MELO3C004564 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACACGGCCTCATAGCTTCACTCAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATCCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTAAGACTTGTCTCTTCCCTCCATTTTCAATCCCATTCATCTTAGAATCATACAATCATAGAATCATCAGTTACTGAAAGAAATTCAGTTCAATTCTTAAACGTGGAATAGATTTTGACTACAGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCTTAAGTTTCTTCTTGCATCTGGGTCTTGTGAATGCTGATGATTCTCCATTATTGTATGTGCTCGAGTAATGTTGCCAAAGAAGCATTCCAAATATCCTTTTGTTTGTTCACACTTCATAGAATTTTGTTTCTTAAAATAATGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTAGGATGATCATAGTTTGGGTCTAGTTCAATGCATTATGTCTTGCGGAACTCTAGTACGATTGAGGTAATCGGCCTGATGTTTGCCTGTACTGCTAGAATTTTCATGACCTTTGAATTGTGATTAGAGTCATATGGATGAAAAGGATGGAATACATCACTTTGATTGGTGTATGAAGGCAACAAGCTGAATCATACAAGCAACTTTAGTATTTGAACGAGAATTATTATAACTGATCATACATACGAAGTAGCCATAGTTGATTACACAATTTTAGCATTAGTCTAGTTTTTCAACAACTTAGCTGTGGTAGATTACTTTACGGTGGGTGCAAATGTTTGGGCTATTTGGCCGAAAAGAATTCAAAGGAATGGGATTGTTGAACATTTACGTTTTCTCCACCTGCAATAGATTTTTGAACCTTTTTTTTTTTTTTTTGTTATTTGAGCTATTGTAGTTTTTATTCAATCGGTGTTCGAGTTAAGAGCAGGGAGAGTTCCTTTTTTGTGTGTGGGTGTGGGCATTTAATTGGGAGGTTCTCTTCATCCCTTCCAATGTAAAGTTCTCCTTTGTCCTTTGGACAAATACCTTCTTCCTTGAATGTTGTCACATCTCATGGTGACATAAAACTACCTGAAAAGAGTAATCTATTTGATATCTTACGTTTATTGTAAAAAAAAAACATTACCAATTTCCAATGGGAAGACCTAGAAGTTGGTAGCATAACTGTTTATTACTCCACTTGCACCTGCACCCTCAAATGGTATGCTCGTTTGGTTGACTATGAGGATAACGACTCTTTTGTTGTTGTTCATTCTTTCTGGTTCACTGGGAAGTTTTGGGGATTGCTATTTTGTTTTGTGGTCTTGGGTAGCTCTTCCAAAAATGGAGTTGTATACTTCAGATGCTACTACGTTCAAAATTCAGAAACCAGGCTAAATCTATCTAGACTGATGCTATATTGATTATCTTTGTGTGAGGCTTGGAGAGTGAAAATAATAGGAATTTTCACAAAAGTCAAGGTAATCAAATTTTTGGCAGTCTATCTTGGCTCGTAAACTAAAGTTAGATGTCCAGTAGCCTCTATCTTGGCTCGTCAACTAAAGTTAGATGTCCAGTAGCCTTTCTCCTCCCTTATGTTTTCTTTATAGTATTTGTAGTACAGAGCTTATTTCGAAAAAAGTTGCTATTTTTGTCTTCCTCATAACAAACACTGATTAAAACTTCTGTACTTGACAACGAGAAGAGTAAGAGTGTGAAAGTCCATGCTAAAGAAAAACATCTTGGGGGCGTTTGTGGCACTATTTTAGCATCGTCAAGCCTAGGTTTAATGTGTTTAGGGGTTTAGGTTGATGGGTAGGGAAGTTGTTGGGGTGCAGGTTTTGAAACATAGAATTAAATCAGTGTGAACCGTGAGGGGGCTAGAATAGTGGGTTATTGTTCAAACTCGGTTGTTCCTCTGATAAAATTCAGTTTTGAAAACTCCTCATTCTAAACATCGTTTTGGCTTGGGTAGCTAAACCCATGTCCCAAATGCTTCTTTACAGCTGTAGCGTTATATTTTCTTTGCCCTTTGGTCACAAAATGACTTCTGATTACTAACATTAATTTTTGTTAATTTCTTTCATGGGAGAAAGTTATGCATGCAATTCTGTAGTTCATCATTTCAAGTAGCTTCATGCAAGACAAAAGCCCTCTTTGATGCTGTTTTATCTTTCCTGCAGGTATTTCAATGCCTTTATGACAGGCTTTGCTATGCAGGAACTTGTTCTTTGTAGTTTTCTTTTTATTGACAATTGGGGTCTCTTCTTACTTCTAGTTCTTTACAATCTACAAGAATGTAAACCTAAATTATTGCCTCTGGTTTTCTTTTTGCTCCTAAATTGGATGAGGTTTAAAGTTAAATTTTCATCTTGTAATGAATCCAAGTGTCATGATTGTTGGATTTATTACCCTTGAAAAAGATGATGTAACTATGCTTTGAAGAACATCTTGTTGCAAATAGAATGGTTATGGATTCTTCCTCTAGGTTTCTTTTGAT ACACGGCCTCATAGCTTCACTCAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATCCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGTTATGCATGCAATTCTGTAGTTCATCATTTCAAGTAGCTTCATGCAAGACAAAAGCCCTCTTTGATGCTGTTTTATCTTTCCTGCAGGTATTTCAATGCCTTTATGACAGGCTTTGCTATGCAGGAACTTGTTCTTTGTAGTTTTCTTTTTATTGACAATTGGGGTCTCTTCTTACTTCTAGTTCTTTACAATCTACAAGAATGTAAACCTAAATTATTGCCTCTGGTTTTCTTTTTGCTCCTAAATTGGATGAGGTTTAAAGTTAAATTTTCATCTTGTAATGAATCCAAGTGTCATGATTGTTGGATTTATTACCCTTGAAAAAGATGATGTAACTATGCTTTGAAGAACATCTTGTTGCAAATAGAATGGTTATGGATTCTTCCTCTAGGTTTCTTTTGAT ATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATCCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGTTATGCATGCAATTCTGTAG MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL Homology
BLAST of MELO3C004564 vs. NCBI nr
Match: XP_008458447.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo]) HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of MELO3C004564 vs. NCBI nr
Match: KAA0061549.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 9.6e-38 Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0
BLAST of MELO3C004564 vs. NCBI nr
Match: XP_008458440.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]) HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of MELO3C004564 vs. NCBI nr
Match: XP_004139345.1 (uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical protein Csa_019508 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of MELO3C004564 vs. NCBI nr
Match: XP_038889658.1 (uncharacterized protein LOC120079520 [Benincasa hispida]) HSP 1 Score: 145.6 bits (366), Expect = 2.3e-31 Identity = 84/93 (90.32%), Postives = 85/93 (91.40%), Query Frame = 0
BLAST of MELO3C004564 vs. ExPASy TrEMBL
Match: A0A1S3C7Z3 (uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of MELO3C004564 vs. ExPASy TrEMBL
Match: A0A5A7V7B3 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00330 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.6e-38 Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0
BLAST of MELO3C004564 vs. ExPASy TrEMBL
Match: A0A1S3C7U8 (uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of MELO3C004564 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of MELO3C004564 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 9.4e-31 Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 0
BLAST of MELO3C004564 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-14 Identity = 47/93 (50.54%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of MELO3C004564 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-14 Identity = 47/93 (50.54%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of MELO3C004564 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12 Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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