MELO3C000351.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C000351.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	40S ribosomal protein S13-like
Location	chr08: 17019426 .. 17020420 (-)
RNA-Seq Expression	MELO3C000351.jh1
Synteny	MELO3C000351.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGAGTTGCGTTTAGTACAAGCTTCTTGTATTTGGTAGATGAGGTGTAGTGACAGGTAGGCAACCAGGTTAGAGAAGCTGTGCTATGTTAAAATCTTGGTCAAACTGGATGTTTTTACTTTCTACTGGTTTCATAGAAAGGAATCAAAAAACTATTCTCTTTAGAATTAGCTTAACTTAGGCAGAAAAATGAATGGAGAAAATAAAGCTATAACACTGCTGTAGTTGCAAGAAGTTCTTATAAAATCGGCAATAAAGTAGGAATGTAGAGACTTTTAGATTTGAGAGACCATATGCAGCTGTGTAATAGTGGAGGTGATCTTCAAAAATCAGTATAATTGATCTTGTTTTCTAATTTTCTAATTTTCTAATTTTTTTATGGTTTAGGTGAGGATATAGTTTTCTAATTTTCTAGACCATATGCAACTGTTTTCTAATTTTCTAGACCATATGCAACTGTTTTCTAATCTTATCTTGTTTCCATCTCACCTTTCCGCTTGGATGATTTAGGTGAGGATATAGTTTGCATCGGTGTCATTCTTCGTGATTCTCACGGTACTGCTCAGGTTAAGAGTGTTACTGGCAATAAGATCTTGCGCATTCTTAAAGCTCATGGTATTGTACTTGTTCTTCTTGTTCATCAATTCGAAATTTTAATGTATTAGTTTTAGGTTTTAGCTATTACCAGGATAGATATGGAAGATTGAGTATATGTTAATGTATTAGTTTTAGGTTTTAGCTATTGTGGTAATTGAATGTGTGTTTTTTTATTACTATCAAAAGGGCTTGCTCCGGAGATTCCTGAGGATCTTTACCATTTTATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAACAGGAAGGACAAAGACTCCAAGTTCAAGTTGATTCTTGTGGAGAGCAGGATTCACCGGCTAGCTCGCTACTACAAGAAGACCAAGAAGGTCCCACCTGTTTGGAAATAGTAAGTGGTCACTTATTTTAT

mRNA sequence

ATGGCTGGAGTTGCGTTTAGTGAGGATATAGTTTGCATCGGTGTCATTCTTCGTGATTCTCACGGTACTGCTCAGGTTAAGAGTGTTACTGGCAATAAGATCTTGCGCATTCTTAAAGCTCATGGGCTTGCTCCGGAGATTCCTGAGGATCTTTACCATTTTATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAACAGGAAGGACAAAGACTCCAAGTTCAAGTTGATTCTTGTGGAGAGCAGGATTCACCGGCTAGCTCGCTACTACAAGAAGACCAAGAAGGTCCCACCTGTTTGGAAATAGTAAGTGGTCACTTATTTTAT

Coding sequence (CDS)

ATGGCTGGAGTTGCGTTTAGTGAGGATATAGTTTGCATCGGTGTCATTCTTCGTGATTCTCACGGTACTGCTCAGGTTAAGAGTGTTACTGGCAATAAGATCTTGCGCATTCTTAAAGCTCATGGGCTTGCTCCGGAGATTCCTGAGGATCTTTACCATTTTATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAACAGGAAGGACAAAGACTCCAAGTTCAAGTTGATTCTTGTGGAGAGCAGGATTCACCGGCTAGCTCGCTACTACAAGAAGACCAAGAAGGTCCCACCTGTTTGGAAATAG

Protein sequence

MAGVAFSEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK

Homology

[Close]

BLAST of MELO3C000351.jh1 vs. NCBI nr
Match: XP_008466991.1 (PREDICTED: 40S ribosomal protein S13-like, partial [Cucumis melo])

HSP 1 Score: 188 bits (478), Expect = 5.42e-60
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER
Sbjct: 1   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 60

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK
Sbjct: 61  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 96

[Close]

BLAST of MELO3C000351.jh1 vs. NCBI nr
Match: KAA0067830.1 (40S ribosomal protein S13-like [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (478), Expect = 1.65e-58
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER
Sbjct: 108 EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 167

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK
Sbjct: 168 NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 203

[Close]

BLAST of MELO3C000351.jh1 vs. NCBI nr
Match: XP_008460618.1 (PREDICTED: 40S ribosomal protein S13-like [Cucumis melo] >KAA0054229.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (460), Expect = 3.88e-57
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER
Sbjct: 9   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER 68

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           N KDKDSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 69  NMKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 104

[Close]

BLAST of MELO3C000351.jh1 vs. NCBI nr
Match: TYK24869.1 (40S ribosomal protein S13-like [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (455), Expect = 2.25e-56
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIV IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER
Sbjct: 9   EDIVYIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER 68

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 69  NRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 104

[Close]

BLAST of MELO3C000351.jh1 vs. NCBI nr
Match: XP_008466776.1 (PREDICTED: 40S ribosomal protein S13-like [Cucumis melo])

HSP 1 Score: 179 bits (455), Expect = 2.47e-56
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIV IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER
Sbjct: 12  EDIVYIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER 71

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 72  NRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 107

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy Swiss-Prot
Match: P62302 (40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 4.1e-42
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGVILRDSHG AQV SVTG+KILRILKAHGLAPEIPEDLYH IKKAVSIRKHLERNRKDK
Sbjct: 50  IGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 110 DSKFRLILVESRIHRLARYYKKTKKLPPVWK 140

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy Swiss-Prot
Match: P59223 (40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-42
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH IKKAV+IRKHLERNRKDK
Sbjct: 50  IGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 110 DSKFRLILVESRIHRLARYYKKTKKLPPVWK 140

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy Swiss-Prot
Match: P59224 (40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-42
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH IKKAV+IRKHLERNRKDK
Sbjct: 50  IGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 110 DSKFRLILVESRIHRLARYYKKTKKLPPVWK 140

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy Swiss-Prot
Match: P46298 (40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-41
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGVILRDSHG AQVKSVTG+KILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER RKDK
Sbjct: 50  IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 110 DSKFRLILVESRIHRLARYYKKTKKLPPVWK 140

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy Swiss-Prot
Match: Q69UI2 (40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117200 PE=3 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-38
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGV+LRD HG   VKSVTG+KILRILKAHGLAPEIPEDLY  IKKAV+IRKHLERNRKDK
Sbjct: 50  IGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYK+TKK+PP WK
Sbjct: 110 DSKFRLILVESRIHRLARYYKRTKKLPPTWK 140

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CSM9 (40S ribosomal protein S13-like OS=Cucumis melo OX=3656 GN=LOC103504390 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 2.63e-60
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER
Sbjct: 1   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 60

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK
Sbjct: 61  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 96

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VKU6 (40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00370 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 8.01e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER
Sbjct: 108 EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 167

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK
Sbjct: 168 NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 203

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UL87 (40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001740 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 1.88e-57
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER
Sbjct: 9   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER 68

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           N KDKDSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 69  NMKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 104

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CCE6 (40S ribosomal protein S13-like OS=Cucumis melo OX=3656 GN=LOC103499396 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 1.88e-57
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER
Sbjct: 9   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER 68

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           N KDKDSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 69  NMKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 104

[Close]

BLAST of MELO3C000351.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DNI1 (40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001380 PE=3 SV=1)

HSP 1 Score: 179 bits (455), Expect = 1.09e-56
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 8   EDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLER 67
           EDIV IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH IKKAVSIRKHLER
Sbjct: 9   EDIVYIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER 68

Query: 68  NRKDKDSKFKLILVESRIHRLARYYKKTKKVPPVWK 103
           NRKDKDSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 69  NRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 104

[Close]

BLAST of MELO3C000351.jh1 vs. TAIR 10
Match: AT3G60770.1 (Ribosomal protein S13/S15 )

HSP 1 Score: 170.6 bits (431), Expect = 6.4e-43
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH IKKAV+IRKHLERNRKDK
Sbjct: 50  IGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 110 DSKFRLILVESRIHRLARYYKKTKKLPPVWK 140

[Close]

BLAST of MELO3C000351.jh1 vs. TAIR 10
Match: AT4G00100.1 (ribosomal protein S13A )

HSP 1 Score: 170.6 bits (431), Expect = 6.4e-43
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 13  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHFIKKAVSIRKHLERNRKDK 72
           IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH IKKAV+IRKHLERNRKDK
Sbjct: 50  IGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDK 109

Query: 73  DSKFKLILVESRIHRLARYYKKTKKVPPVWK 104
           DSKF+LILVESRIHRLARYYKKTKK+PPVWK
Sbjct: 110 DSKFRLILVESRIHRLARYYKKTKKLPPVWK 140

The following BLAST results are available for this feature:

BLAST of MELO3C000351.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466991.1	5.42e-60	100.00	PREDICTED: 40S ribosomal protein S13-like, partial [Cucumis melo]	[more]
KAA0067830.1	1.65e-58	100.00	40S ribosomal protein S13-like [Cucumis melo var. makuwa]	[more]
XP_008460618.1	3.88e-57	95.83	PREDICTED: 40S ribosomal protein S13-like [Cucumis melo] >KAA0054229.1 40S ribos...	[more]
TYK24869.1	2.25e-56	95.83	40S ribosomal protein S13-like [Cucumis melo var. makuwa]	[more]
XP_008466776.1	2.47e-56	95.83	PREDICTED: 40S ribosomal protein S13-like [Cucumis melo]	[more]

BLAST of MELO3C000351.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62302	4.1e-42	93.41	40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1	[more]
P59223	9.1e-42	92.31	40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1	[more]
P59224	9.1e-42	92.31	40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1	[more]
P46298	1.2e-41	93.41	40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1	[more]
Q69UI2	1.6e-38	85.71	40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g011...	[more]

BLAST of MELO3C000351.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSM9	2.63e-60	100.00	40S ribosomal protein S13-like OS=Cucumis melo OX=3656 GN=LOC103504390 PE=3 SV=1	[more]
A0A5A7VKU6	8.01e-59	100.00	40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7UL87	1.88e-57	95.83	40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CCE6	1.88e-57	95.83	40S ribosomal protein S13-like OS=Cucumis melo OX=3656 GN=LOC103499396 PE=3 SV=1	[more]
A0A5D3DNI1	1.09e-56	95.83	40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of MELO3C000351.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60770.1	6.4e-43	92.31	Ribosomal protein S13/S15	[more]
AT4G00100.1	6.4e-43	92.31	ribosomal protein S13A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	SMART	SM01387	Ribosomal_S15_2	coord: 33..103 e-value: 2.1E-7 score: 40.4
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 37..97 e-value: 4.2E-14 score: 52.5
IPR000589	Ribosomal protein S15	PROSITE	PS00362	RIBOSOMAL_S15	coord: 61..91
IPR000589	Ribosomal protein S15	CDD	cd00353	Ribosomal_S15p_S13e	coord: 33..103 e-value: 1.87303E-23 score: 83.7066
None	No IPR available	GENE3D	4.10.860.130		coord: 11..45 e-value: 5.8E-18 score: 66.3
None	No IPR available	GENE3D	1.10.287.10		coord: 46..103 e-value: 5.4E-33 score: 115.1
None	No IPR available	PANTHER	PTHR11885:SF22	40S RIBOSOMAL PROTEIN S13	coord: 12..103
IPR023029	Ribosomal protein S15P	PANTHER	PTHR11885	RIBOSOMAL PROTEIN S15P/S13E	coord: 12..103
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 29..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000351.jh1.t1	MELO3C000351.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome