MELO3C004518 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004518
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Dynein light chain
Location	chr05: 27948539 .. 27950236 (+)
RNA-Seq Expression	MELO3C004518
Synteny	MELO3C004518

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTCTCTTAGAGATCATAATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAAGGTATTTATATATTTATCAGCTATACTGTTCACATTGACAAGTTTTGTTTAGTGGTTAGTTTTTCGTACAACTTCTCTCTTTCAACGTATCATTGTTTTTTCTTTTCGATCTTAGTTGTTATGAAATCGACAAATAAAAGAACGATAAAACACAATATAAGAAACAATGTGTTAGTTATGTCTACAAAATGGATTGTAGAGAGAGTTCAGTGGGATTAGAGGGTTTACTGTATGTATGCAGTGAATCCCTTTAAACTCTAATGTCAAATTTACATATATTGATGGGATTTGATCATTTTAAAGTAAAACTAGTTTTTTGGCCTTTTTGGGCATTGGGAATTTCATATTGGATTTGGTCTTTTTGTGAGGAAACGTTGAAAGAAAAGGGCAGGCAGGAGCTCCTTTTAATTTGTTGCTTTCTTGATTTCCTTCTTTTGGTCATACTCAGAAAGAAAATCTAACAAAGTGAAACTGTCTTTCGTTCGAGTACGGAGATTCAAACCTTCGACTTTAAGAAAGAAATAATAAATGACAATTACTGTTTGAGTTAGGTTCACGTTTGCTCTCTAAACTCTATTTGTTGTTCACTTCCATCACTAAATCTGTGTATTAATTGTATAATCAGAAACTAAGTCTTTTGAGAGAGAATTCAAGTGGGCATTTGGTCAAAGGATCCGACAGCCCATGTGTGTTAGATCAGTGATTAGCACATATTTTAAAGCTAATAATCTCATATATTTTCATTGAAATTGAAGCTCTTTTTTCTTATCCATGTGCATTTCTTGATACTTTACTCTTCCTAATTTCTCTTGCAATCATTTCGAAAGAATCTCACTCGTTACTAAATTATTGTAAACTGAGATTGGTTACGAGTCTTGAATCAAGAAACGGTAACAAGAGTGGTATTAAGTGACAAAGTTCAAAGGTGTTTTTCTTTCATAATTTAGCTAACTCAAAACACCATAAAATTAGATGATAAGAATAACTTTTAGAACAAATATTTGGTTTGACACACTACATTGATTCATACTGATTAAATTGGGGATTAATGGCAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGAGTTTTTGGTTCACAGAAAATGATGAATCTATGTAAAGCCATTTTA

mRNA sequence

ACATTCTCTTAGAGATCATAATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGAGTTTTTGGTTCACAGAAAATGATGAATCTATGTAAAGCCATTTTA

Coding sequence (CDS)

ATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGA

Protein sequence

MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSGGGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKAIE

Homology

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BLAST of MELO3C004518 vs. NCBI nr
Match: XP_008457739.1 (PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 6.9e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKAIE
Sbjct: 181 LLFRTKIQKAIE 192

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BLAST of MELO3C004518 vs. NCBI nr
Match: XP_031736570.1 (uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetical protein Csa_019270 [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 185/199 (92.96%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQH-- 60
           MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SSVDKTSIYKYNWLGRKSKKAT+QH  
Sbjct: 1   MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGG 60

Query: 61  -----SGGGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQ 120
                 GGGG GGI EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQ
Sbjct: 61  GGGGGGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQ 120

Query: 121 IQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYF 180
           IQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYF
Sbjct: 121 IQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYF 180

Query: 181 SMEKLYILLFRTKIQKAIE 193
           SMEKLYILLFRTKIQKAIE
Sbjct: 181 SMEKLYILLFRTKIQKAIE 198

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BLAST of MELO3C004518 vs. NCBI nr
Match: XP_038890919.1 (uncharacterized protein LOC120080348 [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 175/192 (91.15%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           M TLNKQMKGFKSFYKSRD GGRNV +REPVSTSS+DKTSIYKYNWLGRK+KKATDQH  
Sbjct: 1   MTTLNKQMKGFKSFYKSRD-GGRNVPTREPVSTSSMDKTSIYKYNWLGRKTKKATDQHGR 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           G      GEEIMGGRKVVVEGRKSVSHVETNLGSVA+FLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  G------GEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSKHMAYNIKKEFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKA E
Sbjct: 181 LLFRTKIQKATE 185

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BLAST of MELO3C004518 vs. NCBI nr
Match: KAG7030397.1 (hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.5 bits (794), Expect = 1.0e-80
Identity = 160/192 (83.33%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRDG   NV +R PVS SSVDKTS+YKYNWL  KSKKA+DQ+ G
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNPVSMSSVDKTSVYKYNWLNGKSKKASDQNGG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           GGG G       GGR VVVEGRKSVS VETNL SVA+FLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  GGGCG------CGGRTVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSK+MAYNIKKEFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKA E
Sbjct: 181 LLFRTKIQKANE 186

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BLAST of MELO3C004518 vs. NCBI nr
Match: XP_022946213.1 (uncharacterized protein LOC111450366 [Cucurbita moschata])

HSP 1 Score: 305.1 bits (780), Expect = 4.4e-79
Identity = 158/192 (82.29%), Postives = 169/192 (88.02%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRDG   NV +R  VS SSVDKTS+YKYNWL  KSKK +DQ+ G
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNLVSMSSVDKTSVYKYNWLNGKSKKTSDQNGG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           GGG         GGRKVVVEGRKSVS VETNL SVA+FLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  GGGC--------GGRKVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSK+MAYNIKKEFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKA E
Sbjct: 181 LLFRTKIQKANE 184

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BLAST of MELO3C004518 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DMPE MQ  A   A +   +LEKF+  K +A  IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMPEDMQQDAVDCATQ---ALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ +LLF++
Sbjct: 71  HETKHFIYFYLGQVAVLLFKS 88

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BLAST of MELO3C004518 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 101 VKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFG 160
           + V  +DMP+ MQ  A     ++++  E    + +A  IKKEFDK Y P WHCIVG SFG
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFG 67

Query: 161 SFVTHSTGCFLYFSMEKLYILLFR 185
           SFVTH T  F+YF++ K  +LLF+
Sbjct: 68  SFVTHETKNFIYFNINKHSVLLFK 89

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BLAST of MELO3C004518 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-13
Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM E MQ  +   A +   +LEK++  K +A +IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of MELO3C004518 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-13
Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM E MQ  +   A +   +LEK++  K +A +IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of MELO3C004518 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-13
Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVT 165
           +DM E MQ  +   A +   +LEK++  K +A +IKKEFDK Y P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 166 HSTGCFLYFSMEKLYILLFRT 186
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of MELO3C004518 vs. ExPASy TrEMBL
Match: A0A1S3C671 (uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.4e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKAIE
Sbjct: 181 LLFRTKIQKAIE 192

[Close]

BLAST of MELO3C004518 vs. ExPASy TrEMBL
Match: A0A0A0LKY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.6e-95
Identity = 185/195 (94.87%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SSVDKTSIYKYNWLGRKSKKAT+QH G
Sbjct: 1   MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGG 60

Query: 61  GGGAGGIG---EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120
           GGG GG+G   EEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF
Sbjct: 61  GGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120

Query: 121 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 180
           RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK
Sbjct: 121 RTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 180

Query: 181 LYILLFRTKIQKAIE 193
           LYILLFRTKIQKAIE
Sbjct: 181 LYILLFRTKIQKAIE 194

[Close]

BLAST of MELO3C004518 vs. ExPASy TrEMBL
Match: A0A6J1G363 (uncharacterized protein LOC111450366 OS=Cucurbita moschata OX=3662 GN=LOC111450366 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 158/192 (82.29%), Postives = 169/192 (88.02%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRDG   NV +R  VS SSVDKTS+YKYNWL  KSKK +DQ+ G
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNLVSMSSVDKTSVYKYNWLNGKSKKTSDQNGG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
           GGG         GGRKVVVEGRKSVS VETNL SVA+FLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  GGGC--------GGRKVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSK+MAYNIKKEFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKA E
Sbjct: 181 LLFRTKIQKANE 184

[Close]

BLAST of MELO3C004518 vs. ExPASy TrEMBL
Match: A0A6J1CN34 (uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013113 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 158/198 (79.80%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQ+KGFKSFYKSRD G R+ ++ +P   + +D+  +YKYNWLGRKSKKATDQH G
Sbjct: 1   MATLNKQIKGFKSFYKSRD-GARDTAAFDP---APLDRVPVYKYNWLGRKSKKATDQHGG 60

Query: 61  -----GGGAGGIGEEIMGGRK-VVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQI 120
                GGG GG G E MGGRK +VVEGRKSVSHVETNL SVA+FLQVKVLVSDMPE+MQ+
Sbjct: 61  RRGMEGGGGGGDGGEGMGGRKLLVVEGRKSVSHVETNLASVAAFLQVKVLVSDMPEMMQL 120

Query: 121 QAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFS 180
           QAFR+ARRSYDSLEKFSSKHMA++IKKEFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFS
Sbjct: 121 QAFRSARRSYDSLEKFSSKHMAHSIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFS 180

Query: 181 MEKLYILLFRTKIQKAIE 193
           MEKLYILLFRTKIQKA E
Sbjct: 181 MEKLYILLFRTKIQKATE 194

[Close]

BLAST of MELO3C004518 vs. ExPASy TrEMBL
Match: A0A6J1KGV2 (uncharacterized protein LOC111493764 OS=Cucurbita maxima OX=3661 GN=LOC111493764 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 153/192 (79.69%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRD    NV +R  +S SSVDKTS+YKYNWL  KSKK +DQ+  
Sbjct: 1   MASLNKQMKGFKSFYKSRDEAHHNVPARNSISMSSVDKTSVYKYNWLNGKSKKDSDQN-- 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120
                  GE   GGRKVVVEGRKSVS VETNL S+A+FLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  ------CGEVECGGRKVVVEGRKSVSQVETNLASLATFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180
           RRSYDSLEKFSSK+MAYNIKKEFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 180

Query: 181 LLFRTKIQKAIE 193
           LLFRTKIQKA E
Sbjct: 181 LLFRTKIQKANE 184

[Close]

BLAST of MELO3C004518 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 164.9 bits (416), Expect = 6.6e-41
Identity = 80/115 (69.57%), Postives = 94/115 (81.74%), Query Frame = 0


Query: 80  EGRKSVSHVE----TNLGSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHM 139
           EGRKSVSHVE      + + A  L V++L +DMP  MQ  AFR AR + DSLEKFSSKHM
Sbjct: 92  EGRKSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHM 151

Query: 140 AYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKA 191
           A+N+KKEFDK YGPAWHCIVGSSFGSFVTHSTGCF+YFSM+KLY+LLF+TK++ A
Sbjct: 152 AFNLKKEFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLLFKTKVRPA 206

[Close]

BLAST of MELO3C004518 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 98.6 bits (244), Expect = 5.8e-21
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 101 VKVLVSDMPEIMQIQAFRTARRSYDSLE-KFSSKHMAYNIKKEFDKVYGPAWHCIVGSSF 160
           V+V  SDMP   Q +AF  +R   ++   K  +K +A+ +KK+FD  YGPAWHCIVG+SF
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95

Query: 161 GSFVTHSTGCFLYFSMEKLYILLFRTKIQ 189
           GS+VTHSTG FLYF ++K+Y+LLF+T ++
Sbjct: 96  GSYVTHSTGGFLYFQIDKVYVLLFKTAVE 124

[Close]

BLAST of MELO3C004518 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 99  LQVKVLV--SDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVG 158
           L+ K +V  SDMP  MQ+QA   A ++ D  + F  K +A +IKKEFD+ YG  W C+VG
Sbjct: 2   LEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVG 61

Query: 159 SSFGSFVTHSTGCFLYFSMEKLYILLFR 185
           S+FG F THS G F+YF +E L  L+F+
Sbjct: 62  SNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of MELO3C004518 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 81.6 bits (200), Expect = 7.3e-16
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 100 QVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSF 159
           + KV  +DMP  MQ+QA + A +S D  + F S  +A +IKKEFD+ YG  W C+VG++F
Sbjct: 5   KAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNF 64

Query: 160 GSFVTHSTGCFLYFSMEKLYILLFR 185
           G F THS G F+YF +  L  L+F+
Sbjct: 65  GCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]

BLAST of MELO3C004518 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 106 SDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTH 165
           +DM + M+  A   A ++ D  +      +A  IKKEFD+ YG  W CIVG+ FGSFVTH
Sbjct: 11  TDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHFGSFVTH 70

Query: 166 STGCFLYFSMEKLYILLFRTKI 188
            +GCF++FS+  L ILLF+  +
Sbjct: 71  CSGCFIHFSVGSLTILLFKGSV 92

The following BLAST results are available for this feature:

BLAST of MELO3C004518 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457739.1	6.9e-101	100.00	PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo]	[more]
XP_031736570.1	1.4e-93	92.96	uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetica...	[more]
XP_038890919.1	1.0e-88	91.15	uncharacterized protein LOC120080348 [Benincasa hispida]	[more]
KAG7030397.1	1.0e-80	83.33	hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022946213.1	4.4e-79	82.29	uncharacterized protein LOC111450366 [Cucurbita moschata]	[more]

BLAST of MELO3C004518 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	1.1e-13	51.85	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q86A88	1.5e-13	47.62	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
P61285	9.7e-13	49.38	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	9.7e-13	49.38	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]
P61273	9.7e-13	49.38	Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ...	[more]

BLAST of MELO3C004518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C671	3.4e-101	100.00	uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=...	[more]
A0A0A0LKY0	3.6e-95	94.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1	[more]
A0A6J1G363	2.1e-79	82.29	uncharacterized protein LOC111450366 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1CN34	2.0e-77	79.80	uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1KGV2	2.9e-76	79.69	uncharacterized protein LOC111493764 OS=Cucurbita maxima OX=3661 GN=LOC111493764...	[more]

BLAST of MELO3C004518 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	6.6e-41	69.57	Dynein light chain type 1 family protein	[more]
AT1G23220.1	5.8e-21	52.81	Dynein light chain type 1 family protein	[more]
AT1G52240.2	1.9e-16	48.86	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	7.3e-16	47.06	Dynein light chain type 1 family protein	[more]
AT4G27360.1	1.8e-14	45.12	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 96..185 e-value: 2.1E-38 score: 143.6
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 101..185 e-value: 1.7E-30 score: 105.2
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 69..191
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 101..185 e-value: 2.1E-31 score: 110.1
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 98..185
None	No IPR available	PANTHER	PTHR11886:SF37	DYNEIN LIGHT CHAIN-LIKE PROTEIN	coord: 69..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004518.1	MELO3C004518.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex