MELO3C005531 (gene) Melon (DHL92) v4

Overview


Name	MELO3C005531
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	polyadenylate-binding protein RBP47B'
Location	chr09: 20923405 .. 20928146 (+)
RNA-Seq Expression	MELO3C005531
Synteny	MELO3C005531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTGAGATATTTTTTCTTTTTTCAAAAGTCACCGTCGTCCCCAGCGCGAAAACAAAAACCCTAGCAGTGGCAAGAGCCAAGAATCCGCAGGTTTTCTTCAAATCTCTCCACTTGTTTATGTTTCTCTCCTAATTTATAAAATCTTTAGCGATTACCAAGCTTTTGCCCCCAAAATCTTTGGAGTCACGGATCAATTTACAGAGACAGCGAAGTGGGAGAGTGTAGAAACAATCTCTCAAACTTTACAAGAACATCAGCAAAGTCAATTACCCGAAGCAATAAGATAATGCGTCAATAGATACGATGGCGACACTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTGGAGGAAGTTAGAACGCTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCATACTGGGGAGGTTCGTTTGTTAGTTTCTTTTCTTTCTTTCTTTCTTTATTATTATTTTTGTAACTTTGGTGTTGAATGGTGATGTTTGTAATCATAAACTCGTTAGGATTTCACCAGTTTCTCTAGCTGATGACGTTGTTGGTATGAAATTTAGATGTGGGTAAGTGGATTCTTGAGGTTTTCTTCTTTCAGTTAGGTCTTTCCAAATAATTTCTCCTGAAATTGTCTGGTGTTTGGAAGTACATTTGGGTGCGTAAAATTAGAACGTATTTGTATCTTGCCCTATTGGTGCCGAGATCTGAAATATGGGCTGAGGGAGAGCCTCTCTTATGAACTTTCATGCCACTGAATGGGGATGAGTTTGATGCACGAGAGCCGTGGTAGTAGAAACACCAATGTATAAAGCTATAGTTTTTTATAGTTGTTTTGCTGTTATATTCCAATACCCTATGCGAATTACAAATGTCTGATGTCTATTTGTTGTTTGTGTTCTAGAATTTGAGTAAGAGCTTGTAACTCAGCTGCATTCGGACAAGAACATTCTGTAGTTTGTTGACTATGCTATATTTTCTAGTGCAGGTAATATCAATTAAAATTATTCGCAACAAGATCACTGGCCAGCCTGAAGGTTACGGGTTTGTGGAATTTGTATCTCATGCTGCAGCAGAAAGAATTTTGCAGACATACAATGGAACTCAGATGCCCGGAACAGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCTGATGCTGGCCCAGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCGCAATACCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGTCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTACTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCTAAAAAAACCATCGGTGTTCAGCAGCAATATAGTCTAGGTAAAGGTAATGAATAATGAATGTTCAGTATTGCCTTTACTCTTCTTCATTTTGTTGTCTCACATTTTCTTGGAGTGAGTACAATCATTTTTACTATTCATCCATGTTTCCAACGCTTTTATCCAAATCAATCAATCAATCAATTAATTTTCCATCCAAGTTTCCAGTGCTTCTAGCTTTTCTATTTGCATAACTGCATGTTATGTTTCATATCTTTGCTAGTAGTCATAGTCGTAGATATGAAACTTTTGGCCTTAAAATTTGAATTTCACCTTTGTCTATGGGAGTTCTTTGTTGGATAGTGCTAAGATCATTTTTTTTTTCTTTTTGCATGATCAAACCTATAGCTAGTAGTTAATAGGTTTGATCATTCTGAAATTTTAGTTGATATTAGCTAAATTAGTGTTCTTGGGTCTATGATGAAAATGTGTTAAATTAATTATTATTTATTGTATATGTCAAAATAGAATTTCTCTCTTATTGAATATTTTGGATAAATATGTTTAGTCAATGTCAAAAATATTTTCTAAATGCCTTGAGGGGAGAGGATATCTGCAAATTTCAAGTAAAAAAGAATTCATTGTTAATGTATTGGTGTTTTTTTCCTTTTCCCTTGAAAAATCTTAAGATGGGATGGTAATTTCCTATTTTAAAACTTGTACTTACCAATGTGTCTCTTGTCTTAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAGTAAGTCAAGGACAAGTGATAGTTTTACTTCGTCTGGTTTCTATGCTCATCTCTTACTACATTGTGCTTTGTGCAGATATTTGTTGGCAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTGCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGTGTGTTTGCATGATTAATTTTATTGATGTAAGTTGAGTAAATCGCATCTCTCCTTGCTCCTGTTTCTATGCCTTGAAAGAAGCTTGTGAACAATAATAAGGTTCAGGGAGTGGGGGGAAAAACATCTTATGGAATAGATGGAAAGTTCTTGTGTATGTACGCTTCTCAAAGATATGTTATTGACTTCTTACTTCACATGAACATTTGGACTTTGGATTTAATATGTTCTCCATATCATGTCCATGCAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGTAACTGTGACCTTCCTACTGAAGTCCAGAACAAATATTTTCCTAGATATACCAGCATACTTTTCCACTGTGGATGTGATATGTATTTATGTGGTTTTCTAATTCATGCTTTTGGGTTTAAATTACAAAACCCTGATTGCTTAATGAGTTTGTGCATAAAACATTAGGCGTGTTGTCTTTTATTTAGCCTGTGAATTTGATATTTCATATCTATGGAAAAATGGCTCGCATTCATCATAGTGAATAATTTTTGCTAAAATACCATTTTTGGTCCGTGTACTTTGAGATTTTTCAATTGTAGTCTTTGTATTTTCAAATGTCCAATTTTAGTTAATGTAGTTTCAAGAAATCTTAAATTCTAAGGACTCAAAGTACAAGGACTATGGTTATTTTGAACAAACCTCAAAAGTATAAGGACTCAAAGTACAGGGACTGTAGTTATTTTGAAAGTATAAGGACTAAAATTGCTAAAATACCTTTCTTTTGTGAACGTTAAATCACCCTAGTACGAAAATAGGATGTAAAGGAAAGGCCTGGAAAGTGGAGATGAGGTATACCTCAGAGAAGTATAAAGACAATCATCTACAAACCTTTATCCGACAGAATCATTTACTTATACTATAATATATTGTTTTTAAATATTTGCTTAGCTAAATGGGTATTTTTTGGTACAGGAAATCGACTCCTTGGTAAAATTGATTATGCATGTTATCTTTCTGTTAGCAAGCTCTCGCAAGTCACAACAGCCTGTTTAATGCTCATAGTGAACTAGAGCTCACTCTATTGGGTAGACTGATGAAATGGTGATGAATTTCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCTTACTATGGGTATGGAGGGACTTATGATGCATATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCATATCCTCAACAGGTAAGTTTCATTTTCTTTAGAAGGCAAGAGCTCCATACTCTTCTATGGTAGATAGTGGGCAAAGTGATTGTTATAATCTATTTGTTTGCAGCCATTTTTCAATTGGAGTCTATTGGGTGAATTCTAATTGCCCTTTCAAGATGCTAAGGCTTAGAATCAGAATAAAATGAGTGGGAATCAAGAGCAATATATTTGTAGAAAAAGGTTCATCCATCCAGAAAATGTATTTGCCTTTTTGATCTTGGAACTATTCATTTTAACTCTTTTCTTTTAGGTTGACGGCGTACAAGATTTGGCCACGGTAGCTGGTGCAGTCCCTTCTGTAGAACAAGGAGAGGAATGGAATGATACGCTGGATACACCGGATGTTGATTAGTAAGGCTCTCTCTTTTGTCCCTAATTAGCTACAATACAAGATCAGGAATGTACAAGTTTCTATTTTTATTTGAACTTGCATTGACATCAAGTTTTTAATTTTGGCAGTTTAAATGATGCATACCTCTCAAAACATGAAAGCGCTATTTTAGGCTGGCCGTTATGGTTGACTACTTCATCACTGGTTAGGCAAACATGAGTGGTTGTTCGTCAAAATATGTTGGCAGTGCGTGAAGGCAACTGGAGAAAAACTACACTATGTGCTTTATATGCTTGACCATACTCATAGTCGATGATATTGACACAATACCGTTGCCATGTACGGTATAATGTGTTTGATTTAATAATACAGTTTTTACTATAGGAACAGGGTTGCCAAGGTTAGGTGCTTTGATGCTCTATGTATTATGATGATGCTCTCAACTATTTGGCAATGGAGTTTTCATATCAGGAGAACATCTGCTTTGATCTGTACTGTGTCTCATTATGCCGAAGTGTACTAGTTGTATTTTGAACAGGCAGCTTAATTGTTTTGTCAGATTAAATTTAGCAAAAAGAAAATGAAGCTGAAATGAAATGGAGTTTTTGAATGAA

mRNA sequence

AAAGTGAGATATTTTTTCTTTTTTCAAAAGTCACCGTCGTCCCCAGCGCGAAAACAAAAACCCTAGCAGTGGCAAGAGCCAAGAATCCGCAGGTTTTCTTCAAATCTCTCCACTTGTTTATGTTTCTCTCCTAATTTATAAAATCTTTAGCGATTACCAAGCTTTTGCCCCCAAAATCTTTGGAGTCACGGATCAATTTACAGAGACAGCGAAGTGGGAGAGTGTAGAAACAATCTCTCAAACTTTACAAGAACATCAGCAAAGTCAATTACCCGAAGCAATAAGATAATGCGTCAATAGATACGATGGCGACACTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTGGAGGAAGTTAGAACGCTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCATACTGGGGAGGTAATATCAATTAAAATTATTCGCAACAAGATCACTGGCCAGCCTGAAGGTTACGGGTTTGTGGAATTTGTATCTCATGCTGCAGCAGAAAGAATTTTGCAGACATACAATGGAACTCAGATGCCCGGAACAGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCTGATGCTGGCCCAGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCGCAATACCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGTCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTACTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCTAAAAAAACCATCGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATATTTGTTGGCAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTGCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCTTACTATGGGTATGGAGGGACTTATGATGCATATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCATATCCTCAACAGCCATTTTTCAATTGGAGTCTATTGGGTGAATTCTAATTGCCCTTTCAAGATGCTAAGGCTTAGAATCAGAATAAAATGAGTGGGAATCAAGAGCAATATATTTGTAGAAAAAGGTTGACGGCGTACAAGATTTGGCCACGGTAGCTGGTGCAGTCCCTTCTGTAGAACAAGGAGAGGAATGGAATGATACGCTGGATACACCGGATGTTGATTATTTAAATGATGCATACCTCTCAAAACATGAAAGCGCTATTTTAGGCTGGCCGTTATGGTTGACTACTTCATCACTGGTTAGGCAAACATGAGTGGTTGTTCGTCAAAATATGTTGGCAGTGCGTGAAGGCAACTGGAGAAAAACTACACTATGTGCTTTATATGCTTGACCATACTCATAGTCGATGATATTGACACAATACCGTTGCCATGTACGGTATAATGTGTTTGATTTAATAATACAGTTTTTACTATAGGAACAGGGTTGCCAAGGTTAGGTGCTTTGATGCTCTATGTATTATGATGATGCTCTCAACTATTTGGCAATGGAGTTTTCATATCAGGAGAACATCTGCTTTGATCTGTACTGTGTCTCATTATGCCGAAGTGTACTAGTTGTATTTTGAACAGGCAGCTTAATTGTTTTGTCAGATTAAATTTAGCAAAAAGAAAATGAAGCTGAAATGAAATGGAGTTTTTGAATGAA

Coding sequence (CDS)

ATGGCGACACTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTGGAGGAAGTTAGAACGCTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCATACTGGGGAGGTAATATCAATTAAAATTATTCGCAACAAGATCACTGGCCAGCCTGAAGGTTACGGGTTTGTGGAATTTGTATCTCATGCTGCAGCAGAAAGAATTTTGCAGACATACAATGGAACTCAGATGCCCGGAACAGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCTGATGCTGGCCCAGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCGCAATACCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGTCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTACTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCTAAAAAAACCATCGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATATTTGTTGGCAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTGCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCTTACTATGGGTATGGAGGGACTTATGATGCATATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCATATCCTCAACAGCCATTTTTCAATTGGAGTCTATTGGGTGAATTCTAA

Protein sequence

MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQPFFNWSLLGEF

Homology

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BLAST of MELO3C005531 vs. NCBI nr
Match: KAE8647897.1 (hypothetical protein Csa_000131 [Cucumis sativus])

HSP 1 Score: 765.0 bits (1974), Expect = 3.0e-217
Identity = 368/370 (99.46%), Postives = 368/370 (99.46%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQP 360
           RNPAAKQDL TWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLY YGAYSGYASYPQQP
Sbjct: 301 RNPAAKQDLTTWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYGYGAYSGYASYPQQP 360

Query: 361 FFNWSLLGEF 371
           FFNWSLLGEF
Sbjct: 361 FFNWSLLGEF 370

[Close]

BLAST of MELO3C005531 vs. NCBI nr
Match: XP_008437079.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo])

HSP 1 Score: 743.0 bits (1917), Expect = 1.2e-210
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 359

[Close]

BLAST of MELO3C005531 vs. NCBI nr
Match: XP_004152401.1 (polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741259.1 polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741261.1 polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus])

HSP 1 Score: 740.0 bits (1909), Expect = 1.0e-209
Identity = 357/359 (99.44%), Postives = 357/359 (99.44%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           RNPAAKQDL TWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLY YGAYSGYASYPQQ
Sbjct: 301 RNPAAKQDLTTWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYGYGAYSGYASYPQQ 359

[Close]

BLAST of MELO3C005531 vs. NCBI nr
Match: XP_038875164.1 (polyadenylate-binding protein RBP47B' [Benincasa hispida])

HSP 1 Score: 738.4 bits (1905), Expect = 3.0e-209
Identity = 356/359 (99.16%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVP LPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPALPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGY SYPQQ
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYGSYPQQ 359

[Close]

BLAST of MELO3C005531 vs. NCBI nr
Match: XP_008437076.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X1 [Cucumis melo] >XP_008437077.1 PREDICTED: polyadenylate-binding protein RBP47B' isoform X1 [Cucumis melo])

HSP 1 Score: 736.9 bits (1901), Expect = 8.7e-209
Identity = 359/364 (98.63%), Postives = 359/364 (98.63%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

[Close]

BLAST of MELO3C005531 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 7.5e-147
Identity = 257/358 (71.79%), Postives = 291/358 (81.28%), Query Frame = 0


Query: 7   QPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV      A      V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQ 361

[Close]

BLAST of MELO3C005531 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.4e-116
Identity = 224/363 (61.71%), Postives = 262/363 (72.18%), Query Frame = 0


Query: 1   MATLAGQPTHHQPT-TVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQ 60
           MAT    P+   PT    EVR+LWIGDLQYW+DE+YL++CF HTGE++S K+IRNK TGQ
Sbjct: 67  MATTNPNPS---PTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQ 126

Query: 61  PEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 120
            EGYGF+EF SHAAAE ILQTYNGT MP  EQ FR+NWAS G GERR D+  EH+IFVGD
Sbjct: 127 SEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGD 186

Query: 121 LAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVY 180
           LA DVTDY+LQETF++ Y SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAM+EMNGV 
Sbjct: 187 LAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVL 246

Query: 181 CSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDP 240
           CSTRPMRI  A  KK +G  Q     KA Y  P  T        + D NNTTIFVG LDP
Sbjct: 247 CSTRPMRIGPAANKKPVGTPQ-----KATYQNPQAT------QGESDPNNTTIFVGGLDP 306

Query: 241 NITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300
            + EE L+Q F  +GE+ +VKI AGK CGFVQFGTRASAE+A+  + G  +G Q +R SW
Sbjct: 307 TVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSW 366

Query: 301 GRNPAAKQ-DLATWGQQVDPNQWSAYYGYGGTYDAYGYG-VVQDPSLYAYGAYSGYASYP 360
           GR+P++KQ D   WG         AYYGYG  Y+AYGY    QDP++Y YG Y GYA+Y 
Sbjct: 367 GRSPSSKQTDQTQWG-----GSGGAYYGYGQGYEAYGYAPPAQDPNMY-YGNYPGYANY- 407

[Close]

BLAST of MELO3C005531 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-110
Identity = 207/353 (58.64%), Postives = 257/353 (72.80%), Query Frame = 0


Query: 8   PTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVE 67
           PT  Q ++ E+ +T+WIGDLQ W+DESYL+SCF+  GEVIS+KIIRNK TGQ E YGFVE
Sbjct: 73  PTQIQSSS-EDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVE 132

Query: 68  FVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDY 127
           F +HAAAE++LQ+YNGT MP TEQ FRLNWA F  GE+R + G + SIFVGDLA DVTD 
Sbjct: 133 FNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDT 192

Query: 128 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 187
           +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+R MRI
Sbjct: 193 MLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 252

Query: 188 SAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVL---PADYDANNTTIFVGNLDPNITEE 247
             ATPKK     +QYS  +A+     Y ++        +D D++NTTIFVG LD  +T+E
Sbjct: 253 GVATPKKP-SAHEQYS-SQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDE 312

Query: 248 ELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPA 307
           EL+Q+F QFGE+  VKIPAGKGCGFVQF  R+SA+EAIQK+ G IIG+Q VR SWGR+PA
Sbjct: 313 ELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPA 372

Query: 308 AKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVV--QDPSLYAYGAYSGYAS 356
            KQ     G     +QW+  Y     Y  YGYG    QD  +YA GA  G +S
Sbjct: 373 NKQMRTDSG-----SQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

[Close]

BLAST of MELO3C005531 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-108
Identity = 208/355 (58.59%), Postives = 250/355 (70.42%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P   +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 252
           KKT GVQ++         VP    +     ++ D NNTTIFVG LDPN+TE+ LKQ F  
Sbjct: 263 KKTTGVQER---------VP----NAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAP 322

Query: 253 FGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATW 312
           +GE+ +VKIP GK CGFVQ+  R SAE+A+  +QG +IG Q VR SWGR+ + KQ     
Sbjct: 323 YGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ----- 382

Query: 313 GQQVDPNQWSA-------YYGYGGTYDAY-GYGVVQDPSLYAYGAYSGYASYPQQ 360
             Q D NQW A       Y GYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 -PQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]

BLAST of MELO3C005531 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.7e-106
Identity = 200/360 (55.56%), Postives = 252/360 (70.00%), Query Frame = 0


Query: 5   AGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +S   +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEI +VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSG---YASYPQQP 361
           + K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG      Y Q P
Sbjct: 347 SNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSGGGYSGGYQQTP 385

[Close]

BLAST of MELO3C005531 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 5.9e-211
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 359

[Close]

BLAST of MELO3C005531 vs. ExPASy TrEMBL
Match: A0A1S3ASS8 (polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 4.2e-209
Identity = 359/364 (98.63%), Postives = 359/364 (98.63%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

[Close]

BLAST of MELO3C005531 vs. ExPASy TrEMBL
Match: A0A6J1DKN0 (polyadenylate-binding protein RBP47B' isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021961 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 6.1e-208
Identity = 353/371 (95.15%), Postives = 360/371 (97.04%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           M TLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQY-SLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY +LGKAMYPVPAYTT VP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+L TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 PFFNWSLLGEF 371
           PF N S+LGEF
Sbjct: 361 PFSNGSILGEF 371

[Close]

BLAST of MELO3C005531 vs. ExPASy TrEMBL
Match: A0A1S3AT51 (polyadenylate-binding protein RBP47B' isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 2.6e-206
Identity = 357/364 (98.08%), Postives = 357/364 (98.08%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSL  AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSL--AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

[Close]

BLAST of MELO3C005531 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.4e-206
Identity = 350/359 (97.49%), Postives = 354/359 (98.61%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLA QPTHHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 359

[Close]

BLAST of MELO3C005531 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 521.5 bits (1342), Expect = 5.3e-148
Identity = 257/358 (71.79%), Postives = 291/358 (81.28%), Query Frame = 0


Query: 7   QPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV      A      V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQ 361

[Close]

BLAST of MELO3C005531 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 517.7 bits (1332), Expect = 7.7e-147
Identity = 252/353 (71.39%), Postives = 285/353 (80.74%), Query Frame = 0


Query: 7   QPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEEL 246
           ISAATPKK +GVQQQY     +    A      V P + D   TTI V NLD N+TEEEL
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEEL 250

Query: 247 KQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAK 306
           K+ F Q GE+ YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +NP   
Sbjct: 251 KKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPG-- 310

Query: 307 QDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ
Sbjct: 311 QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQ 357

[Close]

BLAST of MELO3C005531 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-107
Identity = 200/360 (55.56%), Postives = 252/360 (70.00%), Query Frame = 0


Query: 5   AGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +S   +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEI +VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSG---YASYPQQP 361
           + K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG      Y Q P
Sbjct: 347 SNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSGGGYSGGYQQTP 385

[Close]

BLAST of MELO3C005531 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 381.3 bits (978), Expect = 8.6e-106
Identity = 196/353 (55.52%), Postives = 239/353 (67.71%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P +  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG  MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYSLGKAMYPVPA-YTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTF 252
            K  + +Q            PA Y  +      D D NNTTIFVG LD N+T++ELK  F
Sbjct: 233 NKNALPMQ------------PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIF 292

Query: 253 LQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLA 312
            QFGE+ +VKIP GK CGFVQ+  +ASAE A+  + G  +G Q +R SWGR+P  + D A
Sbjct: 293 GQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQA 352

Query: 313 TWGQQVDPNQWSAYYGY-GGTYDAYGYGV---VQDPSLYAYGAYSGYASYPQQ 360
            W           YYGY       YGY      QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 QW-------NGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

[Close]

BLAST of MELO3C005531 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 376.7 bits (966), Expect = 2.1e-104
Identity = 204/355 (57.46%), Postives = 246/355 (69.30%), Query Frame = 0


Query: 11  HQPTTVEEVRTLWIGDLQYWVDESYLNSCF--AHTGEVISIKIIRNKITGQPEGYGFVEF 70
           HQ     E +T+W+GDLQ W+DE+YLNS F  A   E++S+K+IRNK  G  EGYGFVEF
Sbjct: 94  HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153

Query: 71  VSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDY 130
            SH  A+++LQ +NG  MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAPDV+D 
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213

Query: 131 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 190
           LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273

Query: 191 SAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELK 250
             ATP+KT G QQQ        P  A+T S      + D  NTTIFVG LD ++T+E+LK
Sbjct: 274 GPATPRKTNGYQQQ----GGYMPSGAFTRS------EGDTINTTIFVGGLDSSVTDEDLK 333

Query: 251 QTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQ 310
           Q F +FGEI  VKIP GKGCGFVQF  R +AEEA++K+ G +IG+Q VR SWGRNPA KQ
Sbjct: 334 QPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 393

Query: 311 DLATWGQQ-VDPNQWSAYYGYGGTYDAYGYGVVQ-DPSLY-AYGAYSGYASYPQQ 360
               +G Q VDP     YYG G  Y+ YGY V Q DP +Y A   Y  Y  + QQ
Sbjct: 394 PRDKYGNQWVDP-----YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQ 432

The following BLAST results are available for this feature:

BLAST of MELO3C005531 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647897.1	3.0e-217	99.46	hypothetical protein Csa_000131 [Cucumis sativus]	[more]
XP_008437079.1	1.2e-210	100.00	PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo]	[more]
XP_004152401.1	1.0e-209	99.44	polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741259...	[more]
XP_038875164.1	3.0e-209	99.16	polyadenylate-binding protein RBP47B' [Benincasa hispida]	[more]
XP_008437076.1	8.7e-209	98.63	PREDICTED: polyadenylate-binding protein RBP47B' isoform X1 [Cucumis melo] >XP_0...	[more]

BLAST of MELO3C005531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXZ9	7.5e-147	71.79	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q9LEB4	2.4e-116	61.71	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9LEB3	3.3e-110	58.64	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	1.8e-108	58.59	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	1.7e-106	55.56	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]

BLAST of MELO3C005531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATQ6	5.9e-211	100.00	polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3ASS8	4.2e-209	98.63	polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1DKN0	6.1e-208	95.15	polyadenylate-binding protein RBP47B' isoform X3 OS=Momordica charantia OX=3673 ...	[more]
A0A1S3AT51	2.6e-206	98.08	polyadenylate-binding protein RBP47B' isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HXL5	4.4e-206	97.49	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of MELO3C005531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19350.1	5.3e-148	71.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	7.7e-147	71.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.2	1.2e-107	55.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	8.6e-106	55.52	RNA-binding protein 45A	[more]
AT1G47500.1	2.1e-104	57.46	RNA-binding protein 47C'	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..96 e-value: 2.8E-14 score: 63.4 coord: 114..188 e-value: 3.6E-21 score: 86.3 coord: 231..298 e-value: 1.3E-22 score: 91.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 22..90 e-value: 1.8E-14 score: 53.3 coord: 232..295 e-value: 1.8E-18 score: 66.1 coord: 115..180 e-value: 1.6E-16 score: 59.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 230..302 score: 17.387012
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..100 score: 15.408587
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..192 score: 17.455235
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 101..207 e-value: 1.3E-22 score: 82.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..99 e-value: 2.5E-24 score: 87.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 221..309 e-value: 4.8E-25 score: 89.7
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 9..359
None	No IPR available	PANTHER	PTHR47640:SF6	POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED	coord: 9..359
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 21..101 e-value: 3.21168E-48 score: 155.884
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 229..300 e-value: 2.16673E-38 score: 130.116
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 112..191 e-value: 1.86912E-54 score: 172.078
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..88
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005531.1	MELO3C005531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding