MELO3C003542 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003542
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	chr04: 2017133 .. 2020538 (+)
RNA-Seq Expression	MELO3C003542
Synteny	MELO3C003542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACAATTTTCCATTCCCTAATTCGTGTTTATATTTTTCAAAACAAATACAACTATTAAACGCCTCGCCAACGCGGCTTTGATCGGAAAATTCCCAATTTGCTTCGATCTCTTACCTTCTTGTTGGACCCCAGGATTCTGAATTTGGTTGTACCGATTCGTCTTGTTCCTACTCCATTCATCACTCTTCGGATTAGGTTTTCATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCCTTTTCGCTCCAGGTATTTCTCCTTCTTCTTTCATGTTAAATTCACAGGTACTATATAAGTTTTCCAAGGATTACGAGTTTGGATCATTTATTTCGTGGGATTTTTCAAAAAAAAATTATATATTTACCGGCGTTAAGAATGATGGTTACCCAATTCATGTCACCAAGTGCAATCGTTCATTGTTTTGGGTATTCAGGGAGGGGCTTAGCACAAGACCGGCGGCTGCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACGTGAGTAAAAAGTTTCTTCGTTAATCTATGTTACAGCTTTGTACTTAGGTTTATTGAATTGCAAACTAGAACACGCAGCTACACATTGCTGGTATCTTCATCGGATAACTAGAAATAAAATTTTCTTTCAGTGCTCCTATATTATTCGAATTTAGCCATGTTCGAGGTTGATCTACCTGTATTGGTACTCTTGGAATTTGCACTCCTTTTGGTTCCTTTCTTATTTGAGTTTATGAGCTGTAAATGTGGTATAGTTGTATGCTGTATGCTTATCTTTGGATTTCTTTATAAAGGCGGTAACAGCCAGTTGACGGGCATGGTTTTCTTTCTGTGAAGTTTCGTGATTCCCCTCCATTATTTTTTAGATAAGATACCTTACTTCTCGTTAGTCAAGAAAAACGGGATATATGCGACATTGACATTGAACCAGTACAAGCAGAATCCAATTTTATAAGTCTTCGCTCTTGCATTTCGCGTCTATTGGCTCATCACCATTCAGAATGCTTCATAAGAAATGAAAGAAATGCATACTAATAATGTAACAAGCCCGTATAAGTTATAATTGTTGGAAGGATTCTATGGGTCTGGATTTCCAAGATACTCATCTATCTGTGAGGATTCATTGACTACTTTTAGCCAGGAACATGGGATGATGTAAACCTCAAACAGAATTTATTATTAGTACTCTTCAATTAGAAGTTTTGTAATTGACCTGGAGGCTAATTACCTGGAGAGAAATCATAGAACATACAAACGCACAAAAAGGACTCCAATCCAACAGAATAACACCTAGCTCGAAATTACCAAAAGAAAATATTATGGGTAATACTGACAAGGATGAATTAAACCTAACAAAAGGTTTTTGAGGGTTTGATAATTGAGGAGCACCTCCTCAGGTAAATGTAGAGCTTGATAATGAGACACCAAACCAACTATTTAGTGGATACTGGTTAGTTCAAATGGTTTTTGAGAGGATATTCAATAACACTTCCCTTTATCGATGTAGGATATACTGCAAGGTTTTATCACCACCTGATCTCTAATTATAGAGCACCCACCATTGCACATAGGAGCTTGACAAGCCATATGGAAAACAAATCATCCTAAGAGTAGGTTTTTCTTTTATGGTTCCTTGTGTTTAACGGCCTTGGCACAGCAAATGGAACTCTTTTCTTGAATATCATTAAAAAAAAATTCGGATGACCAGTATTCTATCAATTAGTAATCCAAGATTCTAGGCTTTTATTAAATGAAAGAGAGATCCACCAGGGCAAAAATACTATAGATGGAAGATATAAATGGGGAATGGAATGCTTTCTTTATTGTCTTGCAGCTCCTTCTGCTTCATATTATCAATGTAAGCTCCTCTCTTCTCTTATTGAGGTAAAAAGAACAGACTATGTATTGTTTTCTGTGGTCCCAAAATTGAATGTCTGATTATTGGCTACTTGAATAACAAAAACATGTTAATCTGCAAAAGTAACTTTGTCTGACAACTGGTTGGCTTTTTACTATTATCATTATCATTATTTTCTCTTCAATGTGCAAAACTCGTAGGATCTCAATTTGGCATAGTGGAATCCCCACCCTTCTCGCTGTGACCTATGATTTCTTGTGGTTCTTCAAAGTTTTATCATAATTGTGATTTTATTGAAATAAAGTACAGATTATATATGCCAGTTTGTTTACTTATTCCAGAATAATCTTTTGATCTTTACTTTATGGTGTCTGGTAATTGTCATGTGCAGATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGGTATGTAATTGCTTTCTTAATACTGTCCATGGTTGTCATATTTCCACTGGTGTTTTGTATTTTGATTTTTAATTCTTAGTTTTTACTTATTGATGTTCGTACTTGTGAGAAAAAATTAAGTCGTGATTACGTGAGAAAATATAAATGACATAATTGGAGTAAAAGAAGCCGACAGGGAAAGCAATAGAATCAGAACTAACTTTTGACTATCCATTTGTTAAAATTATTTTGGAGCACGGATATTTTGTTTTTGCTTTCATTTTTTGACAATCCTTTCTAATTTTTAGTTATTTTTTCATTTGCATCTCTAAAGCGCACTAGTCTCTTTCTATTATATCAATAAAAAGTTATATTTCATCTTAACAAAGCAACAGGTTGCTCCAGTAGATTAAAAGAACTCAACTATAAGAAATCAGTCCTCATATTGATTTGCATCGGTTGAATTGAATACTTGTGTAATTGCCCATACCACCTCTCTTCTGACAGATTCAAACTTTTGTTTTTCTTTTTTTTTGTCTTGTTGCAGCAAATGACATTGATAAAAGCTCAAGCAGGGGTGAAGAACAACGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCATCCAGGTCGTCGTGTTTGCGTTGATCTGTTTCTTTATAGTATACATGTGGGCGAAAATGTCCCGAAAATGAATGTTTTTTCTCATTTTGCTCACTATGAATGGAAATACAAGTTTGCTGGTCGGCGACGAGGGAAAAGAAACAGGAAATGATGTTTAAAATATTTATCACTGTCACATCTCAGGTTATAGCATTGGACAGTGATAAAGTAGGCTTTTGTTTTTCTCTTGTAAAAACTTTTGAATATACTTTTTATACGTTGTAAAGATTCGTATTGTGGATCATAACTCTGTAGTATTAATTAATTCATGCCTAAAGTTTTATTTACGTGGAATATCTACGAGTATCATGGTCAACTTATGCATATCTCGACTAATCTTAATATCAAGACATTTGATCTTATGGC

mRNA sequence

AAGACAATTTTCCATTCCCTAATTCGTGTTTATATTTTTCAAAACAAATACAACTATTAAACGCCTCGCCAACGCGGCTTTGATCGGAAAATTCCCAATTTGCTTCGATCTCTTACCTTCTTGTTGGACCCCAGGATTCTGAATTTGGTTGTACCGATTCGTCTTGTTCCTACTCCATTCATCACTCTTCGGATTAGGTTTTCATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCCTTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTGCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAAGCAGGGGTGAAGAACAACGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCATCCAGGTCGTCGTGTTTGCGTTGATCTGTTTCTTTATAGTATACATGTGGGCGAAAATGTCCCGAAAATGAATGTTTTTTCTCATTTTGCTCACTATGAATGGAAATACAAGTTTGCTGGTCGGCGACGAGGGAAAAGAAACAGGAAATGATGTTTAAAATATTTATCACTGTCACATCTCAGGTTATAGCATTGGACAGTGATAAAGTAGGCTTTTGTTTTTCTCTTGTAAAAACTTTTGAATATACTTTTTATACGTTGTAAAGATTCGTATTGTGGATCATAACTCTGTAGTATTAATTAATTCATGCCTAAAGTTTTATTTACGTGGAATATCTACGAGTATCATGGTCAACTTATGCATATCTCGACTAATCTTAATATCAAGACATTTGATCTTATGGC

Coding sequence (CDS)

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCCTTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTGCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAAGCAGGGGTGAAGAACAACGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCATCCAGGTCGTCGTGTTTGCGTTGATCTGTTTCTTTATAGTATACATGTGGGCGAAAATGTCCCGAAAATGA

Protein sequence

MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFALICFFIVYMWAKMSRK

Homology

[Close]

BLAST of MELO3C003542 vs. NCBI nr
Match: XP_008466185.1 (PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like protein [Cucumis melo var. makuwa] >TYK31291.1 bet1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.9 bits (668), Expect = 3.0e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMWAKMSRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of MELO3C003542 vs. NCBI nr
Match: XP_004136265.1 (bet1-like protein At1g29060 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+KMSRK
Sbjct: 121 LICFFIVYMWSKMSRK 136

[Close]

BLAST of MELO3C003542 vs. NCBI nr
Match: XP_022940948.1 (bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.1 bits (640), Expect = 5.3e-63
Identity = 127/136 (93.38%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+K+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of MELO3C003542 vs. NCBI nr
Match: XP_022980898.1 (bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein At1g29060 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 126/136 (92.65%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAAP+RSREGLSTRP+AASDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPSAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+K+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of MELO3C003542 vs. NCBI nr
Match: XP_038896659.1 (bet1-like protein At1g29060 [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 2.0e-62
Identity = 128/136 (94.12%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYN +AA +RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNSNAAAYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+K+SR+
Sbjct: 121 LICFFIVYMWSKISRR 136

[Close]

BLAST of MELO3C003542 vs. ExPASy Swiss-Prot
Match: Q8L9S0 (Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-44
Identity = 90/136 (66.18%), Postives = 118/136 (86.76%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A P+RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           +L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+FA
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           L+ FFI+YMW+KM ++
Sbjct: 121 LLLFFILYMWSKMFKR 134

[Close]

BLAST of MELO3C003542 vs. ExPASy Swiss-Prot
Match: Q8VXX9 (Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.5e-44
Identity = 90/138 (65.22%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 1   MASSSFRGGS--SFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AAP+RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLYGG-AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVV 120
           V++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFIVYMWAKMSRK 137
           FAL+ FF++Y+W+KM ++
Sbjct: 121 FALLVFFVLYIWSKMFKR 137

[Close]

BLAST of MELO3C003542 vs. ExPASy TrEMBL
Match: A0A5A7TAQ3 (Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005890 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMWAKMSRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of MELO3C003542 vs. ExPASy TrEMBL
Match: A0A1S3CQM7 (bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMWAKMSRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of MELO3C003542 vs. ExPASy TrEMBL
Match: A0A0A0LHL4 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889980 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.0e-64
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+KMSRK
Sbjct: 121 LICFFIVYMWSKMSRK 136

[Close]

BLAST of MELO3C003542 vs. ExPASy TrEMBL
Match: A0A6J1FQQ6 (bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 127/136 (93.38%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+K+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of MELO3C003542 vs. ExPASy TrEMBL
Match: A0A6J1J0M1 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.7e-63
Identity = 126/136 (92.65%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAAP+RSREGLSTRP+AASDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPSAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           LICFFIVYMW+K+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of MELO3C003542 vs. TAIR 10
Match: AT1G29060.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-45
Identity = 90/136 (66.18%), Postives = 118/136 (86.76%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A P+RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120
           +L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+FA
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFA 120

Query: 121 LICFFIVYMWAKMSRK 137
           L+ FFI+YMW+KM ++
Sbjct: 121 LLLFFILYMWSKMFKR 134

[Close]

BLAST of MELO3C003542 vs. TAIR 10
Match: AT4G14600.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 177.9 bits (450), Expect = 5.3e-45
Identity = 90/138 (65.22%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 1   MASSSFRGGS--SFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AAP+RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLYGG-AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVV 120
           V++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFIVYMWAKMSRK 137
           FAL+ FF++Y+W+KM ++
Sbjct: 121 FALLVFFVLYIWSKMFKR 137

The following BLAST results are available for this feature:

BLAST of MELO3C003542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466185.1	3.0e-66	100.00	PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like pr...	[more]
XP_004136265.1	2.2e-64	97.06	bet1-like protein At1g29060 [Cucumis sativus]	[more]
XP_022940948.1	5.3e-63	93.38	bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein...	[more]
XP_022980898.1	1.2e-62	92.65	bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein...	[more]
XP_038896659.1	2.0e-62	94.12	bet1-like protein At1g29060 [Benincasa hispida]	[more]

BLAST of MELO3C003542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S0	2.6e-44	66.18	Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV...	[more]
Q8VXX9	7.5e-44	65.22	Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV...	[more]

BLAST of MELO3C003542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAQ3	1.5e-66	100.00	Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CQM7	1.5e-66	100.00	bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1	[more]
A0A0A0LHL4	1.0e-64	97.06	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A6J1FQQ6	2.6e-63	93.38	bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 S...	[more]
A0A6J1J0M1	5.7e-63	92.65	bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=...	[more]

BLAST of MELO3C003542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29060.1	1.8e-45	66.18	Target SNARE coiled-coil domain protein	[more]
AT4G14600.1	5.3e-45	65.22	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 37..104 e-value: 5.6E-5 score: 32.5
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 42..104 score: 12.077553
None	No IPR available	GENE3D	1.20.5.110		coord: 43..104 e-value: 5.4E-9 score: 37.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR12791:SF51	TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 9..135
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 37..103
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 9..135
IPR039899	BET1, SNARE domain	CDD	cd15853	SNARE_Bet1	coord: 49..103 e-value: 1.1143E-11 score: 54.431

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003542.1	MELO3C003542.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030173	integral component of Golgi membrane