MELO3C004101.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAGGTGGGTTACATCTACAATAACAAAATAGTCGAGAAGGAGGTCTATGAAGCATGTTTGGCTCTTTGTGAAATGAAGAAAAGTTCGGAACCATTTGAGGAGCCCAATCAATTTCCAAGTTCAACTTCCATTTCTATGGTCGATGATCAACCTCCTGTGGTTAACGAACAACCTCCGATAGTTAATGAACATGCTCCTGTAGTCAATGAAGCTTTACTCAACAACAACAACAATAACAATGAAAATGTGGCAGCAGTCGTGGCTGATAGAGATTTGGGTAGACTTCCACCAATGGTAGTGATCCAAAACATAATTGGAGAGTGCAGTCCACCATTCGTGAAGCAATTGACGAAGACAGATGTGACAGACAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCGTAATTTGGTTCCAATGTTCAATGGTGATGAGATTCTGACGAATGGAATTAGTGTTACCGTTTATGATAGTGAAGGAAGAGAATACGACATGACATTCAGGCTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAAGAAGTTTTACCATGACAATGGTTTAACACGACCCGATGAATTTATTACTCTTTGGATGTTTCGACATGTCGTCAATCATAAGCTTTGCTTTGCTATTATGAGAGGAAACGTTGAAGGACATTGA ATGGTTAAGGTGGGTTACATCTACAATAACAAAATAGTCGAGAAGGAGGTCTATGAAGCATGTTTGGCTCTTTGTGAAATGAAGAAAAGTTCGGAACCATTTGAGGAGCCCAATCAATTTCCAAGTTCAACTTCCATTTCTATGGTCGATGATCAACCTCCTGTGGTTAACGAACAACCTCCGATAGTTAATGAACATGCTCCTGTAGTCAATGAAGCTTTACTCAACAACAACAACAATAACAATGAAAATGTGGCAGCAGTCGTGGCTGATAGAGATTTGGGTAGACTTCCACCAATGGTAGTGATCCAAAACATAATTGGAGAGTGCAGTCCACCATTCGTGAAGCAATTGACGAAGACAGATGTGACAGACAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCGTAATTTGGTTCCAATGTTCAATGGTGATGAGATTCTGACGAATGGAATTAGTGTTACCGTTTATGATAGTGAAGGAAGAGAATACGACATGACATTCAGGCTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAAGAAGTTTTACCATGACAATGGTTTAACACGACCCGATGAATTTATTACTCTTTGGATGTTTCGACATGTCGTCAATCATAAGCTTTGCTTTGCTATTATGAGAGGAAACGTTGAAGGACATTGA ATGGTTAAGGTGGGTTACATCTACAATAACAAAATAGTCGAGAAGGAGGTCTATGAAGCATGTTTGGCTCTTTGTGAAATGAAGAAAAGTTCGGAACCATTTGAGGAGCCCAATCAATTTCCAAGTTCAACTTCCATTTCTATGGTCGATGATCAACCTCCTGTGGTTAACGAACAACCTCCGATAGTTAATGAACATGCTCCTGTAGTCAATGAAGCTTTACTCAACAACAACAACAATAACAATGAAAATGTGGCAGCAGTCGTGGCTGATAGAGATTTGGGTAGACTTCCACCAATGGTAGTGATCCAAAACATAATTGGAGAGTGCAGTCCACCATTCGTGAAGCAATTGACGAAGACAGATGTGACAGACAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCGTAATTTGGTTCCAATGTTCAATGGTGATGAGATTCTGACGAATGGAATTAGTGTTACCGTTTATGATAGTGAAGGAAGAGAATACGACATGACATTCAGGCTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAAGAAGTTTTACCATGACAATGGTTTAACACGACCCGATGAATTTATTACTCTTTGGATGTTTCGACATGTCGTCAATCATAAGCTTTGCTTTGCTATTATGAGAGGAAACGTTGAAGGACATTGA MVKVGYIYNNKIVEKEVYEACLALCEMKKSSEPFEEPNQFPSSTSISMVDDQPPVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVVADRDLGRLPPMVVIQNIIGECSPPFVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRLWTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVEGH Homology
BLAST of MELO3C004101.jh1 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 459 bits (1180), Expect = 6.33e-163 Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus]) HSP 1 Score: 320 bits (820), Expect = 4.07e-108 Identity = 168/231 (72.73%), Postives = 183/231 (79.22%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus]) HSP 1 Score: 297 bits (761), Expect = 4.14e-99 Identity = 163/230 (70.87%), Postives = 177/230 (76.96%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188 bits (478), Expect = 2.40e-56 Identity = 110/225 (48.89%), Postives = 137/225 (60.89%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 168 bits (425), Expect = 5.06e-49 Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 4.8e-19 Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.3e-15 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10 Identity = 45/161 (27.95%), Postives = 72/161 (44.72%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy Swiss-Prot
Match: Q851V5 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04 Identity = 33/112 (29.46%), Postives = 51/112 (45.54%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1) HSP 1 Score: 459 bits (1180), Expect = 3.06e-163 Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1) HSP 1 Score: 297 bits (761), Expect = 2.00e-99 Identity = 163/230 (70.87%), Postives = 177/230 (76.96%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1) HSP 1 Score: 218 bits (556), Expect = 1.10e-69 Identity = 103/125 (82.40%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1) HSP 1 Score: 153 bits (386), Expect = 2.18e-42 Identity = 98/244 (40.16%), Postives = 131/244 (53.69%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. ExPASy TrEMBL
Match: A0A660KTM4 (TF-B3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_009897 PE=4 SV=1) HSP 1 Score: 136 bits (343), Expect = 2.64e-36 Identity = 59/122 (48.36%), Postives = 85/122 (69.67%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 96.3 bits (238), Expect = 3.4e-20 Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 6.6e-16 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0
BLAST of MELO3C004101.jh1 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11 Identity = 45/161 (27.95%), Postives = 72/161 (44.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|