MELO3C003993 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003993
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein kinase domain-containing protein
Location	chr05: 22176516 .. 22176752 (+)
RNA-Seq Expression	MELO3C003993
Synteny	MELO3C003993

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACAACAGAAAAGGGTCGTAGGGGACAAAATGAGATACCTCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGCCCAACACTATTGAACCTCGCCCAGGCTTTAGCTTACCACAGAATGAGTTGTGAAGATATGCTACTTCAAGAGTTGCAGGCAACTCAAGAACAACAAAGCATGAACTATCCTCCGATTGTAGATAACAATCTTTCTTTTACTGACCTCTTGTTTTAA

mRNA sequence

ATGGGGACAACAGAAAAGGGTCGTAGGGGACAAAATGAGATACCTCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGCCCAACACTATTGAACCTCGCCCAGGCTTTAGCTTACCACAGAATGAGTTGTGAAGATATGCTACTTCAAGAGTTGCAGGCAACTCAAGAACAACAAAGCATGAACTATCCTCCGATTGTAGATAACAATCTTTCTTTTACTGACCTCTTGTTTTAA

Coding sequence (CDS)

ATGGGGACAACAGAAAAGGGTCGTAGGGGACAAAATGAGATACCTCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGCCCAACACTATTGAACCTCGCCCAGGCTTTAGCTTACCACAGAATGAGTTGTGAAGATATGCTACTTCAAGAGTTGCAGGCAACTCAAGAACAACAAAGCATGAACTATCCTCCGATTGTAGATAACAATCTTTCTTTTACTGACCTCTTGTTTTAA

Protein sequence

MGTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSMNYPPIVDNNLSFTDLLF

Homology

[Close]

BLAST of MELO3C003993 vs. NCBI nr
Match: XP_038892492.1 (uncharacterized protein LOC120081565 [Benincasa hispida])

HSP 1 Score: 102.1 bits (253), Expect = 2.3e-18
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G + KGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 768 GQSRKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 827

[Close]

BLAST of MELO3C003993 vs. NCBI nr
Match: XP_004142289.1 (serine/threonine-protein kinase PITSLRE [Cucumis sativus] >KAE8648214.1 hypothetical protein Csa_018420 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 757 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 816

[Close]

BLAST of MELO3C003993 vs. NCBI nr
Match: XP_008450230.1 (PREDICTED: uncharacterized protein LOC103491895 isoform X1 [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 765 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 824

[Close]

BLAST of MELO3C003993 vs. NCBI nr
Match: KAA0056339.1 (spindle assembly checkpoint kinase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 233 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 292

[Close]

BLAST of MELO3C003993 vs. NCBI nr
Match: TYK03176.1 (spindle assembly checkpoint kinase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 101 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 160

[Close]

BLAST of MELO3C003993 vs. ExPASy TrEMBL
Match: A0A5A7US46 (Spindle assembly checkpoint kinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00310 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 233 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 292

[Close]

BLAST of MELO3C003993 vs. ExPASy TrEMBL
Match: A0A5D3BYA6 (Spindle assembly checkpoint kinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00810 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 101 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 160

[Close]

BLAST of MELO3C003993 vs. ExPASy TrEMBL
Match: A0A0A0KLC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G051040 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 316 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 375

[Close]

BLAST of MELO3C003993 vs. ExPASy TrEMBL
Match: A0A1S3BPR6 (uncharacterized protein LOC103491895 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491895 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G ++KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 765 GQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 824

[Close]

BLAST of MELO3C003993 vs. ExPASy TrEMBL
Match: A0A6J1D768 (serine/threonine-protein kinase SULU OS=Momordica charantia OX=3673 GN=LOC111017561 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.5e-18
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 2   GTTEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 61
           G + KGRRGQNE+PLPPSVYQRLTSSPTLLNLAQALAYHRM  EDM LQELQATQEQQ++
Sbjct: 772 GQSRKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTI 831

[Close]

BLAST of MELO3C003993 vs. TAIR 10
Match: AT1G69220.1 (Protein kinase superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 5.4e-18
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 4   TEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 62
           ++KGRRGQNE+PLPPSVYQRLT+S +L+NLAQ LAYHR   E+M LQELQATQEQQ++
Sbjct: 766 SKKGRRGQNEMPLPPSVYQRLTTSSSLMNLAQVLAYHRACYEEMPLQELQATQEQQTI 823

[Close]

BLAST of MELO3C003993 vs. TAIR 10
Match: AT1G69220.2 (Protein kinase superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 5.4e-18
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 4   TEKGRRGQNEIPLPPSVYQRLTSSPTLLNLAQALAYHRMSCEDMLLQELQATQEQQSM 62
           ++KGRRGQNE+PLPPSVYQRLT+S +L+NLAQ LAYHR   E+M LQELQATQEQQ++
Sbjct: 739 SKKGRRGQNEMPLPPSVYQRLTTSSSLMNLAQVLAYHRACYEEMPLQELQATQEQQTI 796

The following BLAST results are available for this feature:

BLAST of MELO3C003993 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892492.1	2.3e-18	86.67	uncharacterized protein LOC120081565 [Benincasa hispida]	[more]
XP_004142289.1	3.9e-18	85.00	serine/threonine-protein kinase PITSLRE [Cucumis sativus] >KAE8648214.1 hypothet...	[more]
XP_008450230.1	3.9e-18	85.00	PREDICTED: uncharacterized protein LOC103491895 isoform X1 [Cucumis melo]	[more]
KAA0056339.1	3.9e-18	85.00	spindle assembly checkpoint kinase isoform X1 [Cucumis melo var. makuwa]	[more]
TYK03176.1	3.9e-18	85.00	spindle assembly checkpoint kinase isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C003993 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C003993 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US46	1.9e-18	85.00	Spindle assembly checkpoint kinase isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BYA6	1.9e-18	85.00	Spindle assembly checkpoint kinase isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0KLC6	1.9e-18	85.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G051040 PE=4 SV=1	[more]
A0A1S3BPR6	1.9e-18	85.00	uncharacterized protein LOC103491895 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1D768	2.5e-18	85.00	serine/threonine-protein kinase SULU OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of MELO3C003993 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69220.1	5.4e-18	74.14	Protein kinase superfamily protein	[more]
AT1G69220.2	5.4e-18	74.14	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003993.1	MELO3C003993.1	mRNA