MELO3C003054 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003054
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr09: 10784700 .. 10784903 (-)
RNA-Seq Expression	MELO3C003054
Synteny	MELO3C003054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAAATCGAAGAAGAAGAAGAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTATTCTTGTATTAGCTATGTCGTCCGCTGACGATGGTGACACGCGGCGACTGGAGAAGAGGGGACTCAATGGGCAAAGCACTTTTAAATATGGAGGTCGCCGGAGGGGAGGGGTGGGGTGGTTAAATACTATTGTTCCATAA

mRNA sequence

ATGAATGAAATCGAAGAAGAAGAAGAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTATTCTTGTATTAGCTATGTCGTCCGCTGACGATGGTGACACGCGGCGACTGGAGAAGAGGGGACTCAATGGGCAAAGCACTTTTAAATATGGAGGTCGCCGGAGGGGAGGGGTGGGGTGGTTAAATACTATTGTTCCATAA

Coding sequence (CDS)

ATGAATGAAATCGAAGAAGAAGAAGAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTATTCTTGTATTAGCTATGTCGTCCGCTGACGATGGTGACACGCGGCGACTGGAGAAGAGGGGACTCAATGGGCAAAGCACTTTTAAATATGGAGGTCGCCGGAGGGGAGGGGTGGGGTGGTTAAATACTATTGTTCCATAA

Protein sequence

MNEIEEEEEGGGGGGGGGGGGILVLAMSSADDGDTRRLEKRGLNGQSTFKYGGRRRGGVGWLNTIVP

Homology

[Close]

BLAST of MELO3C003054 vs. NCBI nr
Match: KGN50971.1 (hypothetical protein Csa_008157 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 4.1e-16
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 1  MNEIEEEEEGGGGGGGGGGGGILVLAMSSADDGDTRRLEKRGLNGQSTFKYGGRRRGGVG 60
          MNE+EEEEE  GGGGGGGGGG+L+LAMSSADDGDTRRLEKRGLNG++TFKYGG R G  G
Sbjct: 7  MNEMEEEEE--GGGGGGGGGGVLLLAMSSADDGDTRRLEKRGLNGETTFKYGGHRTGRTG 64

[Close]

BLAST of MELO3C003054 vs. ExPASy TrEMBL
Match: A0A0A0KTE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G381770 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 1  MNEIEEEEEGGGGGGGGGGGGILVLAMSSADDGDTRRLEKRGLNGQSTFKYGGRRRGGVG 60
          MNE+EEEEE  GGGGGGGGGG+L+LAMSSADDGDTRRLEKRGLNG++TFKYGG R G  G
Sbjct: 7  MNEMEEEEE--GGGGGGGGGGVLLLAMSSADDGDTRRLEKRGLNGETTFKYGGHRTGRTG 64

The following BLAST results are available for this feature:

BLAST of MELO3C003054 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50971.1	4.1e-16	81.67	hypothetical protein Csa_008157 [Cucumis sativus]	[more]

BLAST of MELO3C003054 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C003054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTE4	2.0e-16	81.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G381770 PE=4 SV=1	[more]

BLAST of MELO3C003054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003054.1	MELO3C003054.1	mRNA