELO3C005854.jh1 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 251 bits (640), Expect = 3.49e-82
Identity = 144/174 (82.76%), Postives = 153/174 (87.93%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
D E GD+ SSDNG LELSF+VQLL +YH PL T+VQRK YIASTISTLLAV+AF
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH-PL-TVVQRKIYIASTISTLLAVSAF 171
BLAST of MELO3C005854.jh1 vs. NCBI nr
Match:
KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 248 bits (634), Expect = 2.86e-81
Identity = 144/174 (82.76%), Postives = 152/174 (87.36%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM LKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
D E GD+ SSDNG LELSF+VQLL +YH PL T+VQRK YIASTISTLLAVAAF
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH-PL-TVVQRKIYIASTISTLLAVAAF 171
BLAST of MELO3C005854.jh1 vs. NCBI nr
Match:
XP_008437551.1 (PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo])
HSP 1 Score: 220 bits (561), Expect = 1.45e-70
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLH 145
D E GD+ SSDNG LELSF+ +LH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQEWMLH 145
BLAST of MELO3C005854.jh1 vs. NCBI nr
Match:
XP_011654636.1 (uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetical protein Csa_000251 [Cucumis sativus])
HSP 1 Score: 220 bits (560), Expect = 2.06e-70
Identity = 117/145 (80.69%), Postives = 125/145 (86.21%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM F ELKRKFD LK LAEKQEQRVRYYETRAQN+ IA LIW+RLF VGMYH SSSLSL
Sbjct: 1 MAMEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMV F L+STSLY LFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLH 145
D E GDSISSDNGWLELSF+ +LH
Sbjct: 121 DDEAGDSISSDNGWLELSFQEWMLH 145
BLAST of MELO3C005854.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)
HSP 1 Score: 323 bits (827), Expect = 6.06e-111
Identity = 170/174 (97.70%), Postives = 170/174 (97.70%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIW RLFVVGMYHISSSLSL
Sbjct: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII KQQNEISQQILNTGNPD
Sbjct: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPD 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRK YIASTISTLLAVAAF
Sbjct: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAF 174
BLAST of MELO3C005854.jh1 vs. ExPASy TrEMBL
Match:
E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 251 bits (640), Expect = 1.69e-82
Identity = 144/174 (82.76%), Postives = 153/174 (87.93%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
D E GD+ SSDNG LELSF+VQLL +YH PL T+VQRK YIASTISTLLAV+AF
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH-PL-TVVQRKIYIASTISTLLAVSAF 171
BLAST of MELO3C005854.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 250 bits (638), Expect = 3.40e-82
Identity = 142/174 (81.61%), Postives = 149/174 (85.63%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM F ELKRKFD LK LAEKQEQRVRYYETRAQN+ IA LIW+RLF VGMYH SSSLSL
Sbjct: 1 MAMEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCTHHLWMV F L+STSLY LFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
D E GDSISSDNGWLELSF+VQLL YH FTLVQRK YIASTI TLLAVAAF
Sbjct: 121 DDEAGDSISSDNGWLELSFQVQLL-PYHP--FTLVQRKVYIASTIFTLLAVAAF 171
BLAST of MELO3C005854.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)
HSP 1 Score: 248 bits (634), Expect = 1.38e-81
Identity = 144/174 (82.76%), Postives = 152/174 (87.36%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM LKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKFYIASTISTLLAVAAF 174
D E GD+ SSDNG LELSF+VQLL +YH PL T+VQRK YIASTISTLLAVAAF
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLL-QYH-PL-TVVQRKIYIASTISTLLAVAAF 171
BLAST of MELO3C005854.jh1 vs. ExPASy TrEMBL
Match:
A0A1S3ATY9 (uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=4 SV=1)
HSP 1 Score: 220 bits (561), Expect = 7.02e-71
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 0
Query: 1 MAMRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWNRLFVVGMYHISSSLSL 60
MAM ELKR FD LK LAEKQEQRVRYYETRAQNV IACLIW+RLFVVGMYH SSSLSL
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LNCTHHLWMVLGFSLASTSLYLLFFLEAAFMLYRAQNQLDIICKQQNEISQQILNTGNPD 120
LNCT HLWMVLGFSLASTSLYLLFFLEA FMLYRAQNQLDII K+Q EIS QILNTG+P+
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 DYEGGDSISSDNGWLELSFEVQLLH 145
D E GD+ SSDNG LELSF+ +LH
Sbjct: 121 DDEAGDTFSSDNGGLELSFQEWMLH 145
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0042578.1 | 1.25e-110 | 97.70 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
| ADN33782.1 | 3.49e-82 | 82.76 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| KAA0042580.1 | 2.86e-81 | 82.76 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
| XP_008437551.1 | 1.45e-70 | 82.07 | PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo] | [more] |
| XP_011654636.1 | 2.06e-70 | 80.69 | uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetica... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C430 | 6.06e-111 | 97.70 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
| E5GBE1 | 1.69e-82 | 82.76 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A0A0KM15 | 3.40e-82 | 81.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
| A0A5A7TGW8 | 1.38e-81 | 82.76 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
| A0A1S3ATY9 | 7.02e-71 | 82.07 | uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
