MELO3C004444 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004444
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Serine/threonine-protein phosphatase 7 long form-like protein
Location	chr05: 27296990 .. 27297319 (-)
RNA-Seq Expression	MELO3C004444
Synteny	MELO3C004444

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGACGGCCTCCTCCGCCCCGTCTATGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGTCCTTACCACCGCAACTGCACCTGCGCTCTCCACAAGTCTCGCCGTCAACCTCCTCATTGTTCCCATTCCAAATCCAAATCCATCTCCTATCCCATTCGTCGATCCTGGAGCGAAGGCTGCTTGTCTCTCGCCCTTGCCTCTGCTTCCTCTTCCCCTTCCACCTCCCCTGTCGTCGGTAAGACCTCTCAGCCTGGTGCTGCTTTGAGCGAGGACGATGACGACGACGCTCCTATTCTCTTTGCCAGGCCGAATTGA

mRNA sequence

ATGGCCGCCGACGGCCTCCTCCGCCCCGTCTATGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGTCCTTACCACCGCAACTGCACCTGCGCTCTCCACAAGTCTCGCCGTCAACCTCCTCATTGTTCCCATTCCAAATCCAAATCCATCTCCTATCCCATTCGTCGATCCTGGAGCGAAGGCTGCTTGTCTCTCGCCCTTGCCTCTGCTTCCTCTTCCCCTTCCACCTCCCCTGTCGTCGGTAAGACCTCTCAGCCTGGTGCTGCTTTGAGCGAGGACGATGACGACGACGCTCCTATTCTCTTTGCCAGGCCGAATTGA

Coding sequence (CDS)

ATGGCCGCCGACGGCCTCCTCCGCCCCGTCTATGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGTCCTTACCACCGCAACTGCACCTGCGCTCTCCACAAGTCTCGCCGTCAACCTCCTCATTGTTCCCATTCCAAATCCAAATCCATCTCCTATCCCATTCGTCGATCCTGGAGCGAAGGCTGCTTGTCTCTCGCCCTTGCCTCTGCTTCCTCTTCCCCTTCCACCTCCCCTGTCGTCGGTAAGACCTCTCAGCCTGGTGCTGCTTTGAGCGAGGACGATGACGACGACGCTCCTATTCTCTTTGCCAGGCCGAATTGA

Protein sequence

MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRSWSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN

Homology

[Close]

BLAST of MELO3C004444 vs. NCBI nr
Match: XP_016901708.1 (PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 2.1e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN 110
           WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN
Sbjct: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN 109

[Close]

BLAST of MELO3C004444 vs. NCBI nr
Match: XP_038889376.1 (uncharacterized protein LOC120079294 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 4.1e-50
Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCDSEIHRRPYHRNC CALHKSRRQPPHCSHSKSKSISYPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+L LASASSSPS+SPVVGKTSQPGAALS+DDDDD PILFAR
Sbjct: 61  WSEGCLTLVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILFAR 107

[Close]

BLAST of MELO3C004444 vs. NCBI nr
Match: XP_022999015.1 (uncharacterized protein LOC111493529 [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 5.2e-45
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNC CALHKSRRQ P CSHSKSKSI YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+LALASASSSPS+SPVVGKTSQPG ALS+DDDDDAP+  AR
Sbjct: 61  WSEGCLALALASASSSPSSSPVVGKTSQPGVALSDDDDDDAPLQLAR 107

[Close]

BLAST of MELO3C004444 vs. NCBI nr
Match: XP_023546835.1 (uncharacterized protein LOC111805826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.7 bits (483), Expect = 6.8e-45
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNC CALHKSRRQ P CSHSKSKSI YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+LALASASSSPS+SPV+GKTSQPG ALS+DDDDDAP+  AR
Sbjct: 61  WSEGCLALALASASSSPSSSPVIGKTSQPGVALSDDDDDDAPLQLAR 107

[Close]

BLAST of MELO3C004444 vs. NCBI nr
Match: XP_022938303.1 (uncharacterized protein LOC111444438 [Cucurbita moschata])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADG+LRPVYEACIAGCDSEIHRRPYHRNC CALH+SRRQ  HC HSK KS+SYPIRRS
Sbjct: 1   MAADGVLRPVYEACIAGCDSEIHRRPYHRNCGCALHESRRQLSHCYHSKYKSVSYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+LA AS SSSPS+SPVVGK+SQPGAALS+DDDDDAP+ F R
Sbjct: 61  WSEGCLTLAFASPSSSPSSSPVVGKSSQPGAALSDDDDDDAPVQFNR 107

[Close]

BLAST of MELO3C004444 vs. ExPASy TrEMBL
Match: A0A1S4E0F4 (uncharacterized protein LOC103499614 OS=Cucumis melo OX=3656 GN=LOC103499614 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN 110
           WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN
Sbjct: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN 109

[Close]

BLAST of MELO3C004444 vs. ExPASy TrEMBL
Match: A0A0A0LI78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009330 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-49
Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRP+YEACI GCDSEIHRRPYHRNC CALHKS RQPPHCSHSKSKSISYPIRRS
Sbjct: 1   MAADGLLRPIYEACI-GCDSEIHRRPYHRNCGCALHKSSRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFARPN 110
           WSEGCLSL LASASSSPS+SPVVGKTSQPGA LSEDDDDD+PILFARPN
Sbjct: 61  WSEGCLSLVLASASSSPSSSPVVGKTSQPGAPLSEDDDDDSPILFARPN 108

[Close]

BLAST of MELO3C004444 vs. ExPASy TrEMBL
Match: A0A6J1KE46 (uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNC CALHKSRRQ P CSHSKSKSI YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+LALASASSSPS+SPVVGKTSQPG ALS+DDDDDAP+  AR
Sbjct: 61  WSEGCLALALASASSSPSSSPVVGKTSQPGVALSDDDDDDAPLQLAR 107

[Close]

BLAST of MELO3C004444 vs. ExPASy TrEMBL
Match: A0A6J1FII0 (uncharacterized protein LOC111444438 OS=Cucurbita moschata OX=3662 GN=LOC111444438 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.2e-44
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADG+LRPVYEACIAGCDSEIHRRPYHRNC CALH+SRRQ  HC HSK KS+SYPIRRS
Sbjct: 1   MAADGVLRPVYEACIAGCDSEIHRRPYHRNCGCALHESRRQLSHCYHSKYKSVSYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+LA AS SSSPS+SPVVGK+SQPGAALS+DDDDDAP+ F R
Sbjct: 61  WSEGCLTLAFASPSSSPSSSPVVGKSSQPGAALSDDDDDDAPVQFNR 107

[Close]

BLAST of MELO3C004444 vs. ExPASy TrEMBL
Match: A0A6J1G546 (uncharacterized protein LOC111450804 OS=Cucurbita moschata OX=3662 GN=LOC111450804 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNC CALHKSRRQ P CSHSKSKSI YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILFAR 108
           WSEGCL+LALASASSSPS+SPV+GKTSQPG ALS DDDDDAP+  AR
Sbjct: 61  WSEGCLALALASASSSPSSSPVIGKTSQPGVALS-DDDDDAPLQLAR 106

[Close]

BLAST of MELO3C004444 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-18
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALH---------KSRRQPPHC-SHSKS 60
           MAADG+ R ++E CI+G DS I RRPYH+NC CALH         +++R+PP C  H  S
Sbjct: 1   MAADGIFRSIFEGCISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSS 60

Query: 61  KSISYPIRRSWSEG-CLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDA 102
           +SIS+PIRRSWSEG  +++ L S+SSS S    +  +S      S+   D+A
Sbjct: 61  ESISFPIRRSWSEGNIMAMNLFSSSSSSSNLQSLSSSSSLSNLASDLPVDNA 112

[Close]

BLAST of MELO3C004444 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-16
Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 4   DGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRR---QPPHCSHSKSKSISYPIRRS 63
           DG+ R ++E CI+ CDS I RRPYH+NC CALH+  R       C H +S+ + +PI+RS
Sbjct: 7   DGIFRNIFEGCISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVVMFPIQRS 66

Query: 64  WSEG-CLSLALASASSSPSTSPVVGKTS-QPGAALSED-DDDDAPI 104
           WSEG  L+L LAS+SSS +   +   +S    A+LS    D D+PI
Sbjct: 67  WSEGNSLALHLASSSSSSNLQSLSSSSSISTLASLSSTVSDIDSPI 112

The following BLAST results are available for this feature:

BLAST of MELO3C004444 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901708.1	2.1e-54	100.00	PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo]	[more]
XP_038889376.1	4.1e-50	94.39	uncharacterized protein LOC120079294 [Benincasa hispida]	[more]
XP_022999015.1	5.2e-45	87.85	uncharacterized protein LOC111493529 [Cucurbita maxima]	[more]
XP_023546835.1	6.8e-45	86.92	uncharacterized protein LOC111805826 [Cucurbita pepo subsp. pepo]	[more]
XP_022938303.1	1.3e-43	84.11	uncharacterized protein LOC111444438 [Cucurbita moschata]	[more]

BLAST of MELO3C004444 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C004444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0F4	1.0e-54	100.00	uncharacterized protein LOC103499614 OS=Cucumis melo OX=3656 GN=LOC103499614 PE=...	[more]
A0A0A0LI78	2.2e-49	92.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009330 PE=4 SV=1	[more]
A0A6J1KE46	2.5e-45	87.85	uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529...	[more]
A0A6J1FII0	6.2e-44	84.11	uncharacterized protein LOC111444438 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]
A0A6J1G546	1.4e-43	86.92	uncharacterized protein LOC111450804 OS=Cucurbita moschata OX=3662 GN=LOC1114508...	[more]

BLAST of MELO3C004444 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46490.1	5.8e-18	46.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35110.1	5.4e-16	46.23	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..87
None	No IPR available	PANTHER	PTHR35121:SF2	BNAC04G52100D PROTEIN	coord: 2..87
None	No IPR available	PANTHER	PTHR35121	HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATED	coord: 2..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004444.1	MELO3C004444.1	mRNA