![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MELO3C000254 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGAAAGGGTATTGAAAACTGTAAGCTTTGCTTTGTGGGACTGAAACAAAAAAACAGAGTCAGACCTCCATGATTCCATTATATTATACCTCTCTCTCCATTCCAATTCCCACAACTGTTCAACAAAATTCAAAAACACTCTCTACATACATAATACAGAGTGAGAGAGAGAGAAATTTTTCATTTTATCATAGACGGCGACAGCTCTTGCAGGCAGAAATGGATAGGCAACACAACAGAGGCCTCTCACAAAAGCCATTTTTTGGGGATTTGGTAACGTTGAGTCAGTTCTTTTAGAGAGAAACTGAGAAATTAAAGACAACCCAACAAATTTTTTTCCCTCGGAAGCGTTTTTCTATGCTGCAGAAAGCTTGATTTGTAACTGAAGGAGATGAGGGAGAGAAAGAAATTGAGCAGATAATAATCACAGACACAGTCTGTTACAGAAAAAAAGCAGAAAAAAGAAACGAGGGTGGGGAAAATAAACTTGTACGGTTAATTATGATTGCTTGCTTAACCGTCCTGTTTTCTTAGCTTTTTCCCTCTCTCTTTCTTTCTTCTGTGGCTTGTCCTTTGATTGATCGGTAGATGGGGTAGCAGTGCACGACAGTTTACCATTCTTTCAGACTGTGAAAAACAGAGCAAGAGAGAGAGAGAGAGAGGAGAGACCCTTTTCCCCTGTTCCTATTTTCTCCTCTTCTTCTTTGGTTTCTGTTGTTGTTCTTCAATCTTTGGCATTTTAGACTGAGACCCGTTTTTTCAATTTGGATGACGCTTTACGAAGAGAATCCAGGGGAGTCTCGCAAAGGTGAAACCCAGTTGAATCTCTCTATTTTTTTCAAATTTGGTGTTTATCAAAACACCCAAAGGACTTTGAAATTTCGAGGTGTTTTTGGTGTTTGATTGATTTTGTTTGGTGGGTAGGTTTGGAAGGTGAGGATCTGTATGAGGAGCTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTGTCGATGGAGAAAGGGTTTTTTACTTCCCGCAGGGTCATATGGAACAAGTATTTTGTCATCTCTTTTTCAATTTCACCCTTGAAACAAAAACCCCTCATAATCTTAGATGCTGAAATTTCTTCTGCTTTTTGGTTCTTCATCAGTTGGAAGAGTCCACAAATCAGGAGCTTAATCATCAAATCCCTCATTTTGATCTCCCTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGTATTTCTTATTCTCTTTTGTTCATGTACACTTGCCTACTTT AATTTGAAAGGGTATTGAAAACTGTAAGCTTTGCTTTGTGGGACTGAAACAAAAAAACAGAGTCAGACCTCCATGATTCCATTATATTATACCTCTCTCTCCATTCCAATTCCCACAACTGTTCAACAAAATTCAAAAACACTCTCTACATACATAATACAGAGTGAGAGAGAGAGAAATTTTTCATTTTATCATAGACGGCGACAGCTCTTGCAGGCAGAAATGGATAGGCAACACAACAGAGGCCTCTCACAAAAGCCATTTTTTGGGGATTTGGTAACGTTGAGTCAGTTCTTTTAGAGAGAAACTGAGAAATTAAAGACAACCCAACAAATTTTTTTCCCTCGGAAGCGTTTTTCTATGCTGCAGAAAGCTTGATTTGTAACTGAAGGAGATGAGGGAGAGAAAGAAATTGAGCAGATAATAATCACAGACACAGTCTGTTACAGAAAAAAAGCAGAAAAAAGAAACGAGGGTGGGGAAAATAAACTTGTACGGTTAATTATGATTGCTTGCTTAACCGTCCTGTTTTCTTAGCTTTTTCCCTCTCTCTTTCTTTCTTCTGTGGCTTGTCCTTTGATTGATCGGTAGATGGGGTAGCAGTGCACGACAGTTTACCATTCTTTCAGACTGTGAAAAACAGAGCAAGAGAGAGAGAGAGAGAGGAGAGACCCTTTTCCCCTGTTCCTATTTTCTCCTCTTCTTCTTTGGTTTCTGTTGTTGTTCTTCAATCTTTGGCATTTTAGACTGAGACCCGTTTTTTCAATTTGGATGACGCTTTACGAAGAGAATCCAGGGGAGTCTCGCAAAGGTTTGGAAGGTGAGGATCTGTATGAGGAGCTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTGTCGATGGAGAAAGGGTTTTTTACTTCCCGCAGGGTCATATGGAACAATTGGAAGAGTCCACAAATCAGGAGCTTAATCATCAAATCCCTCATTTTGATCTCCCTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGTATTTCTTATTCTCTTTTGTTCATGTACACTTGCCTACTTT ATGACGCTTTACGAAGAGAATCCAGGGGAGTCTCGCAAAGGTTTGGAAGGTGAGGATCTGTATGAGGAGCTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTGTCGATGGAGAAAGGGTTTTTTACTTCCCGCAGGGTCATATGGAACAATTGGAAGAGTCCACAAATCAGGAGCTTAATCATCAAATCCCTCATTTTGATCTCCCTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGTATTTCTTATTCTCTTTTGTTCATGTACACTTGCCTACTTT MTLYEENPGESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVVNIRLLVFLILFCSCTLAYF Homology
BLAST of MELO3C000254 vs. NCBI nr
Match: XP_008467007.2 (PREDICTED: auxin response factor 11, partial [Cucumis melo]) HSP 1 Score: 205.7 bits (522), Expect = 1.8e-49 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. NCBI nr
Match: KAA0050656.1 (auxin response factor 18 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. NCBI nr
Match: XP_011659155.1 (auxin response factor 18 isoform X2 [Cucumis sativus] >KAE8646219.1 hypothetical protein Csa_016342 [Cucumis sativus]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. NCBI nr
Match: XP_004139643.1 (auxin response factor 18 isoform X1 [Cucumis sativus]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. NCBI nr
Match: TYK07778.1 (auxin response factor 18 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy Swiss-Prot
Match: Q0JCZ4 (Auxin response factor 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF9 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-21 Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy Swiss-Prot
Match: Q9ZPY6 (Auxin response factor 11 OS=Arabidopsis thaliana OX=3702 GN=ARF11 PE=2 SV=3) HSP 1 Score: 102.1 bits (253), Expect = 3.8e-21 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy Swiss-Prot
Match: Q9C5W9 (Auxin response factor 18 OS=Arabidopsis thaliana OX=3702 GN=ARF18 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 8.4e-21 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy Swiss-Prot
Match: Q6YVY0 (Auxin response factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF7 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.2e-20 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy Swiss-Prot
Match: K4DF01 (Auxin response factor 2B OS=Solanum lycopersicum OX=4081 GN=ARF2B PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 7.1e-20 Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy TrEMBL
Match: A0A1S3CSJ1 (auxin response factor 11 OS=Cucumis melo OX=3656 GN=LOC103504421 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 8.9e-50 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy TrEMBL
Match: A0A5D3C9C4 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00590 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy TrEMBL
Match: A0A5A7U902 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001330 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy TrEMBL
Match: A0A0A0K887 (Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_7G329330 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of MELO3C000254 vs. ExPASy TrEMBL
Match: A0A1S4E3F7 (auxin response factor 11-like OS=Cucumis melo OX=3656 GN=LOC103500375 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.4e-39 Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of MELO3C000254 vs. TAIR 10
Match: AT2G46530.1 (auxin response factor 11 ) HSP 1 Score: 102.1 bits (253), Expect = 2.7e-22 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MELO3C000254 vs. TAIR 10
Match: AT2G46530.3 (auxin response factor 11 ) HSP 1 Score: 102.1 bits (253), Expect = 2.7e-22 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MELO3C000254 vs. TAIR 10
Match: AT3G61830.1 (auxin response factor 18 ) HSP 1 Score: 100.9 bits (250), Expect = 6.0e-22 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of MELO3C000254 vs. TAIR 10
Match: AT4G23980.1 (auxin response factor 9 ) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20 Identity = 47/68 (69.12%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of MELO3C000254 vs. TAIR 10
Match: AT4G23980.2 (auxin response factor 9 ) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20 Identity = 47/68 (69.12%), Postives = 53/68 (77.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|