MELO3C001056 (gene) Melon (DHL92) v4

Overview
NameMELO3C001056
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptioncationic amino acid transporter 6, chloroplastic-like
Locationchr04: 248966 .. 249194 (+)
RNA-Seq ExpressionMELO3C001056
SyntenyMELO3C001056
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATCAGAGAAAGCAGCATTTTCAATGGCTTTTCAAAGGATTGGTTGGAAGTGGGCAAGCAATTTAATAGGTGGTGGAGCAAGCTTAGGAATTGTGGCTTCTCTTCTTGTGGCTATGTTGGGACAAGCAAGATACCTTTGCGCTATTGGGAGGGCTAGGTTAGTTCCTTTTTGGCTCGCCAAGGTTCATCCTTCTACCGGCACACCATTGAATGCCACTCTCTTCTTGG

mRNA sequence

ATATCAGAGAAAGCAGCATTTTCAATGGCTTTTCAAAGGATTGGTTGGAAGTGGGCAAGCAATTTAATAGGTGGTGGAGCAAGCTTAGGAATTGTGGCTTCTCTTCTTGTGGCTATGTTGGGACAAGCAAGATACCTTTGCGCTATTGGGAGGGCTAGGTTAGTTCCTTTTTGGCTCGCCAAGGTTCATCCTTCTACCGGCACACCATTGAATGCCACTCTCTTCTTGG

Coding sequence (CDS)

ATGGCTTTTCAAAGGATTGGTTGGAAGTGGGCAAGCAATTTAATAGGTGGTGGAGCAAGCTTAGGAATTGTGGCTTCTCTTCTTGTGGCTATGTTGGGACAAGCAAGATACCTTTGCGCTATTGGGAGGGCTAGGTTAGTTCCTTTTTGGCTCGCCAAGGTTCATCCTTCTACCGGCACACCATTGAATGCCACTCTCTTCTTG

Protein sequence

MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGTPLNATLFL
Homology
BLAST of MELO3C001056 vs. NCBI nr
Match: KAA0038512.1 (cationic amino acid transporter 6 [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. NCBI nr
Match: TYK31106.1 (cationic amino acid transporter 6 [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 317 MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 376

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 377 PLNATLFL 384

BLAST of MELO3C001056 vs. NCBI nr
Match: XP_022957739.1 (cationic amino acid transporter 6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 137.5 bits (345), Expect = 4.3e-29
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 IAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. NCBI nr
Match: XP_023534059.1 (cationic amino acid transporter 6, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023534063.1 cationic amino acid transporter 6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 4.3e-29
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 IAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. NCBI nr
Match: XP_022995554.1 (cationic amino acid transporter 6, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 137.5 bits (345), Expect = 4.3e-29
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 IAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. ExPASy Swiss-Prot
Match: Q9LZ20 (Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAT6 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.9e-19
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 0

Query: 7   GWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGTPLNATL 66
           GW+W + ++G GAS GI+ SLLVAMLGQARY+C IGR+R+VPFW AK+HP T TP+NA+ 
Sbjct: 340 GWEWVTKVVGIGASFGILTSLLVAMLGQARYMCVIGRSRVVPFWFAKIHPKTSTPVNAST 399

Query: 67  FL 69
           FL
Sbjct: 400 FL 401

BLAST of MELO3C001056 vs. ExPASy Swiss-Prot
Match: Q9SQZ0 (Cationic amino acid transporter 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAT7 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-18
Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 7   GWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGTPLNATL 66
           GW+W + ++G GAS GI+ SL+VAMLGQARY+C IGR+R+VP W AKVHP T TP+NA+ 
Sbjct: 339 GWEWVTRVVGIGASFGILTSLIVAMLGQARYMCVIGRSRVVPIWFAKVHPKTSTPVNASA 398

Query: 67  FL 69
           FL
Sbjct: 399 FL 400

BLAST of MELO3C001056 vs. ExPASy Swiss-Prot
Match: Q9SHH0 (Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=CAT8 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-12
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AF +IG KWA  L+G  A  G+  SLLV  LGQARY   I R+ ++P W A VHP TGT
Sbjct: 348 VAFAQIGMKWAKYLVGICALKGMTTSLLVGSLGQARYTTQIARSHMIPPWFALVHPKTGT 407

Query: 61  PLNATLFL 69
           P+ ATL +
Sbjct: 408 PIYATLLV 415

BLAST of MELO3C001056 vs. ExPASy Swiss-Prot
Match: Q84MA5 (Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.9e-12
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AF  +GW WA  ++  GA  G+   LLV  +GQARY+  I RA ++P WLA+V+  TGT
Sbjct: 337 VAFSAVGWDWAKYIVAFGALKGMTTVLLVGAIGQARYMTHIARAHMMPPWLAQVNAKTGT 396

Query: 61  PLNATLFL 69
           P+NAT+ +
Sbjct: 397 PINATVVM 404

BLAST of MELO3C001056 vs. ExPASy Swiss-Prot
Match: O64759 (Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.3e-11
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQ +G KW   L+  GA  G+   LLV  LGQARY+  I R  ++P   A VHP TGT
Sbjct: 330 VAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIARTHMIPPIFALVHPKTGT 389

Query: 61  PLNATLFL 69
           P+NA L +
Sbjct: 390 PINANLLV 397

BLAST of MELO3C001056 vs. ExPASy TrEMBL
Match: A0A5D3E636 (Cationic amino acid transporter 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003830 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 317 MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 376

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 377 PLNATLFL 384

BLAST of MELO3C001056 vs. ExPASy TrEMBL
Match: A0A5A7T4W3 (Cationic amino acid transporter 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00360 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. ExPASy TrEMBL
Match: A0A6J1K670 (cationic amino acid transporter 6, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111491053 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 IAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. ExPASy TrEMBL
Match: A0A6J1H2V1 (cationic amino acid transporter 6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111459193 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT
Sbjct: 320 IAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. ExPASy TrEMBL
Match: A0A0A0LFB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912900 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVP WLAKVHPSTGT
Sbjct: 320 IAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPSWLAKVHPSTGT 379

Query: 61  PLNATLFL 69
           PLNATLFL
Sbjct: 380 PLNATLFL 387

BLAST of MELO3C001056 vs. TAIR 10
Match: AT5G04770.1 (cationic amino acid transporter 6 )

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-20
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 0

Query: 7   GWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGTPLNATL 66
           GW+W + ++G GAS GI+ SLLVAMLGQARY+C IGR+R+VPFW AK+HP T TP+NA+ 
Sbjct: 340 GWEWVTKVVGIGASFGILTSLLVAMLGQARYMCVIGRSRVVPFWFAKIHPKTSTPVNAST 399

Query: 67  FL 69
           FL
Sbjct: 400 FL 401

BLAST of MELO3C001056 vs. TAIR 10
Match: AT3G10600.1 (cationic amino acid transporter 7 )

HSP 1 Score: 93.2 bits (230), Expect = 8.6e-20
Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 7   GWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGTPLNATL 66
           GW+W + ++G GAS GI+ SL+VAMLGQARY+C IGR+R+VP W AKVHP T TP+NA+ 
Sbjct: 339 GWEWVTRVVGIGASFGILTSLIVAMLGQARYMCVIGRSRVVPIWFAKVHPKTSTPVNASA 398

Query: 67  FL 69
           FL
Sbjct: 399 FL 400

BLAST of MELO3C001056 vs. TAIR 10
Match: AT1G17120.1 (cationic amino acid transporter 8 )

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-13
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AF +IG KWA  L+G  A  G+  SLLV  LGQARY   I R+ ++P W A VHP TGT
Sbjct: 348 VAFAQIGMKWAKYLVGICALKGMTTSLLVGSLGQARYTTQIARSHMIPPWFALVHPKTGT 407

Query: 61  PLNATLFL 69
           P+ ATL +
Sbjct: 408 PIYATLLV 415

BLAST of MELO3C001056 vs. TAIR 10
Match: AT4G21120.1 (amino acid transporter 1 )

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-13
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AF  +GW WA  ++  GA  G+   LLV  +GQARY+  I RA ++P WLA+V+  TGT
Sbjct: 337 VAFSAVGWDWAKYIVAFGALKGMTTVLLVGAIGQARYMTHIARAHMMPPWLAQVNAKTGT 396

Query: 61  PLNATLFL 69
           P+NAT+ +
Sbjct: 397 PINATVVM 404

BLAST of MELO3C001056 vs. TAIR 10
Match: AT2G34960.1 (cationic amino acid transporter 5 )

HSP 1 Score: 67.0 bits (162), Expect = 6.6e-12
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 1   MAFQRIGWKWASNLIGGGASLGIVASLLVAMLGQARYLCAIGRARLVPFWLAKVHPSTGT 60
           +AFQ +G KW   L+  GA  G+   LLV  LGQARY+  I R  ++P   A VHP TGT
Sbjct: 330 VAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIARTHMIPPIFALVHPKTGT 389

Query: 61  PLNATLFL 69
           P+NA L +
Sbjct: 390 PINANLLV 397

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038512.11.5e-29100.00cationic amino acid transporter 6 [Cucumis melo var. makuwa][more]
TYK31106.11.5e-29100.00cationic amino acid transporter 6 [Cucumis melo var. makuwa][more]
XP_022957739.14.3e-2998.53cationic amino acid transporter 6, chloroplastic-like [Cucurbita moschata][more]
XP_023534059.14.3e-2998.53cationic amino acid transporter 6, chloroplastic-like [Cucurbita pepo subsp. pep... [more]
XP_022995554.14.3e-2998.53cationic amino acid transporter 6, chloroplastic-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9LZ201.9e-1966.13Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q9SQZ01.2e-1864.52Cationic amino acid transporter 7, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q9SHH01.7e-1252.94Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=C... [more]
Q84MA52.9e-1247.06Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 S... [more]
O647599.3e-1148.53Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A5D3E6367.1e-30100.00Cationic amino acid transporter 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T4W37.1e-30100.00Cationic amino acid transporter 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A6J1K6702.1e-2998.53cationic amino acid transporter 6, chloroplastic-like OS=Cucurbita maxima OX=366... [more]
A0A6J1H2V12.1e-2998.53cationic amino acid transporter 6, chloroplastic-like OS=Cucurbita moschata OX=3... [more]
A0A0A0LFB21.8e-2897.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G04770.11.3e-2066.13cationic amino acid transporter 6 [more]
AT3G10600.18.6e-2064.52cationic amino acid transporter 7 [more]
AT1G17120.11.2e-1352.94cationic amino acid transporter 8 [more]
AT4G21120.12.1e-1347.06amino acid transporter 1 [more]
AT2G34960.16.6e-1248.53cationic amino acid transporter 5 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1740.10Amino acid/polyamine transporter Icoord: 1..68
e-value: 2.1E-12
score: 48.4
NoneNo IPR availablePANTHERPTHR43243INNER MEMBRANE TRANSPORTER YGJI-RELATEDcoord: 1..68
NoneNo IPR availablePANTHERPTHR43243:SF3CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKEcoord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C001056.1MELO3C001056.1mRNA