MELO3C004151.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAACACCCAAAATAATTTAATAACCCCTCTCTCTTCAAATCTTCCAACACTCAAAACTTTTTCCTTTCTCTCTTTGCTGTTGCCCTAGCCATGGCTTCATCAGCCAACAACAAAAGACAAAAGCGCCCGAAGTCGACCTCGTGTTGCTTCTCGATCTTCGGTTTGTTCAAGTCTCGAGATGGCGGAAAGAGGTGGGATGATGCAATGACGATGGACGATACACGAAAGGTGTGGCCAAGTGATGGCGACAAAGGTCGACACTGGGTCGCTGAGCCTGGCATTGATAGAAAAGCTAAAGCTTATATCGAAAAGATTCATCACCAAATCCGCTCCTCCGAACCCCAATGACAACTTCACTCCAAACTTAATTTGGATTATTAGTTCTTTCTATCATTATACATACATATATCATTACCTTATATGTATATGTATATAGATATATATAGTTTATATATGCTTTTAAGTGTGTATTATCGTATA AAACACCCAAAATAATTTAATAACCCCTCTCTCTTCAAATCTTCCAACACTCAAAACTTTTTCCTTTCTCTCTTTGCTGTTGCCCTAGCCATGGCTTCATCAGCCAACAACAAAAGACAAAAGCGCCCGAAGTCGACCTCGTGTTGCTTCTCGATCTTCGGTTTGTTCAAGTCTCGAGATGGCGGAAAGAGGTGGGATGATGCAATGACGATGGACGATACACGAAAGGTGTGGCCAAGTGATGGCGACAAAGGTCGACACTGGGTCGCTGAGCCTGGCATTGATAGAAAAGCTAAAGCTTATATCGAAAAGATTCATCACCAAATCCGCTCCTCCGAACCCCAATGACAACTTCACTCCAAACTTAATTTGGATTATTAGTTCTTTCTATCATTATACATACATATATCATTACCTTATATGTATATGTATATAGATATATATAGTTTATATATGCTTTTAAGTGTGTATTATCGTATA ATGGCTTCATCAGCCAACAACAAAAGACAAAAGCGCCCGAAGTCGACCTCGTGTTGCTTCTCGATCTTCGGTTTGTTCAAGTCTCGAGATGGCGGAAAGAGGTGGGATGATGCAATGACGATGGACGATACACGAAAGGTGTGGCCAAGTGATGGCGACAAAGGTCGACACTGGGTCGCTGAGCCTGGCATTGATAGAAAAGCTAAAGCTTATATCGAAAAGATTCATCACCAAATCCGCTCCTCCGAACCCCAATGA MASSANNKRQKRPKSTSCCFSIFGLFKSRDGGKRWDDAMTMDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHHQIRSSEPQ Homology
BLAST of MELO3C004151.jh1 vs. NCBI nr
Match: KAA0056089.1 (hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa] >TYJ96428.1 hypothetical protein E5676_scaffold546G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 183 bits (464), Expect = 2.50e-58 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. NCBI nr
Match: KAG6599163.1 (hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123 bits (308), Expect = 1.54e-34 Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. NCBI nr
Match: KAG6586063.1 (hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114 bits (286), Expect = 3.19e-31 Identity = 59/79 (74.68%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. NCBI nr
Match: XP_021898970.1 (uncharacterized protein LOC110815469 [Carica papaya]) HSP 1 Score: 84.7 bits (208), Expect = 3.11e-19 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. NCBI nr
Match: ESR41577.1 (hypothetical protein CICLE_v10013222mg [Citrus clementina]) HSP 1 Score: 75.9 bits (185), Expect = 9.00e-16 Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BDY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00610 PE=4 SV=1) HSP 1 Score: 183 bits (464), Expect = 1.21e-58 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LJ24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1) HSP 1 Score: 173 bits (439), Expect = 7.92e-55 Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. ExPASy TrEMBL
Match: V4SLM0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.36e-16 Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. ExPASy TrEMBL
Match: A0A2H5NTQ0 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073840 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.36e-16 Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. ExPASy TrEMBL
Match: A0A067E306 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040544mg PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.18e-16 Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 1.9e-08 Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of MELO3C004151.jh1 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08 Identity = 37/81 (45.68%), Postives = 45/81 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|