MELO3C001307 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTTTGTTGGAATGGATTGGTCACAAACAGGTGTCACAAATTTATTTTCTGCTATTAAGGTATGTTTTCATCTCGTCCTCATCAGTTGGACGATCGAATGTAATGAACTATGATGCAATGAACTCTCCCAGTTTAATTTAATTTAATTTAGTTTACTTTATTTTATATATTTTTAGGAAAATGGGTACCAATTGCTTTTTCTCAGTGCACGATCAATTTCTCAGGCGTATCACACCCGCCAATTTCTTTTCAACCTTAAGCAA ATGCCCTTTGTTGGAATGGATTGGTCACAAACAGGTGTCACAAATTTATTTTCTGCTATTAAGGAAAATGGGTACCAATTGCTTTTTCTCAGTGCACGATCAATTTCTCAGGCGTATCACACCCGCCAATTTCTTTTCAACCTTAAGCAA ATGCCCTTTGTTGGAATGGATTGGTCACAAACAGGTGTCACAAATTTATTTTCTGCTATTAAGGAAAATGGGTACCAATTGCTTTTTCTCAGTGCACGATCAATTTCTCAGGCGTATCACACCCGCCAATTTCTTTTCAACCTTAAGCAA MPFVGMDWSQTGVTNLFSAIKENGYQLLFLSARSISQAYHTRQFLFNLKQ Homology
BLAST of MELO3C001307 vs. NCBI nr
Match: XP_022144123.1 (phosphatidate phosphatase PAH2-like isoform X3 [Momordica charantia]) HSP 1 Score: 104.4 bits (259), Expect = 3.0e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. NCBI nr
Match: XP_022144124.1 (phosphatidate phosphatase PAH2-like isoform X4 [Momordica charantia]) HSP 1 Score: 104.4 bits (259), Expect = 3.0e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. NCBI nr
Match: KAA0060884.1 (phosphatidate phosphatase PAH2-like [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 3.0e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. NCBI nr
Match: XP_022951702.1 (phosphatidate phosphatase PAH2-like isoform X1 [Cucurbita moschata] >XP_022951703.1 phosphatidate phosphatase PAH2-like isoform X1 [Cucurbita moschata] >XP_022951705.1 phosphatidate phosphatase PAH2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 104.4 bits (259), Expect = 3.0e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. NCBI nr
Match: XP_038884863.1 (phosphatidate phosphatase PAH2-like isoform X3 [Benincasa hispida]) HSP 1 Score: 104.4 bits (259), Expect = 3.0e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy Swiss-Prot
Match: Q9FMN2 (Phosphatidate phosphatase PAH2 OS=Arabidopsis thaliana OX=3702 GN=PAH2 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.4e-16 Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy Swiss-Prot
Match: Q9SF47 (Phosphatidate phosphatase PAH1 OS=Arabidopsis thaliana OX=3702 GN=PAH1 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.7e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy Swiss-Prot
Match: P32567 (Phosphatidic acid phosphohydrolase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PAH1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.0e-06 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy Swiss-Prot
Match: Q9UUJ6 (Nuclear elongation and deformation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ned1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 3.0e-06 Identity = 20/47 (42.55%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy Swiss-Prot
Match: Q92539 (Phosphatidate phosphatase LPIN2 OS=Homo sapiens OX=9606 GN=LPIN2 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 4.3e-05 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy TrEMBL
Match: A0A6J1KU69 (phosphatidate phosphatase PAH2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496442 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy TrEMBL
Match: A0A6J1CST3 (phosphatidate phosphatase PAH2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013889 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy TrEMBL
Match: A0A6J1GIH0 (phosphatidate phosphatase PAH2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454451 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy TrEMBL
Match: A0A6J1KR21 (phosphatidate phosphatase PAH2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496442 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. ExPASy TrEMBL
Match: A0A5A7V0N5 (Phosphatidate phosphatase PAH2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00170 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of MELO3C001307 vs. TAIR 10
Match: AT5G42870.1 (phosphatidic acid phosphohydrolase 2 ) HSP 1 Score: 85.9 bits (211), Expect = 1.0e-17 Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of MELO3C001307 vs. TAIR 10
Match: AT5G42870.2 (phosphatidic acid phosphohydrolase 2 ) HSP 1 Score: 85.9 bits (211), Expect = 1.0e-17 Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of MELO3C001307 vs. TAIR 10
Match: AT3G09560.2 (Lipin family protein ) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-16 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C001307 vs. TAIR 10
Match: AT3G09560.1 (Lipin family protein ) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-16 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C001307 vs. TAIR 10
Match: AT3G09560.3 (Lipin family protein ) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-16 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|