MELO3C004496 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004496
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	chr05: 27786964 .. 27788833 (-)
RNA-Seq Expression	MELO3C004496
Synteny	MELO3C004496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCACTTACAAATCTCCTAAATCTCTTTCTTCCATCTTCTTCTTCCTTTCACTCACAAATTTCCCTCTTCAATAATGCTTCTAAGAAGTCCATCAACTCTAATTCTCAATCCATGGAAACCCCATTTCAAAGAATCCTCCACGGAGACTGTGATCCTCCACCAATTTCCTAAATCACGGCTCCTCACACTCTCTGCTTCTTCGAAATTGTTGCCGGTGCCACACATGATTGGTCCGGGCATTAAGATGAAGATGATGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCTGATTGCGGTGCTGAAATGGTCGGTGGTTTTGTTGATGGTAAATTCAACCGTGATAGTTGCAATGGCAATGGCAATGGCAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTACCATTATATGAGAATTGAAATTACTATCTTCTTTAATTTGATTCTAACTTTTTAACTTTGACATTTGGTTCTGATCATTCATTTTATTCTTCTCTGTTAAATGGAGAATGGAAATCTTGTTGTCTCAAATAGAAGTTCTTGCAAAATCTTAGTTCTGATCCTTTACCACTGTCCATTCCTTTTCTAGGTGTTTGTATGGATCTTGATCTTGAGTTCCTGAACTGACGGGCCGGGTGTATGAAATACTAGAAGATGAACAAAGTGGATTTTAGGAAAAAAATACCCAACAAACTAGAATTTACCTGAATAGGTCCATTTTGGACCTTGAACTTTTAGAAGAAAGTATTTGATTCTTGAAACTTTTCAATTTTTAACAATATATAGTCTTTTGAACCAACAACTCTCAACAAATCTTTCTAATCTTTTCACAAATTGGGACTAAACCATTACAAAATTGGTTTTTCTATGAAGTTGCTACAAGAATGTAAAATGTCTTAAGGGGGAAAAGTTTGAACTATTGTTTTACTATTGAAAAAACTTGTGTGGTTAGTCGTAGAGTTTCATTCTCAAGCAATAATTTGTTGTTTTTATCTGCTGCTAATAAACAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGGTACGGAGAATGAGATATCCTGCTTTTTCATTAACTATATAAATCCAACACATAGCTTAATAATGTGAATAAAGAACACCAATTATCGAGCTTTTGTAGGAATCTGAAATTTTGATATACAAGGGAAAGAAAGAGAGCTCTTTCTCTCCCACACACATGCTAGCTAATTTTTGCTATAATTGGGACATTGGTAATTGATATATTTGTGGGGTTGTTTTGTTTGTTTAACTGGTGCAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAATAATTCATTCTTAGTTTCTCTCTTCAGTCATACTTTTTTTCTTAGGTAGTTTTTCTTTAACTATGAAAGCATATATAATGATTTTTTTTCTTTGCCAATTTGATTCTCAATTTGTTTATGCTATGCAATAAACTAAGAATCCCAATTTTGCAATGAATCTTAATCTTACTCTAAAGATTAGAAATATGATATGTGTACATGTGGCAATT

mRNA sequence

AACCACTTACAAATCTCCTAAATCTCTTTCTTCCATCTTCTTCTTCCTTTCACTCACAAATTTCCCTCTTCAATAATGCTTCTAAGAAGTCCATCAACTCTAATTCTCAATCCATGGAAACCCCATTTCAAAGAATCCTCCACGGAGACTGTGATCCTCCACCAATTTCCTAAATCACGGCTCCTCACACTCTCTGCTTCTTCGAAATTGTTGCCGGTGCCACACATGATTGGTCCGGGCATTAAGATGAAGATGATGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCTGATTGCGGTGCTGAAATGGTCGGTGGTTTTGTTGATGGTAAATTCAACCGTGATAGTTGCAATGGCAATGGCAATGGCAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAATAATTCATTCTTAGTTTCTCTCTTCAGTCATACTTTTTTTCTTAGGTAGTTTTTCTTTAACTATGAAAGCATATATAATGATTTTTTTTCTTTGCCAATTTGATTCTCAATTTGTTTATGCTATGCAATAAACTAAGAATCCCAATTTTGCAATGAATCTTAATCTTACTCTAAAGATTAGAAATATGATATGTGTACATGTGGCAATT

Coding sequence (CDS)

ATGCTTCTAAGAAGTCCATCAACTCTAATTCTCAATCCATGGAAACCCCATTTCAAAGAATCCTCCACGGAGACTGTGATCCTCCACCAATTTCCTAAATCACGGCTCCTCACACTCTCTGCTTCTTCGAAATTGTTGCCGGTGCCACACATGATTGGTCCGGGCATTAAGATGAAGATGATGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCTGATTGCGGTGCTGAAATGGTCGGTGGTTTTGTTGATGGTAAATTCAACCGTGATAGTTGCAATGGCAATGGCAATGGCAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

Protein sequence

MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN

Homology

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BLAST of MELO3C004496 vs. NCBI nr
Match: TYJ97822.1 (putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 477.2 bits (1227), Expect = 8.2e-131
Identity = 240/247 (97.17%), Postives = 240/247 (97.17%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESS ETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNG--NGNGGDGGCFGSWDGDHTEE 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFN   CNGNG  N NGGDGGCFGSWDGDHTEE
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFN---CNGNGNDNDNGGDGGCFGSWDGDHTEE 120

Query: 121 DMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA 180
           DMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA
Sbjct: 121 DMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA 180

Query: 181 ELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPF 240
           ELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPF
Sbjct: 181 ELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPF 240

Query: 241 SSQSSSN 246
           SSQSSSN
Sbjct: 241 SSQSSSN 244

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BLAST of MELO3C004496 vs. NCBI nr
Match: KAA0061616.1 (EIN3-binding F-box protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM 120

Query: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180
           AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL
Sbjct: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180

Query: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVL 225
           IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE L
Sbjct: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKECL 224

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BLAST of MELO3C004496 vs. NCBI nr
Match: XP_011648683.2 (uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical protein Csa_019377 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 7.7e-105
Identity = 207/257 (80.54%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60

Query: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNG 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK NRD CNGN NGN 
Sbjct: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGN- 120

Query: 121 GDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180
             GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR
Sbjct: 121 --GGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180

Query: 181 AMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 240
           AMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KE
Sbjct: 181 AMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKE 240

[Close]

BLAST of MELO3C004496 vs. NCBI nr
Match: KAG6599396.1 (hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030381.1 hypothetical protein SDJN02_08728 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.7 bits (740), Expect = 2.4e-74
Identity = 161/268 (60.07%), Postives = 188/268 (70.15%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMI-GPGIKMK 60
           MLLRS ST ILNPWKPH KE+S E  I+HQ PKSR LTL ASSKLLP P MI GP I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNG 120
                                  GLCCGV +VGESSDCG  MVG  VDG    D C G+G
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120

Query: 121 NG-NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 180
            G +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAE
Sbjct: 121 GGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAE 180

Query: 181 EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 240
           EYCGR++ A  N+G+VIS+YA+LIW NH DASRAESYHLQA KTSPD+SFV A+YARFLW
Sbjct: 181 EYCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLW 240

Query: 241 EVDKEVLDG----EALMDIFGGNPFSSQ 242
           +  +EV D     E   D F G P+SS+
Sbjct: 241 DAGEEVEDDDDNEEDGFDSF-GEPYSSR 266

[Close]

BLAST of MELO3C004496 vs. NCBI nr
Match: XP_023545630.1 (uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 7.1e-74
Identity = 162/270 (60.00%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMI-GPGIKMK 60
           MLLRS ST ILNPWKPH KE+S E  I HQ PKSR LTL ASSKLLP P MI GP I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIAHQIPKSRPLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNG 120
                                  GL CGV +VGESSDCG  MVG  VDG   RD C G+G
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLFCGVAEVGESSDCGGGMVGVSVDGGIGRDGCGGDG 120

Query: 121 NG-NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 180
            G +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAE
Sbjct: 121 GGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAE 180

Query: 181 EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 240
           EYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA KTSPD+SFV A+YARFLW
Sbjct: 181 EYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLW 240

Query: 241 EVDKEVLDG------EALMDIFGGNPFSSQ 242
           +  +EV D       E   D F G P+SS+
Sbjct: 241 DAGEEVEDDDDDDDKEDGFDSF-GEPYSSR 268

[Close]

BLAST of MELO3C004496 vs. ExPASy TrEMBL
Match: A0A5D3BDH3 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00320 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.0e-131
Identity = 240/247 (97.17%), Postives = 240/247 (97.17%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESS ETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNG--NGNGGDGGCFGSWDGDHTEE 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFN   CNGNG  N NGGDGGCFGSWDGDHTEE
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFN---CNGNGNDNDNGGDGGCFGSWDGDHTEE 120

Query: 121 DMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA 180
           DMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA
Sbjct: 121 DMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA 180

Query: 181 ELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPF 240
           ELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPF
Sbjct: 181 ELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPF 240

Query: 241 SSQSSSN 246
           SSQSSSN
Sbjct: 241 SSQSSSN 244

[Close]

BLAST of MELO3C004496 vs. ExPASy TrEMBL
Match: A0A5A7V554 (EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001810 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM 120

Query: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180
           AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL
Sbjct: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180

Query: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVL 225
           IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE L
Sbjct: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKECL 224

[Close]

BLAST of MELO3C004496 vs. ExPASy TrEMBL
Match: A0A0A0LL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.8e-105
Identity = 207/257 (80.54%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60

Query: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNG 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK NRD CNGN NGN 
Sbjct: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGN- 120

Query: 121 GDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180
             GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR
Sbjct: 121 --GGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180

Query: 181 AMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 240
           AMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KE
Sbjct: 181 AMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKE 240

[Close]

BLAST of MELO3C004496 vs. ExPASy TrEMBL
Match: A0A6J1KGA4 (uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.6e-71
Identity = 155/266 (58.27%), Postives = 183/266 (68.80%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMI-GPGIKMK 60
           MLLRS ST ILNPWKPH KESS E  I++Q  KSR LTL ASSKLLP P +I GP I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNG 120
                                  GLCCG+  V  SSDCG  +VG  VDG   RD C G+G
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLCCGIAKVRGSSDCGGGVVGVSVDGGIGRDGCGGDG 120

Query: 121 NG-NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 180
            G +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAE
Sbjct: 121 GGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAE 180

Query: 181 EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 240
           EYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA KTSPD+SFV A+YA+FLW
Sbjct: 181 EYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQFLW 240

Query: 241 EVDKEVLDGEALMDIFG--GNPFSSQ 242
           +  +EV D     D F   G P SS+
Sbjct: 241 DAGEEVKDDNDEEDGFDSFGKPCSSR 265

[Close]

BLAST of MELO3C004496 vs. ExPASy TrEMBL
Match: A0A6J1G2S9 (uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC111450271 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.8e-68
Identity = 151/268 (56.34%), Postives = 178/268 (66.42%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMI-GPGIKMK 60
           MLLRS ST ILNPWKPH KE+S E  I+HQ PKSR LTL ASSKLLP P MI GP I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNG 120
                                  GLCCGV +VGESSDCG +                  G
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGD-----------------GG 120

Query: 121 NGNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEE 180
             +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAEE
Sbjct: 121 GSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWE 240
           YCGR++ A  N+G+VIS+YA+LIW NH DASRAESYHLQA KTSPD+SFV A+YARFLW+
Sbjct: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240

Query: 241 VDKEVLDG-----EALMDIFGGNPFSSQ 242
             +EV D      E   D F G P+SS+
Sbjct: 241 AGEEVKDDDDDEEEDGFDSF-GEPYSSR 249

[Close]

BLAST of MELO3C004496 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 98/267 (36.70%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 1   MLLRSPSTLILNP--WKPHFKESSTETV-ILHQFPKSRLLTLSASSKLL----------- 60
           MLLRS ST +LN        ++S  ETV  +HQ  + R +TLSASS              
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  -----------------------PVPHMIGPGIKMKMM--GLCCGV------DDVGESSD 120
                                  PV   +  G  M+ +  G+  G+      D +  + D
Sbjct: 61  DSSRRMKRTASDSDLRHLTSTKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWALD 120

Query: 121 CGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKD 180
              E+ GG   G F     +G G G  G     G  DG    +D  ++H+++MI+ NP +
Sbjct: 121 EDTEVAGGGGGGMF-----HGGGKGRSG-----GRSDGGDGGDDNTDVHYRKMIEANPGN 180

Query: 181 SLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYH 223
            + LSNYA+FLKEVR D +KAEEYCGRA+L   N+G+V++MYAEL+W  H D+SRAE+Y 
Sbjct: 181 GIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENYF 240

[Close]

BLAST of MELO3C004496 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-30
Identity = 79/168 (47.02%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 66  GVDDVGESSDCGAEMV--GGFVDGKFNRDSCNGNG--NGNGGDGGCFGSWDGDHTEEDMA 125
           G  D   S+D    +V  GG   G    + CNG G   G+G DGG           ED  
Sbjct: 115 GQGDKASSNDRLETLVSGGGGGMGGSGGNICNGGGGVGGSGVDGG---------RSEDAT 174

Query: 126 EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI 185
           + +++ MI +NP +SLL  NYA+FLKEV+GD+ KAEEYC RA+L   N+G+V+S+YA+LI
Sbjct: 175 DTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLI 234

Query: 186 WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEAL 230
             NH D  RA SY+ QA K SP++ +V A+YARFLW+VD++  D EAL
Sbjct: 235 LHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEED-EAL 272

[Close]

BLAST of MELO3C004496 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.3e-29
Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 77  GAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDS 136
           G+ +  G  +G F     +G G G GG G   GS DG          +++ MI+  P D+
Sbjct: 79  GSRLPQGGSNGGFGGRGGDGAGGGGGGGG---GSVDG----------YYEEMIQRYPGDT 138

Query: 137 LLLSNYAQFLKEVRGDLIKAEEYCGRAMLAR-GNNGSVISMYAELIWSNHMDASRAESYH 196
           LLLSNYA+FLKEV+GD  KAEEYC RAML+  G +G ++SMY +LIW NH D  RA+SY+
Sbjct: 139 LLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYY 198

Query: 197 LQATKTSPDNSFVFAAYARFLWEVDKEVLDGEA 229
            QA ++SPD+  V A+YARFLW+ ++EV + E+
Sbjct: 199 DQAVQSSPDDCNVLASYARFLWDAEEEVEEEES 218

[Close]

BLAST of MELO3C004496 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 68  DDVGESSDCGAEMVGGFVDGKFN-RDSC---NGNGNGNGGDGGCFGSWDGDHTEEDMAEM 127
           D+ GE     A+  G  + G     + C    G G G+G  GG      G + ++     
Sbjct: 93  DEAGEEEIRFADGWGSMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGD 152

Query: 128 HFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWS 187
           +++ M+++NP +SLLL NY +FL EV  D   AEEY GRA+L    +G  +SMY  LIW 
Sbjct: 153 YYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWE 212

Query: 188 NHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGE 228
              D  RA+ Y  QA   SP++  V  +YARF+WE + +  D E
Sbjct: 213 TKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDE 256

[Close]

BLAST of MELO3C004496 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 9.4e-16
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 124 HFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWS 183
           +++ M++  P   LLL NYA+FL E +GDL  AEEY  +  +   ++G  ++ Y  L+  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 184 NHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 223
            H D ++A SY  +A + SPD+S V AAYA FLWE++ +
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINAD 221

The following BLAST results are available for this feature:

BLAST of MELO3C004496 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97822.1	8.2e-131	97.17	putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. ma...	[more]
KAA0061616.1	4.4e-124	99.55	EIN3-binding F-box protein 1 [Cucumis melo var. makuwa]	[more]
XP_011648683.2	7.7e-105	80.54	uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical ...	[more]
KAG6599396.1	2.4e-74	60.07	hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545630.1	7.1e-74	60.00	uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C004496 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C004496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDH3	4.0e-131	97.17	Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ...	[more]
A0A5A7V554	2.1e-124	99.55	EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0LL02	3.8e-105	80.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1	[more]
A0A6J1KGA4	4.6e-71	58.27	uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G2S9	2.8e-68	56.34	uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]

BLAST of MELO3C004496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	1.4e-32	36.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	1.3e-30	47.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	4.3e-29	47.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	1.1e-21	36.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	9.4e-16	40.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 110..229 e-value: 1.3E-9 score: 39.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 119..220
None	No IPR available	PANTHER	PTHR26312:SF73	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..45 coord: 81..222
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..45 coord: 81..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004496.1	MELO3C004496.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding