MELO.jh102513.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102513.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr10: 16799935 .. 16805614 (+)
RNA-Seq Expression	MELO.jh102513.1
Synteny	MELO.jh102513.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACGTGCTGCTTTAGCACATTTTCATGCTGCCCAACAGACCCATGTCGCACTTGCTCAGACCCAGGTCGCTTCTGCCCAGGCCCTAATGGTACCTCAGATCGTGTCAGACCAGCTGTCAGCTGAGGCTAAACATCTGAGGGACTTTAGGAAGTATAATCCTAAAACTTTTGACGAGTCCATGGACAACCCTACCAAGGCCCAGATGTGGTTGACCTCTATAGAGAAATTCTGCAGGTACATGAAATGCCCTAATGACCAGAAGGTGCAGTGTGTAGTTTTCTTCTTGGAAGATAGAGGTATTGCATGGTGAGAGACTGCTGAGAGAATGTTGGGGGGCGACGTCAGCAAGATAACCTGAGAGCAGTTCAAGGAGAGCTTCTATGCTAAATTCTTCTCTGCCAACGTGAAATACGCTAAGCAGTAAGAATTTCTGAACTTGGAGCAAGGCGACAGGACTGTGGAGCAGTATGATGCCGAGTTCGATATGCTATCCCGTTTTGCCCCTGATGTAGTAAAGGATGAGGAGGCTAGGACTGAGAAGTTTGTTAGAGGTCTTAGACTAGACCTCCAGGGTATCGTTCAAGCCCTCAGGCCAACCACCCATGCTGATGCACTACACCTGGCACTGGACTTGAGTCTGCACGAGAGAGCTGATCCATCCAAGGCTGCAGGCAGAGGGTCAACTCTCGGTCAGAAGAGGAAGGTTGAGTCGCAGATTGCTGTAGCACCGCAACGAAACCTGAGGTCAGGAGGTGTCTTCCAGCGGTATCGTAAGGAGCTTGTTGCAGCAGGAAGAACATTGAGAGAGCTACCTGTTTGTCGTAGATGTGGGAGAGCTCATGGAGGTCGTTTCTTGATAGGGAGCGGAGTTTGCTTCAAGTGCAAGCAACCAGGACATACCGCTGACGCTTGTCCTCAGAAACTCATTGAGACTACCCCGCACCAGCCTCCCGCTTCCCAGCAAGGAAGAGTTTTTGCCATTACACGTCAGGAGGTCGAGCGAGCTGGTACTATGGTGACAGGTACGCTCCCAATCTTGGGGCACTATGCACTTATATTGTTTGATTCTGGGTCATCCCATTCTTTCATATCTTCAGTTTTTGTTCGACAAATGGATTTAGAAGTAGAACCGTTGGGTAGTATACTATCTGTTTCTACCCCATTGGGAGAAGTCATGTTGTCTAAAGATAAGATAAAGGCATGTCAAGTAGAGGTAGCGAACTATGTGTTGGATGTGATCTTACTAGTGTTGGACATGCGAGATTTTGATAAGATAAACGATTGTGTACCAAAAGGATTAAAAGAATCATTTAGCCAAATCTAAATGATTGTGTAGACAAATCTAAACGATTGTATAAAAAAAATAAACGATCATGTTGCAAAATAATTTAAAAAAATTGTTTAACCAAATCTAAATGACTGTGTAGACAAATCTAAACGATCGTATAAAAAAATAAATGATTGTGTAGCAAAAGAATTTTAAAAAATCGTTTAGCAAAATCTAAACGATCATGTAGACAAATCTAAACGATTGTATAAAAAAATAAACGATCGTGTAGCAAAAGAATCTTAAAAAATCGTTTAGCCAAATCTAAACGATCGTGTACCAAGTTTGAAACAAAAAAATCGTTTAGATTTGGGTCCCCAAATTTAAACGATCAAATCTAAACAATGTGTAACCAAATTTAAATCTAACCAAATTAAACGATCCTGTAACAAAATTAAACGATATAATTGAAAAAATAAGTTGTAGCCATATCCAAACGATCGTGTATCAAACAATAGCCAAATTCAAATCTAAACGTTAAATCTAAATGATCGTGTAACCAAATATATAAAAGTAAATGATATAATTAAAAAATAAATTGTAGTCATATCTAAACGATCGTCTACCAAACAATAGCAAAATCTAAACGATCGCAAATATATTACGCGCATTGTTGACGGCGTAGCTGACGGGACATTTTTGGTATTTTACACGGTGAGTCTATGAGTTTTTTCCATTTTCGAAATTATTCTATACAGTGTAAATACTTTTACCGCTTTTTTATATTTTTGAAAAGACCCCTTCATTTAACTTTTTTTTTTCTAAATAGAGTAATTAATTTAATATCATTTCTTCAATTTTCTAGAAACTAAATCTCGGAGAAAATTTGATTGGAAAGATACATTATAAAATACCAAACACATGTTTTTCAAAACTACAAAACCAAAAAAGTAATTTATCTGAAAATTTAAAAATTTATGAGATACTTTCGATTTCAAAAAGCTATTTGACATAAAATCAAAATTAAGGGCCTGTTTAGGGTTAGAGTTAACACTGTGGGCGTAGGTTAGCCCAATCCTAACCCTCGTTTGGGCCAAGGTTTATGGAAATCCTAGTTTTAGGATTTTCATAAACCCGTTTTAACCTCCCTTCAAGCCGTGTTTTGCCTCCCTTCAACCCGTGTTTCCGCCTCCCTTCAACCCGTGTTTCTGCCTCCCTTCAACCCGTATTTACGTCTCCCTTCAGACTGTGTCAATCTTCTTCCTTCACTTCCGTCAATATTCTTCCTTCACTTTTGCCTTGTTGAATCTCTCTCTCCATGAGTCTAATAAAGTTATTATCACAAATGCTGGAGCCGTGAAGTCGCTGGTTTATGTGCTCAAAATCGGTACGAAAACTTCGAAACAGAATGCGGCGTGTGCTTTGATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGAGTTTAGCAGAGAAGGCGATGGTGGTTTTGAGTAACCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGAGTTGGTGAAAGGGAAAGAATTTGCAGTGTTGACACTCTTGTAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTTAGCGAAGGTGGAATTTCTCCTTTAGTTGCACTTTCTCAAACTGGAAGCATTCGAGCAAAGCATAAGGTGATTACCATAAACTGATTAGTCGTTAATTATTACATGATTTTTTGTTAGCTGATTCTATGAAATGAACACCTTGATGAAAAATTGTTAATTTTTGCAGGCAGAAACACTTCTGGAGTATCTAAGAGAACCAAGACAAGTTGCATCCTCATCAAGTCCTTAACAATTGGCCTGAGATGGTTTTTTTATGAGGTAATTGTATTATTAAGTAGTGGTATCGTGTATAGAGAGTGGGTTTTTTGATGGTTTGTACAACATGGTTGAGAATGTTGGAAGAATGAAGATTGTAGAATGAAGATTGTAGAATGAAGATTGTAGAATGAAGATTGTAGAATGAAGTTAGTGCAGTTAGTAAAGCTAAAAACTGACGGTTAGAGAAGAAGTTGTATGATTTTTAACTAGGTTTTGAGATATCCTTTTTAATGACATTCCGATTTACTAAATAGTGTAATATCATTTGGTTTGATTTTCTAGGTTTGGGGATTTGATGAAATTCTGATTGGTGGTTGTGTGTCTTGTATGGGTGAAAAACCCAAATTCTATGGAACTCATTGTCTTTCTTGCAGCTCTATGTGAAGTACATTGAAGTTCTGAAATTTACGTAATTTAATTTTCATATTTTGGTTCATTTTGGTCGATTCTATTCTACTTATTATTGATTGATTAAATTTTAAATGGTAGTTGATCTTAAAGTCCGTTTATTCTTATTTTTGACCAGCCTGAAGTATATTTTTCTTTTTAGTTGATTAATAATGTTTTCATTATATATTTACAAAAAAGAAAAAAGATTTAGGGAGGACTAATAATCAAAATGAATACACATAAGAAAATCAATGAAAATGGTCAATATTTGATGAATTAGAATGTAATTAAGATTATTAAAAATCAAAGAAGTATTAAAACATATGTGAAAATTGAGATAGAACAAAAATGAGTAAATGATATCATAAAAAAATGAAAATGATACAAAATTGAGTTTAATTGAAAACCGCATTAACAAAATTGGTGTAATATTGGACTCAAAACACTCGATTCAAACATGAATTTTGAATTGCAATGCATTCCAATCTCATTACAATGTCCAAACATCCTCTAAATTTTTGTCCAAGAAAAAAAAAAAGGAAAATTGCCAAGAAAGACATAATCATTATATGGAAGTCTAAGAAACATTCAATGAAGATCTTACCTATCTTGAATTATGGGGGGTTAGGGTTATGTAATCCAACCCCCGTTTGGGGGAAGGGTTATGTAACCCTAGTTTTAACTCCTTAACCCTTCCTCAACCCTTCTTCAACACTTCTTCAACTTTTCCTCAATCCTTCTTCACAACATTATCATAACACTTCCTTCATAACCTTCTTCACAACATTATCATAACACTTCCTTCATAACCCTTCCCCCAAACACATCTTATCATAACACTTCCTTCATAACCCTTTCCCCAAACACATCTTATTATAATCCTAGGTTTATTTTAACACTAGGTTTATCATAACCCTAACCCCCATAACCCAACCCTTTCCCCAAACGGCCCCGAAAAGATATATATTATTATCTTATCTAAAAAAGAAAAGACATATATATTATTAGTTTCCATATAAACATGTACAATTTGTTGACAAATTATTTTGAAATTAGATAATTGTCTTTACTAATTTAATAACATTACACGTATAAAAAATTATTTGTAATAAGAGTGGTTTTGACACTTTCGTAAAAAAATATGCAATAATATTTTTTTTCTCATATTTACAATGTCATTTAAAAAAGTTATACTACATAAAAAAAAAAATTAATAACCCAACCCACATAACACTTCCTCCCAATGAATTTTATCATAAATTGCACGTAAATCTATCCACTAACTCTTTCTCTAAACACATCTTATCATAAAACCTCATTAAGTCTTCCCATCTAACCCTTCTCCTATACACATATTATCATAAAACTACATTTCTAAATACTTCTCCAAACAAATGTTATGATAAAACTAAAGCTAACCATTTTTAAAACGACCATTCTCCCAAATGTACCCTAAAAATTTAAATCAACGAAGGAAAGCTTATAAAAAAACAATAAAATAAAGAAAAGTAAAATCGAATTAATTCCAAGTAGAGAGAGATGATTGTTAAACCCACCGCGATTTAGTGCTTAGAGAACCCCTCGCCTTTTCTTCAGTTCTTCCGTCGCCGTTGAACCGAAAAGCTTTTAAGAACCCTCGCCGGCGCCGTCAATCCTTTTCTCAATAACATCCATCTCGTCGACGCTTCCGGGGTTAGTAGTTATACCTCAACTGTTTTTACCTTTTCTTTTCTTTTCTTTTTGTTTGTAGCGATTTGATTGATTCTGTCTTCTCTCCCATTTTCATGTAAATAGTGTATTTATTTCTGGTGTTTGAAAACGAAAAATTGTTGATCATTAGTATCCATTTCTGTTGTTTGGAAACGAAAAATTGTTGACCGTTAGTTGTTTACAGGCGGAGTTCGTTTTCGAGGTTAGCTAA

mRNA sequence

ATGCTACGTGCTGCTTTAGCACATTTTCATGCTGCCCAACAGACCCATGTCGCACTTGCTCAGACCCAGGTCGCTTCTGCCCAGGCCCTAATGGTACCTCAGATCGTGTCAGACCAGCTGTCAGCTGAGGCTAAACATCTGAGGGACTTTAGGAAGTATAATCCTAAAACTTTTGACGAGTCCATGGACAACCCTACCAAGGCCCAGATGTGGTTGACCTCTATAGAGAAATTCTGCAGGTACATGAAATGCCCTAATGACCAGAAGGTGCAGTGTGTAGTTTTCTTCTTGGAAGATAGAGGTATTGCATGGACTGTGGAGCAGTATGATGCCGAGTTCGATATGCTATCCCGTTTTGCCCCTGATGTAGTAAAGGATGAGGAGGCTAGGACTGAGAAGTTTGTTAGAGGTCTTAGACTAGACCTCCAGGGTATCGTTCAAGCCCTCAGGCCAACCACCCATGCTGATGCACTACACCTGGCACTGGACTTGAGTCTGCACGAGAGAGCTGATCCATCCAAGGCTGCAGGCAGAGGGTCAACTCTCGGTCAGAAGAGGAAGGTTGAGTCGCAGATTGCTGTAGCACCGCAACGAAACCTGAGGTCAGGAGGTGTCTTCCAGCGGTATCGTAAGGAGCTTGTTGCAGCAGGAAGAACATTGAGAGAGCTACCTGTTTGTCGTAGATGTGGGAGAGCTCATGGAGGTCGTTTCTTGATAGGGAGCGGAGTTTGCTTCAAGTGCAAGCAACCAGGACATACCGCTGACGCTTGTCCTCAGAAACTCATTGAGACTACCCCGCACCAGCCTCCCGCTTCCCAGCAAGGAAGAGTTTTTGCCATTACACGTCAGGAGGTCGAGCGAGCTGGTACTATGGTGACAGGTACGCTCCCAATCTTGGGGCACTATGCACTTATATTGTTTGATTCTGGGTCATCCCATTCTTTCATATCTTCAGTTTTTGTTCGACAAATGGATTTAGAAGTAGAACCGTTGGGTAGTATACTATCTGTTTCTACCCCATTGGGAGAAGTCATGTTGTCTAAAGATAAGATAAAGGCATGTCAAGTAGAGCCGTGTTTTGCCTCCCTTCAACCCGTGTTTCCGCCTCCCTTCAACCCGTGTTTCTGCCTCCCTTCAACCCGTATTTACGTCTCCCTTCAGACTGTGTCAATCTTCTTCCTTCACTTCCGTCAATATTCTTCCTTCACTTTTGCCTTGTTGAATCTCTCTCTCCATGAGTCTAATAAAGTTATTATCACAAATGCTGGAGCCGTGAAGTCGCTGGTTTATGTGCTCAAAATCGGTACGAAAACTTCGAAACAGAATGCGGCGTGTGCTTTGATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGAGTTTAGCAGAGAAGGCGATGGTGGTTTTGAGTAACCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGAGTTGGTGAAAGGGAAAGAATTTGCAGTGTTGACACTCTTAACCCTCGCCGGCGCCGTCAATCCTTTTCTCAATAACATCCATCTCGTCGACGCTTCCGGGGCGGAGTTCGTTTTCGAGGTTAGCTAA

Coding sequence (CDS)

ATGCTACGTGCTGCTTTAGCACATTTTCATGCTGCCCAACAGACCCATGTCGCACTTGCTCAGACCCAGGTCGCTTCTGCCCAGGCCCTAATGGTACCTCAGATCGTGTCAGACCAGCTGTCAGCTGAGGCTAAACATCTGAGGGACTTTAGGAAGTATAATCCTAAAACTTTTGACGAGTCCATGGACAACCCTACCAAGGCCCAGATGTGGTTGACCTCTATAGAGAAATTCTGCAGGTACATGAAATGCCCTAATGACCAGAAGGTGCAGTGTGTAGTTTTCTTCTTGGAAGATAGAGGTATTGCATGGACTGTGGAGCAGTATGATGCCGAGTTCGATATGCTATCCCGTTTTGCCCCTGATGTAGTAAAGGATGAGGAGGCTAGGACTGAGAAGTTTGTTAGAGGTCTTAGACTAGACCTCCAGGGTATCGTTCAAGCCCTCAGGCCAACCACCCATGCTGATGCACTACACCTGGCACTGGACTTGAGTCTGCACGAGAGAGCTGATCCATCCAAGGCTGCAGGCAGAGGGTCAACTCTCGGTCAGAAGAGGAAGGTTGAGTCGCAGATTGCTGTAGCACCGCAACGAAACCTGAGGTCAGGAGGTGTCTTCCAGCGGTATCGTAAGGAGCTTGTTGCAGCAGGAAGAACATTGAGAGAGCTACCTGTTTGTCGTAGATGTGGGAGAGCTCATGGAGGTCGTTTCTTGATAGGGAGCGGAGTTTGCTTCAAGTGCAAGCAACCAGGACATACCGCTGACGCTTGTCCTCAGAAACTCATTGAGACTACCCCGCACCAGCCTCCCGCTTCCCAGCAAGGAAGAGTTTTTGCCATTACACGTCAGGAGGTCGAGCGAGCTGGTACTATGGTGACAGGTACGCTCCCAATCTTGGGGCACTATGCACTTATATTGTTTGATTCTGGGTCATCCCATTCTTTCATATCTTCAGTTTTTGTTCGACAAATGGATTTAGAAGTAGAACCGTTGGGTAGTATACTATCTGTTTCTACCCCATTGGGAGAAGTCATGTTGTCTAAAGATAAGATAAAGGCATGTCAAGTAGAGCCGTGTTTTGCCTCCCTTCAACCCGTGTTTCCGCCTCCCTTCAACCCGTGTTTCTGCCTCCCTTCAACCCGTATTTACGTCTCCCTTCAGACTGTGTCAATCTTCTTCCTTCACTTCCGTCAATATTCTTCCTTCACTTTTGCCTTGTTGAATCTCTCTCTCCATGAGTCTAATAAAGTTATTATCACAAATGCTGGAGCCGTGAAGTCGCTGGTTTATGTGCTCAAAATCGGTACGAAAACTTCGAAACAGAATGCGGCGTGTGCTTTGATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGAGTTTAGCAGAGAAGGCGATGGTGGTTTTGAGTAACCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGAGTTGGTGAAAGGGAAAGAATTTGCAGTGTTGACACTCTTAACCCTCGCCGGCGCCGTCAATCCTTTTCTCAATAACATCCATCTCGTCGACGCTTCCGGGGCGGAGTTCGTTTTCGAGGTTAGCTAA

Protein sequence

MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAWTVEQYDAEFDMLSRFAPDVVKDEEARTEKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGSSHSFISSVFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPCFCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFLNNIHLVDASGAEFVFEVS

Homology

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BLAST of MELO.jh102513.1 vs. NCBI nr
Match: KAA0035911.1 (gag-protease polyprotein [Cucumis melo var. makuwa] >TYK19065.1 gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1005 bits (2599), Expect = 0.0
Identity = 528/557 (94.79%), Postives = 529/557 (94.97%), Query Frame = 0


Query: 15  THVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTS 74
           THVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTS
Sbjct: 94  THVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTS 153

Query: 75  IEKFCRYMKCPNDQKVQCVVFFLEDRGIAWTVEQYDAEFDMLSRFAPDVVKDEEARTEKF 134
           IEKFCRYMKCPNDQKVQCVVFFLEDRG   TVEQYDAEFDMLSRFAPDVVKDEEARTEKF
Sbjct: 154 IEKFCRYMKCPNDQKVQCVVFFLEDRGDR-TVEQYDAEFDMLSRFAPDVVKDEEARTEKF 213

Query: 135 VRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAV 194
           VRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAV
Sbjct: 214 VRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAV 273

Query: 195 APQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTA 254
           APQRNLRSGGVFQRYR+ELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTA
Sbjct: 274 APQRNLRSGGVFQRYRQELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTA 333

Query: 255 DACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGSSHS 314
           DACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVT                     
Sbjct: 334 DACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVT--------------------- 393

Query: 315 FISSVFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPC 374
               VFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPC
Sbjct: 394 ----VFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPC 453

Query: 375 FCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKI 434
           FCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKI
Sbjct: 454 FCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKI 513

Query: 435 GTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLI 494
           GTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLI
Sbjct: 514 GTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLI 573

Query: 495 KPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEA 554
           KPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEA
Sbjct: 574 KPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEA 624

Query: 555 IEDELVKGKEFAVLTLL 571
           IEDELVKGKEFAVLTLL
Sbjct: 634 IEDELVKGKEFAVLTLL 624

[Close]

BLAST of MELO.jh102513.1 vs. NCBI nr
Match: KAA0066906.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1354), Expect = 2.83e-179
Identity = 279/406 (68.72%), Postives = 300/406 (73.89%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q     A    Q V  QLSAEAKHL DFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQTVVPSAPAEAQPVPFQLSAEAKHLWDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRGIAW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGIAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEF+MLSRFAPDVV+DE ART
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGEMTVEQYDAEFNMLSRFAPDVVRDEAART 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADALH+ALDLSLHER D SKAA RG+ LG KRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALHIALDLSLHERVDSSKAASRGTALGHKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             + PQR LRSGGVFQR+R+EL AAGRTLRELP C  CGR HGGR L GSG CF+C+QPG
Sbjct: 293 PDMIPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGFCFRCRQPG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTADACP+K  ETT HQP ASQQGRVFA TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADACPRKPFETTLHQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. NCBI nr
Match: KAA0047852.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 530 bits (1366), Expect = 1.16e-178
Identity = 281/406 (69.21%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q  +  A    Q V  QLSAEAKHLRDFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRG AW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEFDMLSRFAPD+V+DE  RT
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAVRT 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADAL +ALDLSL ERAD SKAAGRGS LGQKRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALRIALDLSLSERADSSKAAGRGSALGQKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             V PQR LRSGGVFQR+R+EL AAGRTLRELP C  CGR HGGR L GSGVCF+C+QPG
Sbjct: 293 PDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTAD CP+K  ETTP QP ASQQGRVFA TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADVCPRKPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. NCBI nr
Match: KAA0040651.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 524 bits (1349), Expect = 3.26e-177
Identity = 278/406 (68.47%), Postives = 301/406 (74.14%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q  +  A    Q V  QLSAEAKHLRDFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRG AW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEFDMLSRFAPD+V+DE ART
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAART 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADAL +ALDLSL ER D SKAAGRGS LGQKRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERDDSSKAAGRGSALGQKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             V PQR LRSGGVFQR+R+EL A+GRTLRELP C  CGR HGGR L GSGVCF+C+Q G
Sbjct: 293 PDVVPQRTLRSGGVFQRHRRELAASGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQSG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTAD CP+K  ETTP QP ASQQGRV+A TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. NCBI nr
Match: KAA0053272.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 531 bits (1369), Expect = 8.50e-177
Identity = 282/406 (69.46%), Postives = 304/406 (74.88%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q  +  A    Q V  QLSAEAKHLRDFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRG AW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEFDMLSRFAPD+V+DE ART
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAART 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADAL +ALDLSL ERAD SKAAGRGS LGQKRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             VAPQR LRSGGVFQR+R+EL AAGRTLRELP C  CGR HGGR L GSGVCF+C+QPG
Sbjct: 293 PDVAPQRTLRSGGVFQRHRQELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTAD CP+K  ETTP QP A+QQGRVFA TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADVCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy Swiss-Prot
Match: O22193 (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-29
Identity = 78/180 (43.33%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           ALLNLS++++NK  I +AGA++ L++VL+ G+  +K+N+A  L SL+++EENK  IG  G
Sbjct: 606 ALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSG 665

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            I PLV LL NG+ R KKDA T L+ L + + N    + + AV+ L+ L+ +    + +K
Sbjct: 666 AIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDK 725

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFLNNI 584
           A+ VL+NLA I EG++ I +EGGI  LVE +E    +GKE A   LL L+     F N +
Sbjct: 726 AVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMV 784

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy Swiss-Prot
Match: Q5XEZ8 (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-28
Identity = 83/180 (46.11%), Postives = 113/180 (62.78%), Query Frame = 0


Query: 406 LLNLSLHESNKVIITNAGAVKSLVYVLKIG-TKTSKQNAACALMSLALLEENKTSIGVCG 465
           LLNLS++++NK +I  +GA+  L++VLK G  + +K N+A  L SL+++EE KT IG  G
Sbjct: 487 LLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAG 546

Query: 466 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 525
            I PLV LL +GS   KKDA T L+ L +   N  + I A AV+ LV L+ +    + EK
Sbjct: 547 AIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEK 606

Query: 526 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFLNNI 585
           A+VVL+NLA ++EGK  I EEGGI  LVE +E    +GKE A   LL L      F NN+
Sbjct: 607 AVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNV 665

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy Swiss-Prot
Match: Q681N2 (U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-26
Identity = 73/176 (41.48%), Postives = 110/176 (62.50%), Query Frame = 0


Query: 406 LLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCGG 465
           LLNLS+ E NK +I+N GA+ +++ +L+ G + +++N+A AL SL++L+ENK +IG+  G
Sbjct: 445 LLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNG 504

Query: 466 IPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEKA 525
           IPPLV LL +G+ R KKDALT L+ L L   N  +AI A  V+PL+ L+ ++   + ++A
Sbjct: 505 IPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEA 564

Query: 526 MVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFL 582
           + +L  LA   EG+  I +   I  LVE I     K KE A   LL L    + F+
Sbjct: 565 LSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFI 620

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy Swiss-Prot
Match: Q9SNC6 (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.7e-26
Identity = 74/185 (40.00%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           ALLNLS+ E+NK  I +AGA+  +V VLK G+  +++NAA  L SL++++ENK +IG  G
Sbjct: 417 ALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALG 476

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            IPPLV LL  G+ R KKDA T L+ LC+ + N  +AI A  +  L  L+ E G+ + ++
Sbjct: 477 AIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDE 536

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFLNNI 584
           A+ +L+ L+   EGK  I     + +LVE I     + +E A   L+ L        +  
Sbjct: 537 ALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSG-----DPQ 596

Query: 585 HLVDA 590
           HLV+A
Sbjct: 597 HLVEA 596

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy Swiss-Prot
Match: Q8VZ40 (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-25
Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           ALLNLS++E NK  I +AGA+  +V VLK G+  +++NAA  L SL++++ENK +IG  G
Sbjct: 410 ALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAG 469

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            I  L+SLL  G+ R KKDA T ++ LC+ + N  +A+    V PL  L+ + G  + ++
Sbjct: 470 AIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDE 529

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTL 571
           A+ +L+ L+  QEGK  I E   I  LVE I     + +E A   L
Sbjct: 530 ALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAIL 575

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy TrEMBL
Match: A0A5D3D6A7 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00240 PE=4 SV=1)

HSP 1 Score: 1005 bits (2599), Expect = 0.0
Identity = 528/557 (94.79%), Postives = 529/557 (94.97%), Query Frame = 0


Query: 15  THVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTS 74
           THVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTS
Sbjct: 94  THVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDESMDNPTKAQMWLTS 153

Query: 75  IEKFCRYMKCPNDQKVQCVVFFLEDRGIAWTVEQYDAEFDMLSRFAPDVVKDEEARTEKF 134
           IEKFCRYMKCPNDQKVQCVVFFLEDRG   TVEQYDAEFDMLSRFAPDVVKDEEARTEKF
Sbjct: 154 IEKFCRYMKCPNDQKVQCVVFFLEDRGDR-TVEQYDAEFDMLSRFAPDVVKDEEARTEKF 213

Query: 135 VRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAV 194
           VRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAV
Sbjct: 214 VRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQIAV 273

Query: 195 APQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTA 254
           APQRNLRSGGVFQRYR+ELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTA
Sbjct: 274 APQRNLRSGGVFQRYRQELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPGHTA 333

Query: 255 DACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGSSHS 314
           DACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVT                     
Sbjct: 334 DACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVT--------------------- 393

Query: 315 FISSVFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPC 374
               VFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPC
Sbjct: 394 ----VFVRQMDLEVEPLGSILSVSTPLGEVMLSKDKIKACQVEPCFASLQPVFPPPFNPC 453

Query: 375 FCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKI 434
           FCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKI
Sbjct: 454 FCLPSTRIYVSLQTVSIFFLHFRQYSSFTFALLNLSLHESNKVIITNAGAVKSLVYVLKI 513

Query: 435 GTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLI 494
           GTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLI
Sbjct: 514 GTKTSKQNAACALMSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLI 573

Query: 495 KPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEA 554
           KPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEA
Sbjct: 574 KPNNEQAITARAVKPLVALVAEQGTSLAEKAMVVLSNLAGIQEGKDTIVEEGGIAALVEA 624

Query: 555 IEDELVKGKEFAVLTLL 571
           IEDELVKGKEFAVLTLL
Sbjct: 634 IEDELVKGKEFAVLTLL 624

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy TrEMBL
Match: A0A5A7VKF7 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00240 PE=4 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 1.37e-179
Identity = 279/406 (68.72%), Postives = 300/406 (73.89%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q     A    Q V  QLSAEAKHL DFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQTVVPSAPAEAQPVPFQLSAEAKHLWDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRGIAW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGIAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEF+MLSRFAPDVV+DE ART
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGEMTVEQYDAEFNMLSRFAPDVVRDEAART 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADALH+ALDLSLHER D SKAA RG+ LG KRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALHIALDLSLHERVDSSKAASRGTALGHKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             + PQR LRSGGVFQR+R+EL AAGRTLRELP C  CGR HGGR L GSG CF+C+QPG
Sbjct: 293 PDMIPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGFCFRCRQPG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTADACP+K  ETT HQP ASQQGRVFA TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADACPRKPFETTLHQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy TrEMBL
Match: A0A5A7TWH3 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001170 PE=4 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 5.61e-179
Identity = 281/406 (69.21%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q  +  A    Q V  QLSAEAKHLRDFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRG AW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEFDMLSRFAPD+V+DE  RT
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAVRT 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADAL +ALDLSL ERAD SKAAGRGS LGQKRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALRIALDLSLSERADSSKAAGRGSALGQKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             V PQR LRSGGVFQR+R+EL AAGRTLRELP C  CGR HGGR L GSGVCF+C+QPG
Sbjct: 293 PDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTAD CP+K  ETTP QP ASQQGRVFA TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADVCPRKPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy TrEMBL
Match: A0A5A7TG66 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00050 PE=4 SV=1)

HSP 1 Score: 524 bits (1349), Expect = 1.58e-177
Identity = 278/406 (68.47%), Postives = 301/406 (74.14%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q  +  A    Q V  QLSAEAKHLRDFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRG AW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEFDMLSRFAPD+V+DE ART
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAART 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADAL +ALDLSL ER D SKAAGRGS LGQKRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERDDSSKAAGRGSALGQKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             V PQR LRSGGVFQR+R+EL A+GRTLRELP C  CGR HGGR L GSGVCF+C+Q G
Sbjct: 293 PDVVPQRTLRSGGVFQRHRRELAASGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQSG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTAD CP+K  ETTP QP ASQQGRV+A TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. ExPASy TrEMBL
Match: A0A5A7UC03 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00700 PE=4 SV=1)

HSP 1 Score: 531 bits (1369), Expect = 4.11e-177
Identity = 282/406 (69.46%), Postives = 304/406 (74.88%), Query Frame = 0


Query: 1   MLRAALAHFHAAQQTHVALAQTQVASAQALMVPQIVSDQLSAEAKHLRDFRKYNPKTFDE 60
           ML+AALA F AAQQ   A  Q Q  +  A    Q V  QLSAEAKHLRDFRKYNPKTFD 
Sbjct: 53  MLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDG 112

Query: 61  SMDNPTKAQMWLTSIEKFCRYMKCPNDQKVQCVVFFLEDRGIAW---------------- 120
           SMDNPTKAQMWLTSIE   RYMKCP DQKVQC VFFLEDRG AW                
Sbjct: 113 SMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKIT 172

Query: 121 ---------------------------------TVEQYDAEFDMLSRFAPDVVKDEEART 180
                                            TVEQYDAEFDMLSRFAPD+V+DE ART
Sbjct: 173 WEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAART 232

Query: 181 EKFVRGLRLDLQGIVQALRPTTHADALHLALDLSLHERADPSKAAGRGSTLGQKRKVESQ 240
           EKFVRGLRLDLQGIV+ALRP THADAL +ALDLSL ERAD SKAAGRGS LGQKRKVE+Q
Sbjct: 233 EKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQ 292

Query: 241 IAVAPQRNLRSGGVFQRYRKELVAAGRTLRELPVCRRCGRAHGGRFLIGSGVCFKCKQPG 300
             VAPQR LRSGGVFQR+R+EL AAGRTLRELP C  CGR HGGR L GSGVCF+C+QPG
Sbjct: 293 PDVAPQRTLRSGGVFQRHRQELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPG 352

Query: 301 HTADACPQKLIETTPHQPPASQQGRVFAITRQEVERAGTMVTGTLPILGHYALILFDSGS 357
           HTAD CP+K  ETTP QP A+QQGRVFA TRQE ERAGT+VTGTLPILGHYA +LFDSGS
Sbjct: 353 HTADVCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGS 412

[Close]

BLAST of MELO.jh102513.1 vs. TAIR 10
Match: AT4G16490.1 (ARM repeat superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 3.9e-63
Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           ALLNLSLH+ NK +I   GA+KSLV+VLK GT+TSKQNAACAL+SLALLEENK SIG CG
Sbjct: 248 ALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACG 307

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            IPPLVSLLLNGS R KKDALTTLYKLC ++ N E+A+TA AVKPLV LVAE+GT +AEK
Sbjct: 308 AIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEK 367

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTL 574
           AMVVLS+LA I +GK+ IVEEGGIAALVEAIED  VKGKEFA+LTLL L
Sbjct: 368 AMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQL 416

[Close]

BLAST of MELO.jh102513.1 vs. TAIR 10
Match: AT3G01400.1 (ARM repeat superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-34
Identity = 84/169 (49.70%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           A+LNLSL + NK  I ++GA+K LV  LK+GT T+K+NAACAL+ L+ +EENK +IG  G
Sbjct: 128 AILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSG 187

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            IP LV+LL  G  R KKDA T LY LC  K N  +A+ +  +KPLV L+A+ G+++ +K
Sbjct: 188 AIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDK 247

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTL 574
           +  V+S L  + E K  IVEEGG+  LVE +E    + KE AV  LL L
Sbjct: 248 SAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQL 296

[Close]

BLAST of MELO.jh102513.1 vs. TAIR 10
Match: AT5G58680.1 (ARM repeat superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 4.6e-32
Identity = 79/169 (46.75%), Postives = 110/169 (65.09%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           A+LNLSL + NK +I ++GAVK LV  L++GT T+K+NAACAL+ L+ +EENK +IG  G
Sbjct: 126 AVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSG 185

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            IP LV+LL NG  R KKDA T LY LC    N  +A+ +  +KPLV L+ +  + + +K
Sbjct: 186 AIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDK 245

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTL 574
           +  V++ L    E K  +VEEGG+  LVE +E    + KE +V  LL L
Sbjct: 246 SAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQL 294

[Close]

BLAST of MELO.jh102513.1 vs. TAIR 10
Match: AT2G23140.1 (RING/U-box superfamily protein with ARM repeat domain )

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-30
Identity = 78/180 (43.33%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           ALLNLS++++NK  I +AGA++ L++VL+ G+  +K+N+A  L SL+++EENK  IG  G
Sbjct: 609 ALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSG 668

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            I PLV LL NG+ R KKDA T L+ L + + N    + + AV+ L+ L+ +    + +K
Sbjct: 669 AIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDK 728

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFLNNI 584
           A+ VL+NLA I EG++ I +EGGI  LVE +E    +GKE A   LL L+     F N +
Sbjct: 729 AVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMV 787

[Close]

BLAST of MELO.jh102513.1 vs. TAIR 10
Match: AT2G23140.2 (RING/U-box superfamily protein with ARM repeat domain )

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-30
Identity = 78/180 (43.33%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 405 ALLNLSLHESNKVIITNAGAVKSLVYVLKIGTKTSKQNAACALMSLALLEENKTSIGVCG 464
           ALLNLS++++NK  I +AGA++ L++VL+ G+  +K+N+A  L SL+++EENK  IG  G
Sbjct: 606 ALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSG 665

Query: 465 GIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTSLAEK 524
            I PLV LL NG+ R KKDA T L+ L + + N    + + AV+ L+ L+ +    + +K
Sbjct: 666 AIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDK 725

Query: 525 AMVVLSNLAGIQEGKDTIVEEGGIAALVEAIEDELVKGKEFAVLTLLTLAGAVNPFLNNI 584
           A+ VL+NLA I EG++ I +EGGI  LVE +E    +GKE A   LL L+     F N +
Sbjct: 726 AVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMV 784

The following BLAST results are available for this feature:

BLAST of MELO.jh102513.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035911.1	0.0	94.79	gag-protease polyprotein [Cucumis melo var. makuwa] >TYK19065.1 gag-protease pol...	[more]
KAA0066906.1	2.83e-179	68.72	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0047852.1	1.16e-178	69.21	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0040651.1	3.26e-177	68.47	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0053272.1	8.50e-177	69.46	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102513.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22193	2.1e-29	43.33	U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 S...	[more]
Q5XEZ8	1.0e-28	46.11	U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 S...	[more]
Q681N2	1.3e-26	41.48	U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2...	[more]
Q9SNC6	3.7e-26	40.00	U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1...	[more]
Q8VZ40	1.1e-25	40.96	U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1...	[more]

BLAST of MELO.jh102513.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D6A7	0.0	94.79	Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7VKF7	1.37e-179	68.72	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7TWH3	5.61e-179	69.21	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7TG66	1.58e-177	68.47	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7UC03	4.11e-177	69.46	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of MELO.jh102513.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16490.1	3.9e-63	76.92	ARM repeat superfamily protein	[more]
AT3G01400.1	1.3e-34	49.70	ARM repeat superfamily protein	[more]
AT5G58680.1	4.6e-32	46.75	ARM repeat superfamily protein	[more]
AT2G23140.1	1.5e-30	43.33	RING/U-box superfamily protein with ARM repeat domain	[more]
AT2G23140.2	1.5e-30	43.33	RING/U-box superfamily protein with ARM repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 243..259 e-value: 0.0012 score: 28.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 243..259 e-value: 1.7E-4 score: 21.5
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 244..259 score: 9.454925
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 453..493 e-value: 5.7 score: 15.1 coord: 535..575 e-value: 120.0 score: 4.8 coord: 495..534 e-value: 46.0 score: 8.1 coord: 412..452 e-value: 92.0 score: 5.8
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 505..547 score: 10.0274
None	No IPR available	GENE3D	4.10.60.10		coord: 239..270 e-value: 2.2E-5 score: 26.0
None	No IPR available	PFAM	PF08284	RVP_2	coord: 273..357 e-value: 3.7E-20 score: 72.1
None	No IPR available	PANTHER	PTHR23315:SF304	U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE	coord: 404..574
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 404..574
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 399..589 e-value: 2.2E-26 score: 94.3
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 230..260
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 404..580

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102513.1.t1	MELO.jh102513.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding