MELO3C003411 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003411
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 898869 .. 899428 (-)
RNA-Seq Expression	MELO3C003411
Synteny	MELO3C003411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGTTATTTTCCAACCCAAAAGCCAACCTTGAATTCTCTATGCATATGGAATTCACTATATTTCCAATTCATAATTCTCAATGAGTCATGTCTCCTTTCTCTCTTAATCTCTCTCAATCTCTCTCTCTCTTGATTATATATTCCAAGAGGAGCTCCATAGAATTACAACAAACCCTAAACACAATAATATTCATTGTTATTGAGTAAATTCTTTTTGGTTTAATGACCATGAATTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCGAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGA

mRNA sequence

GGTTGTTATTTTCCAACCCAAAAGCCAACCTTGAATTCTCTATGCATATGGAATTCACTATATTTCCAATTCATAATTCTCAATGAGTCATGTCTCCTTTCTCTCTTAATCTCTCTCAATCTCTCTCTCTCTTGATTATATATTCCAAGAGGAGCTCCATAGAATTACAACAAACCCTAAACACAATAATATTCATTGTTATTGAGTAAATTCTTTTTGGTTTAATGACCATGAATTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCGAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGA

Coding sequence (CDS)

ATGACCATGAATTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCGAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGA

Protein sequence

MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH

Homology

[Close]

BLAST of MELO3C003411 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 3.8e-59
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60

Query: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111

[Close]

BLAST of MELO3C003411 vs. NCBI nr
Match: XP_008465978.2 (PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncharacterized protein E5676_scaffold455G004480 [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 5.5e-58
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 3   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

[Close]

BLAST of MELO3C003411 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39
Identity = 90/116 (77.59%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELT---PHNPIKLDED 60
           MTMNCLTCQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRE-NRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDD 60

Query: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
             ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  HHISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 113

[Close]

BLAST of MELO3C003411 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 88/114 (77.19%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 3   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELT---PHNPIKLDED-- 62
           MNCLTCQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D  
Sbjct: 1   MNCLTCQALPRTQSDRE-NRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDDHH 60

Query: 63  ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  ISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 111

[Close]

BLAST of MELO3C003411 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida])

HSP 1 Score: 163.7 bits (413), Expect = 9.1e-37
Identity = 90/113 (79.65%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP--HNPIKLDEDI 60
           M+MNCLTCQALPRTQSDRE NHGYET SSRGKSCCLYV RRWSAELTP  +  IK D+DI
Sbjct: 1   MSMNCLTCQALPRTQSDRE-NHGYETSSSRGKSCCLYVSRRWSAELTPPSYESIKNDDDI 60

Query: 61  SSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           SSS L KK ++RR  S D G NEPRLVRSSGMRRDWSFEDLGLRD QKK RFH
Sbjct: 61  SSS-LQKKAKNRRVHS-DCGRNEPRLVRSSGMRRDWSFEDLGLRD-QKKVRFH 109

[Close]

BLAST of MELO3C003411 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.8e-59
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60

Query: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111

[Close]

BLAST of MELO3C003411 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.7e-58
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 3   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

[Close]

BLAST of MELO3C003411 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.7e-58
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 3   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

[Close]

BLAST of MELO3C003411 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.6e-39
Identity = 90/116 (77.59%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELT---PHNPIKLDED 60
           MTMNCLTCQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRE-NRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDD 60

Query: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
             ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  HHISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 113

[Close]

BLAST of MELO3C003411 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.7e-28
Identity = 82/128 (64.06%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENN----HGYETPSS--RGKSCCLYVPRRWSAELTP--HNPI 60
           M+MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  I
Sbjct: 1   MSMNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYGHI 60

Query: 61  KLDED---------ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRD 112
           K   D          S SD   K R  R+ S +   NEPRLVRSSGMRRDWSFEDL LRD
Sbjct: 61  KTTADNAREGCSSRKSFSDKKVKDRYLRSGSMNEKENEPRLVRSSGMRRDWSFEDLRLRD 120

[Close]

BLAST of MELO3C003411 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHG------YETPSSRGKSCCL--YVPRRWSAELTPHNPI 60
           M++NCL+CQALPRT S+++ +         E  +  GK+CC+     R WS  L+P    
Sbjct: 1   MSLNCLSCQALPRTDSNKDVDLSGPGPPRVEINNVLGKTCCVNPIGGRNWSGNLSPRIYE 60

Query: 61  KLDEDISSSDLHKKPRSRRAR----SGDYGGN---------EPRLVRSSGMRRDWSFEDL 108
           K+     SS  HK  + ++      SG  G +         +P+LVRS+G+RR+WSFE+L
Sbjct: 61  KIGRP-GSSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSFENL 120

[Close]

BLAST of MELO3C003411 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           M++NCL C  L RT SDR+     ++      +   +               K+  + SS
Sbjct: 1   MSLNCLACHILQRTDSDRDMGSRKDSSFKENFATSAFE--------------KMVRNRSS 60

Query: 61  SDLHKKPRS--RRARSGD---YGG-NEPRLVRSSGMRRDWSFEDL 100
             + ++     RR  S D   YG  +EP+LVRSSG+RRDWSFEDL
Sbjct: 61  LPVVRRVNKGHRRLYSADIMVYGELDEPKLVRSSGIRRDWSFEDL 91

The following BLAST results are available for this feature:

BLAST of MELO3C003411 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038574.1	3.8e-59	100.00	uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]	[more]
XP_008465978.2	5.5e-58	100.00	PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncha...	[more]
KGN60385.1	7.5e-39	77.59	hypothetical protein Csa_002007 [Cucumis sativus]	[more]
XP_031737602.1	1.1e-37	77.19	uncharacterized protein LOC116402474 [Cucumis sativus]	[more]
XP_038887010.1	9.1e-37	79.65	uncharacterized protein LOC120077178 [Benincasa hispida]	[more]

BLAST of MELO3C003411 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C003411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T546	1.8e-59	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E5T4	2.7e-58	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CRL3	2.7e-58	100.00	uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=...	[more]
A0A0A0LEC0	3.6e-39	77.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1	[more]
A0A6J1DZN2	3.7e-28	64.06	uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of MELO3C003411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46770.1	1.6e-10	35.11	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT2G35215.1	3.0e-06	35.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..65
None	No IPR available	PANTHER	PTHR36019	PLANT/PROTEIN	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003411.1	MELO3C003411.1	mRNA