MELO3C000043 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000043
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr05: 21674564 .. 21674830 (+)
RNA-Seq Expression	MELO3C000043
Synteny	MELO3C000043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAG

mRNA sequence

GGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAG

Coding sequence (CDS)

ATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA

Protein sequence

MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY

Homology

[Close]

BLAST of MELO3C000043 vs. NCBI nr
Match: KAB2066253.1 (hypothetical protein ES319_A09G146900v1 [Gossypium barbadense] >KAG4109265.1 hypothetical protein ERO13_1Z049582v2 [Gossypium hirsutum] >KAG4154842.1 hypothetical protein ERO13_D03G075240v2 [Gossypium hirsutum] >KAG4204310.1 hypothetical protein ERO13_A04G039501v2 [Gossypium hirsutum])

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 35

[Close]

BLAST of MELO3C000043 vs. NCBI nr
Match: PQP98137.1 (hypothetical protein Pyn_20560 [Prunus yedoensis var. nudiflora] >TQD86668.1 hypothetical protein C1H46_027794 [Malus baccata])

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 37 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 71

[Close]

BLAST of MELO3C000043 vs. NCBI nr
Match: KAB2088866.1 (hypothetical protein ES319_A03G028100v1 [Gossypium barbadense] >KAG4206623.1 hypothetical protein ERO13_A03G019700v2 [Gossypium hirsutum])

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 40 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 74

[Close]

BLAST of MELO3C000043 vs. NCBI nr
Match: KAG4202161.1 (hypothetical protein ERO13_A05G323748v2 [Gossypium hirsutum] >KAG4204303.1 hypothetical protein ERO13_A04G039316v2 [Gossypium hirsutum])

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 23 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 57

[Close]

BLAST of MELO3C000043 vs. NCBI nr
Match: KAB2037637.1 (hypothetical protein ES319_D03G089200v1 [Gossypium barbadense])

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 23 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 57

[Close]

BLAST of MELO3C000043 vs. ExPASy TrEMBL
Match: A0A314Y2L9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20560 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 37 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 71

[Close]

BLAST of MELO3C000043 vs. ExPASy TrEMBL
Match: A0A5J5UFM6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G146900v1 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 35

[Close]

BLAST of MELO3C000043 vs. ExPASy TrEMBL
Match: A0A5J5WC99 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G028100v1 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 40 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 74

[Close]

BLAST of MELO3C000043 vs. ExPASy TrEMBL
Match: A0A5J5S2V4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D03G089200v1 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 23 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 57

[Close]

BLAST of MELO3C000043 vs. ExPASy TrEMBL
Match: A0A540LJL3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027794 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 36
          MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 37 MVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 71

The following BLAST results are available for this feature:

BLAST of MELO3C000043 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB2066253.1	2.5e-09	100.00	hypothetical protein ES319_A09G146900v1 [Gossypium barbadense] >KAG4109265.1 hyp...	[more]
PQP98137.1	2.5e-09	100.00	hypothetical protein Pyn_20560 [Prunus yedoensis var. nudiflora] >TQD86668.1 hyp...	[more]
KAB2088866.1	2.5e-09	100.00	hypothetical protein ES319_A03G028100v1 [Gossypium barbadense] >KAG4206623.1 hyp...	[more]
KAG4202161.1	2.5e-09	100.00	hypothetical protein ERO13_A05G323748v2 [Gossypium hirsutum] >KAG4204303.1 hypot...	[more]
KAB2037637.1	2.5e-09	100.00	hypothetical protein ES319_D03G089200v1 [Gossypium barbadense]	[more]

BLAST of MELO3C000043 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C000043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A314Y2L9	1.2e-09	100.00	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_205...	[more]
A0A5J5UFM6	1.2e-09	100.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G146900v1 PE...	[more]
A0A5J5WC99	1.2e-09	100.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G028100v1 PE...	[more]
A0A5J5S2V4	1.2e-09	100.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D03G089200v1 PE...	[more]
A0A540LJL3	1.2e-09	100.00	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027794 PE=4 SV=1	[more]

BLAST of MELO3C000043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000043.1	MELO3C000043.1	mRNA