MELO3C005500.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C005500.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	stress-induced protein KIN2-like
Location	chr09: 21605780 .. 21606414 (+)
RNA-Seq Expression	MELO3C005500.jh1
Synteny	MELO3C005500.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGTACTTGAAAAGAAAAAAATCCTCTCCAAGTTCTCAATTTCTTTTTGAAAATTTCCTTTTAAAAGAAATGGCAGATAACTCCCAGAAGATGAGCCATCAGATTGGAGAAGCCAAGGGTCAAGCACAGGTTCTCTCACTACCTCTCTTCATCGTTCTTTATATTTAGCCCCCAAGAGTATCTTAATCTTTTTTGAACTTTTGTTGGTTAAAAACAAAAACCCCATATATATTTAGTAAGTGATTTTGTTTTGTTATGGGATGATAAATATAGGAGAAAGCGAGCAATTTGATGGACAAGGCAGGTGATGCAACTCAATCAGCTAAAGAGTCAGTGCAAGAAGCAGGACAACAGATGAGGGCCAAAGCAGAAGATGCAGCTGATGCCGTCAAGGATGCCACCGGAATGAACAAATGAAGCCTCTACGATACATAAATATGATAGCTTTATAAAATAAATGCTATCGTAGACCTTTTATAGCGTTCTTACAATTTTCCGTTTCTCCATTTTTATGCTCTGCAATGCTTCCTTTTAGTTTTTCCTTGGGCTATGTTATGGCTATTTCTTGTGTCCTCCTCTCAATAAGAGAATAAGAGATATTTGATAAGAATGGTACAAACTTATGCTGTCAA

mRNA sequence

AAATTGTACTTGAAAAGAAAAAAATCCTCTCCAAGTTCTCAATTTCTTTTTGAAAATTTCCTTTTAAAAGAAATGGCAGATAACTCCCAGAAGATGAGCCATCAGATTGGAGAAGCCAAGGGTCAAGCACAGGAGAAAGCGAGCAATTTGATGGACAAGGCAGGTGATGCAACTCAATCAGCTAAAGAGTCAGTGCAAGAAGCAGGACAACAGATGAGGGCCAAAGCAGAAGATGCAGCTGATGCCGTCAAGGATGCCACCGGAATGAACAAATGAAGCCTCTACGATACATAAATATGATAGCTTTATAAAATAAATGCTATCGTAGACCTTTTATAGCGTTCTTACAATTTTCCGTTTCTCCATTTTTATGCTCTGCAATGCTTCCTTTTAGTTTTTCCTTGGGCTATGTTATGGCTATTTCTTGTGTCCTCCTCTCAATAAGAGAATAAGAGATATTTGATAAGAATGGTACAAACTTATGCTGTCAA

Coding sequence (CDS)

ATGGCAGATAACTCCCAGAAGATGAGCCATCAGATTGGAGAAGCCAAGGGTCAAGCACAGGAGAAAGCGAGCAATTTGATGGACAAGGCAGGTGATGCAACTCAATCAGCTAAAGAGTCAGTGCAAGAAGCAGGACAACAGATGAGGGCCAAAGCAGAAGATGCAGCTGATGCCGTCAAGGATGCCACCGGAATGAACAAATGA

Protein sequence

MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVKDATGMNK

Homology

[Close]

BLAST of MELO3C005500.jh1 vs. NCBI nr
Match: XP_008437024.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043489.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (290), Expect = 2.53e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK
Sbjct: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 101 bits (251), Expect = 2.26e-26
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNS+KMS+ IGEAKGQAQEKASNLMDKAGD  QSAKES+QEAGQQM+AKA+ AADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. NCBI nr
Match: XP_038876189.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 99.8 bits (247), Expect = 9.21e-26
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMS+ IGE KGQAQEKASNLMDKAGDA QS KESVQEAGQQ++AKA+DA +AVK
Sbjct: 1  MADNSQKMSYHIGETKGQAQEKASNLMDKAGDAAQSVKESVQEAGQQIKAKAQDATNAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.86e-25
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMS+ +GEAKGQAQEKASN+MDKA D  QSAKES+QEAGQQM+AKA+ AADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 2.64e-25
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQ MS+QIGEAKGQAQEKASN+M+KA DA QSAKES+QE GQQM+AKA+ AADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.9e-04
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 6  QKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVKDAT 64
          Q+ S++ GE +G+AQEK    M   GD TQ+AK+  QE  Q  + KA + A + KD T
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKT 62

[Close]

BLAST of MELO3C005500.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TQL3 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00290 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.22e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK
Sbjct: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. ExPASy TrEMBL
Match: A0A1S3ATJ8 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482577 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.22e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK
Sbjct: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 1.09e-26
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNS+KMS+ IGEAKGQAQEKASNLMDKAGD  QSAKES+QEAGQQM+AKA+ AADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.01e-26
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMS+ +GEAKGQAQEKASN+MDKA D  QSAKES+QEAGQQM+AKA+ AADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.01e-26
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          MADNSQKMS+ +GEAKGQAQEKASN+MDKA D  QSAKES+QEAGQQM+AKA+ AADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 67
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-15
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          M+ NSQ +S Q G+AKGQ QEKAS +MDKA +A QSAKES++E GQQ++ KA+ A ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of MELO3C005500.jh1 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-14
Identity = 40/67 (59.70%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60
          M++NSQ MS   G+AKGQ QEKASNL+DKA +A QSAKES+QE GQQ++ KA+ A++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of MELO3C005500.jh1 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-13
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 3  DNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVKDA 62
          DN Q  S+Q G+A GQ +EKA  +MDKA DA  SA++S+Q+ GQQM+ KA+ AAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of MELO3C005500.jh1 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 43.1 bits (100), Expect = 1.0e-04
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 5  SQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVKDATG 64
          + K + Q G+A G+A+EK++ L+DKA DA  +A  S Q+AG+ +   A    + VKD TG
Sbjct: 4  TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

[Close]

BLAST of MELO3C005500.jh1 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 40.0 bits (92), Expect = 8.5e-04
Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 5  SQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVKDATG 64
          + K + Q G+  G+A+EK++ L+DKA DA   A    Q+AG+ +   A    + VKD TG
Sbjct: 4  TNKNAFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

The following BLAST results are available for this feature:

BLAST of MELO3C005500.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437024.1	2.53e-32	100.00	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043489.1 stress-...	[more]
XP_004152387.1	2.26e-26	86.57	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]
XP_038876189.1	9.21e-26	85.07	stress-induced protein KIN2-like [Benincasa hispida]	[more]
XP_008437025.1	1.86e-25	83.58	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_004152386.1	2.64e-25	83.58	stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C...	[more]

BLAST of MELO3C005500.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96270	4.9e-04	43.10	Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE...	[more]

BLAST of MELO3C005500.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQL3	1.22e-32	100.00	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ATJ8	1.22e-32	100.00	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482577 PE=4 SV...	[more]
A0A0A0KRE1	1.09e-26	86.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]
A0A5A7TJP0	9.01e-26	83.58	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	9.01e-26	83.58	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]

BLAST of MELO3C005500.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	4.8e-15	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	1.1e-14	59.70	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	2.7e-13	60.00	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	1.0e-04	42.86	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT5G15960.1	8.5e-04	39.68	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1430		coord: 1..47 e-value: 3.9E-6 score: 29.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..43
None	No IPR available	PANTHER	PTHR34191:SF23	STRESS-INDUCED PROTEIN KIN1-RELATED	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005500.jh1.t1	MELO3C005500.jh1.t1	mRNA