Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACCAACACAAGAAAGCTCTTGAAACCTCTCATACCTCCAAGCTCATCCCGGAAAAGGATGCTTCATTTATTCAACCACAAGCAAAACACCTCAAAGTATCTAAGAAACCTGAATCTTCTTCCAAGAAATCCAGATCTGAGGGTTCTAGAAAGAAGATCCTCCTCAAGCCTCAAACACAAACATCATCTCCCCAAGCTCACTTCGTTAAACCTGATTTGGAGCAAGCACAAAGGCCTAAAAAGGACGCTACAGATTTCATTCTTGATATAGACGAACTGATGGGGCAAAAAGAGAACATTTGTAAAGGATTGCCAAATTTGGAGCCAGGCATGGAGACGATGTGGCTTGATAAAAACCAGCCCAGATATAAACATACGAAGCATGGGGTTAGTAAGGTGCTTGTGAGTCACATAGAGGCAAGCGATAAGGAAGGAACACAAGTACCTTCTCAGTTTTTTGATAAAGTGTTGGAGTTCATAAAAGAGTTAGAAGCGGCAAAGAGGAAGAAGAGTGAGGTGGTTGAAAGAAAGAAGTCTAAAGATGAGAAAAGAAAAGAAGAGGAGAGAAAGAAGCAAAAGAAGGATGAAGAAAGGACTCTACAAGAGGAGTGGGGTGAGAAGAGCAAAGAATAA
mRNA sequence
ATGGCTGACCAACACAAGAAAGCTCTTGAAACCTCTCATACCTCCAAGCTCATCCCGGAAAAGGATGCTTCATTTATTCAACCACAAGCAAAACACCTCAAAGTATCTAAGAAACCTGAATCTTCTTCCAAGAAATCCAGATCTGAGGGTTCTAGAAAGAAGATCCTCCTCAAGCCTCAAACACAAACATCATCTCCCCAAGCTCACTTCGTTAAACCTGATTTGGAGCAAGCACAAAGGCCTAAAAAGGACGCTACAGATTTCATTCTTGATATAGACGAACTGATGGGGCAAAAAGAGAACATTTGTAAAGGATTGCCAAATTTGGAGCCAGGCATGGAGACGATGTGGCTTGATAAAAACCAGCCCAGATATAAACATACGAAGCATGGGGTTAGTAAGGTGCTTGTGAGTCACATAGAGGCAAGCGATAAGGAAGGAACACAAGTACCTTCTCAGTTTTTTGATAAAGTGTTGGAGTTCATAAAAGAGTTAGAAGCGGCAAAGAGGAAGAAGAGTGAGGTGGTTGAAAGAAAGAAGTCTAAAGATGAGAAAAGAAAAGAAGAGGAGAGAAAGAAGCAAAAGAAGGATGAAGAAAGGACTCTACAAGAGGAGTGGGGTGAGAAGAGCAAAGAATAA
Coding sequence (CDS)
ATGGCTGACCAACACAAGAAAGCTCTTGAAACCTCTCATACCTCCAAGCTCATCCCGGAAAAGGATGCTTCATTTATTCAACCACAAGCAAAACACCTCAAAGTATCTAAGAAACCTGAATCTTCTTCCAAGAAATCCAGATCTGAGGGTTCTAGAAAGAAGATCCTCCTCAAGCCTCAAACACAAACATCATCTCCCCAAGCTCACTTCGTTAAACCTGATTTGGAGCAAGCACAAAGGCCTAAAAAGGACGCTACAGATTTCATTCTTGATATAGACGAACTGATGGGGCAAAAAGAGAACATTTGTAAAGGATTGCCAAATTTGGAGCCAGGCATGGAGACGATGTGGCTTGATAAAAACCAGCCCAGATATAAACATACGAAGCATGGGGTTAGTAAGGTGCTTGTGAGTCACATAGAGGCAAGCGATAAGGAAGGAACACAAGTACCTTCTCAGTTTTTTGATAAAGTGTTGGAGTTCATAAAAGAGTTAGAAGCGGCAAAGAGGAAGAAGAGTGAGGTGGTTGAAAGAAAGAAGTCTAAAGATGAGAAAAGAAAAGAAGAGGAGAGAAAGAAGCAAAAGAAGGATGAAGAAAGGACTCTACAAGAGGAGTGGGGTGAGAAGAGCAAAGAATAA
Protein sequence
MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQTQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKKSKDEKRKEEERKKQKKDEERTLQEEWGEKSKE
Homology
BLAST of MELO3C004725 vs. NCBI nr
Match:
XP_008464070.1 (PREDICTED: stress response protein NST1-like [Cucumis melo])
HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ
Sbjct: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK
Sbjct: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK
Sbjct: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
Query: 181 SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE 213
SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE
Sbjct: 181 SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE 212
BLAST of MELO3C004725 vs. NCBI nr
Match:
TYK25721.1 (stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 206/212 (97.17%), Postives = 209/212 (98.58%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ
Sbjct: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK
Sbjct: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK
Sbjct: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
Query: 181 SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE 213
SKDEKRKEEERKKQKKDEERTLQEEW + ++
Sbjct: 181 SKDEKRKEEERKKQKKDEERTLQEEWERRKRK 212
BLAST of MELO3C004725 vs. NCBI nr
Match:
KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 121.3 bits (303), Expect = 9.9e-24
Identity = 93/205 (45.37%), Postives = 114/205 (55.61%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MA+QHK+ LETS+ S + DAS IQPQA+ + SKKPESSS+K R E
Sbjct: 1 MANQHKENLETSNASMFTLKNDASHIQPQARRPEASKKPESSSQKFRPE----------- 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
EQAQ PKK TD IL+ ++ M ++ENI KGL +L+P METM LD
Sbjct: 61 ---------------EQAQIPKKSTTDSILNANKWMRREENIYKGLLDLKPDMETMRLDD 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
N+P+ KH KH +KVLV H EAS KE VERKK
Sbjct: 121 NRPKNKHLKHEANKVLVGHREASKKE-----------------------------VERKK 150
Query: 181 SKDEKRKEEERKKQKKDEERTLQEE 206
+DEKRK EERKKQKKDE+R ++E
Sbjct: 181 VEDEKRKGEERKKQKKDEDRAQRKE 150
BLAST of MELO3C004725 vs. NCBI nr
Match:
TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 94.0 bits (232), Expect = 1.7e-15
Identity = 81/211 (38.39%), Postives = 111/211 (52.61%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MA+QHK+ LETS+ S + DAS IQPQA+ + SKKPESSS+K R E
Sbjct: 1 MANQHKENLETSNASMFTLKNDASHIQPQARRPEASKKPESSSQKFRPE----------- 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
EQAQ PKK TD IL+ ++ M ++ENI KGL +L+P METM LD
Sbjct: 61 ---------------EQAQIPKKSTTDSILNANKWMRREENIYKGLLDLKPDMETMRLDD 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
N+P+ KH KH +KVLV H EAS KE + E++ K+KK E +
Sbjct: 121 NRPKNKHLKHEANKVLVGHREASKKEAKTK-----------LAEIQTTKKKKQETLASLS 174
Query: 181 SKDEK--RKEEERKKQKKDEERTLQEEWGEK 210
+ E + + + Q+ D + EE+ +
Sbjct: 181 EQVESVVTRSKVAEHQEVDRVDVMVEEFSRE 174
BLAST of MELO3C004725 vs. NCBI nr
Match:
TYJ99671.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])
HSP 1 Score: 79.0 bits (193), Expect = 5.6e-11
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 0
Query: 21 KDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQTQTSSPQAHFVKPDLEQAQR 80
K+ S K K SK+ E+SSK+ EG KKI +KP+TQ SS + ++P+ E+AQR
Sbjct: 288 KNGSSSLSPIKRSKPSKRCEASSKEPIPEGFGKKISIKPRTQESSFHSRSIRPNSEKAQR 347
Query: 81 PKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLD 120
PK+ TD L DE M Q+E+I GL NLEPGM TM LD
Sbjct: 348 PKRSVTDATLKADEWMKQEESIYHGLSNLEPGMGTMRLD 386
BLAST of MELO3C004725 vs. ExPASy TrEMBL
Match:
A0A1S3CKM2 (stress response protein NST1-like OS=Cucumis melo OX=3656 GN=LOC103502045 PE=4 SV=1)
HSP 1 Score: 389.8 bits (1000), Expect = 7.2e-105
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ
Sbjct: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK
Sbjct: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK
Sbjct: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
Query: 181 SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE 213
SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE
Sbjct: 181 SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE 212
BLAST of MELO3C004725 vs. ExPASy TrEMBL
Match:
A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1)
HSP 1 Score: 379.4 bits (973), Expect = 9.8e-102
Identity = 206/212 (97.17%), Postives = 209/212 (98.58%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ
Sbjct: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK
Sbjct: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK
Sbjct: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
Query: 181 SKDEKRKEEERKKQKKDEERTLQEEWGEKSKE 213
SKDEKRKEEERKKQKKDEERTLQEEW + ++
Sbjct: 181 SKDEKRKEEERKKQKKDEERTLQEEWERRKRK 212
BLAST of MELO3C004725 vs. ExPASy TrEMBL
Match:
A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)
HSP 1 Score: 121.3 bits (303), Expect = 4.8e-24
Identity = 93/205 (45.37%), Postives = 114/205 (55.61%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MA+QHK+ LETS+ S + DAS IQPQA+ + SKKPESSS+K R E
Sbjct: 1 MANQHKENLETSNASMFTLKNDASHIQPQARRPEASKKPESSSQKFRPE----------- 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
EQAQ PKK TD IL+ ++ M ++ENI KGL +L+P METM LD
Sbjct: 61 ---------------EQAQIPKKSTTDSILNANKWMRREENIYKGLLDLKPDMETMRLDD 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
N+P+ KH KH +KVLV H EAS KE VERKK
Sbjct: 121 NRPKNKHLKHEANKVLVGHREASKKE-----------------------------VERKK 150
Query: 181 SKDEKRKEEERKKQKKDEERTLQEE 206
+DEKRK EERKKQKKDE+R ++E
Sbjct: 181 VEDEKRKGEERKKQKKDEDRAQRKE 150
BLAST of MELO3C004725 vs. ExPASy TrEMBL
Match:
A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 8.2e-16
Identity = 81/211 (38.39%), Postives = 111/211 (52.61%), Query Frame = 0
Query: 1 MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQ 60
MA+QHK+ LETS+ S + DAS IQPQA+ + SKKPESSS+K R E
Sbjct: 1 MANQHKENLETSNASMFTLKNDASHIQPQARRPEASKKPESSSQKFRPE----------- 60
Query: 61 TQTSSPQAHFVKPDLEQAQRPKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLDK 120
EQAQ PKK TD IL+ ++ M ++ENI KGL +L+P METM LD
Sbjct: 61 ---------------EQAQIPKKSTTDSILNANKWMRREENIYKGLLDLKPDMETMRLDD 120
Query: 121 NQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFFDKVLEFIKELEAAKRKKSEVVERKK 180
N+P+ KH KH +KVLV H EAS KE + E++ K+KK E +
Sbjct: 121 NRPKNKHLKHEANKVLVGHREASKKEAKTK-----------LAEIQTTKKKKQETLASLS 174
Query: 181 SKDEK--RKEEERKKQKKDEERTLQEEWGEK 210
+ E + + + Q+ D + EE+ +
Sbjct: 181 EQVESVVTRSKVAEHQEVDRVDVMVEEFSRE 174
BLAST of MELO3C004725 vs. ExPASy TrEMBL
Match:
A0A5D3BLR6 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00610 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 2.7e-11
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 0
Query: 21 KDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKPQTQTSSPQAHFVKPDLEQAQR 80
K+ S K K SK+ E+SSK+ EG KKI +KP+TQ SS + ++P+ E+AQR
Sbjct: 288 KNGSSSLSPIKRSKPSKRCEASSKEPIPEGFGKKISIKPRTQESSFHSRSIRPNSEKAQR 347
Query: 81 PKKDATDFILDIDELMGQKENICKGLPNLEPGMETMWLD 120
PK+ TD L DE M Q+E+I GL NLEPGM TM LD
Sbjct: 348 PKRSVTDATLKADEWMKQEESIYHGLSNLEPGMGTMRLD 386
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_008464070.1 | 1.5e-104 | 100.00 | PREDICTED: stress response protein NST1-like [Cucumis melo] | [more] |
TYK25721.1 | 2.0e-101 | 97.17 | stress response protein NST1-like [Cucumis melo var. makuwa] | [more] |
KAA0038829.1 | 9.9e-24 | 45.37 | stress response protein NST1-like [Cucumis melo var. makuwa] | [more] |
TYK25768.1 | 1.7e-15 | 38.39 | stress response protein NST1-like [Cucumis melo var. makuwa] | [more] |
TYJ99671.1 | 5.6e-11 | 49.49 | Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CKM2 | 7.2e-105 | 100.00 | stress response protein NST1-like OS=Cucumis melo OX=3656 GN=LOC103502045 PE=4 S... | [more] |
A0A5D3DPW8 | 9.8e-102 | 97.17 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7TBU7 | 4.8e-24 | 45.37 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3DQE7 | 8.2e-16 | 38.39 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3BLR6 | 2.7e-11 | 49.49 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. mak... | [more] |
Match Name | E-value | Identity | Description | |