MELO.jh102403.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102403.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr09: 20190834 .. 20194075 (+)
RNA-Seq Expression	MELO.jh102403.1
Synteny	MELO.jh102403.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGCCATAAGCCGTGCCACATCCGATAATTGCCCCATAAAACCACCTCGACCTCGCAACTATTCTACCAGAGCAAAGAACTTTACTAAACCCAAGAACTCCTCGCTATCGTTGCTCCGGATAAATCCACCATCCCCAGTCCAGATAAGTGATCTTCAAAGCTTACTAAATCGCTTGATTTCATCACCTTCTCGCACTTGCCGTCTCACCATAATCGATGGCTTCTTGACTCGGGTCGTTGCAATCATATGACATCCGATTACTCTCTTATGAACACTCCTAGTCCTACTAAATCTTTACCTCCCATCTATGCCGACGGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCTAGTTTGAATCTTCCTCACACTTACCGTGTCCCAAACTTAACTTTTAATCTAGTATCCGTTGGTCAATTATGCGACCTTGGCTTCATCTCTTTTCTTCCAATGGTTGTCGTTCGGGATCCACGACGGACAGACGATTGACGGGTCGCAAAGGGGCGATTGTTTGAGCTTCTATCACTTCAGTTCCTTCTCCATCCATCTCCGCTCGTCACCGACTGACACGCTGGCATCTTCTCTTGGTCATGCTTCTCCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCATTTTCTACATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGCCCCTACCTCCACCGTCCATGGTTATCGTTATTATGTGTTATTCATCGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAATTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAACGCTCATGCCCCCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCAGCCTCATGAACACACTAAACTTGAACCTCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAACAGACTTCGTATATCCCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGCTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCCCAATCTTTCTTCACTGACACATCCATTGATCTTTTCCCTCTCTCTGAGTCCACTCCTGGTAATGAGCTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGTGTTATAAGGCTCGGCTTGTAGCAAAAGGGTATTCCCAAGAGTATGGCATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTGTACGTAGTTTACTAGCTGTTGCTGCTGCCAAGCAGTGGCCCCTTCTTCAAATGGATGTCAAAAATGCTTTCTTAATGGGACTCTTTCTGAAGAAGTATATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGGTATTGTACTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCGACGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAGCACAGCTTCAACGCCGTTAGATCCCAATGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAAATGTCAGCCTGTATCGACAACTCGTTGGCAGCCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTTCGTATCCTTCGCTATGTCAAAGGAACCTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCCGATGCAGATTGGGCTGGGGATCCCACTGGTCGGCGTTCTACAACCGGTTACTGCTTTTACTTAGGTGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTACCGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGACAATCGTAGTGCCATCCAAATTGCTCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATCCGTCATCATCTCCTGAGCCACACACTTCTTCTGCAATCTATCTCCACCACTGAACAACCAGCCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGCTGACAGCTACTCTACCACCTTGA

mRNA sequence

ATGCACGCCATAAGCCGTGCCACATCCGATAATTGCCCCATAAAACCACCTCGACCTCGCAACTATTCTACCAGAGCAAAGAACTTTACTAAACCCAAGAACTCCTCGCTATCGTTGCTCCGGATAAATCCACCATCCCCAGTCCAGATAAGTGATCTTCAAAGCTTACTAAATCGCTTGATTTCATCACCTTCTCGCACTTGCCGTCTCACCATAATCGATGGCTTCTTGACTCGGTATCCGTTGGTCAATTATGCGACCTTGGCTTCATCTCTTTTCTTCCAATGGTTGTCGTTCGGGATCCACGACGGACAGACGATTGACGGGTCGCAAAGGGGCGATTGTTTGAGCTTCTATCACTTCAGTTCCTTCTCCATCCATCTCCGCTCGTCACCGACTGACACGCTGGCATCTTCTCTTGGTCATGCTTCTCCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCATTTTCTACATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGCCCCTACCTCCACCGTCCATGGTTATCGTTATTATGTGTTATTCATCGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAATTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAACGCTCATGCCCCCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCAGCCTCATGAACACACTAAACTTGAACCTCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAACAGACTTCGTATATCCCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGCTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCCCAATCTTTCTTCACTGACACATCCATTGATCTTTTCCCTCTCTCTGAGTCCACTCCTGGTAATGAGCTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGTGTTATAAGGCTCGGCTTGTAGCAAAAGGGTATTCCCAAGAGTATGGCATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTGTACAAGTATATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGGTATTGTACTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCGACGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAGCACAGCTTCAACGCCGTTAGATCCCAATGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAAATGTCAGCCTGTATCGACAACTCGTTGGCAGCCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTTCGTATCCTTCGCTATGTCAAAGGAACCTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCCGATGCAGATTGGGCTGGGGATCCCACTGGTCGGCGTTCTACAACCGGTTACTGCTTTTACTTAGGTGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTACCGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGACAATCGTAGTGCCATCCAAATTGCTCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATCCGTCATCATCTCCTGAGCCACACACTTCTTCTGCAATCTATCTCCACCACTGAACAACCAGCCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGCTGACAGCTACTCTACCACCTTGA

Coding sequence (CDS)

ATGCACGCCATAAGCCGTGCCACATCCGATAATTGCCCCATAAAACCACCTCGACCTCGCAACTATTCTACCAGAGCAAAGAACTTTACTAAACCCAAGAACTCCTCGCTATCGTTGCTCCGGATAAATCCACCATCCCCAGTCCAGATAAGTGATCTTCAAAGCTTACTAAATCGCTTGATTTCATCACCTTCTCGCACTTGCCGTCTCACCATAATCGATGGCTTCTTGACTCGGTATCCGTTGGTCAATTATGCGACCTTGGCTTCATCTCTTTTCTTCCAATGGTTGTCGTTCGGGATCCACGACGGACAGACGATTGACGGGTCGCAAAGGGGCGATTGTTTGAGCTTCTATCACTTCAGTTCCTTCTCCATCCATCTCCGCTCGTCACCGACTGACACGCTGGCATCTTCTCTTGGTCATGCTTCTCCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCATTTTCTACATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGCCCCTACCTCCACCGTCCATGGTTATCGTTATTATGTGTTATTCATCGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAATTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAACGCTCATGCCCCCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCAGCCTCATGAACACACTAAACTTGAACCTCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAACAGACTTCGTATATCCCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGCTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCCCAATCTTTCTTCACTGACACATCCATTGATCTTTTCCCTCTCTCTGAGTCCACTCCTGGTAATGAGCTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGTGTTATAAGGCTCGGCTTGTAGCAAAAGGGTATTCCCAAGAGTATGGCATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTGTACAAGTATATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGGTATTGTACTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCGACGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAGCACAGCTTCAACGCCGTTAGATCCCAATGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAAATGTCAGCCTGTATCGACAACTCGTTGGCAGCCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTTCGTATCCTTCGCTATGTCAAAGGAACCTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCCGATGCAGATTGGGCTGGGGATCCCACTGGTCGGCGTTCTACAACCGGTTACTGCTTTTACTTAGGTGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTACCGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGACAATCGTAGTGCCATCCAAATTGCTCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATCCGTCATCATCTCCTGAGCCACACACTTCTTCTGCAATCTATCTCCACCACTGAACAACCAGCCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGCTGACAGCTACTCTACCACCTTGA

Protein sequence

MHAISRATSDNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPSPVQISDLQSLLNRLISSPSRTCRLTIIDGFLTRYPLVNYATLASSLFFQWLSFGIHDGQTIDGSQRGDCLSFYHFSSFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVQVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLPP

Homology

[Close]

BLAST of MELO.jh102403.1 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1754 bits (4542), Expect = 0.0
Identity = 912/1083 (84.21%), Postives = 932/1083 (86.06%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + + ++  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVALDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRG---DCLSF 189
                       F  +S G                 + D   GQTI  G + G   + LS 
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSL 431

Query: 190  YHFS-SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
               S S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1752 bits (4538), Expect = 0.0
Identity = 909/1083 (83.93%), Postives = 927/1083 (85.60%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +  +  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                       F  +S G                 + D   GQTI  G + G        
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 431

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1751 bits (4534), Expect = 0.0
Identity = 908/1083 (83.84%), Postives = 927/1083 (85.60%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +  +  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                       F  +S G                 + D   GQTI  G + G        
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 431

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. NCBI nr
Match: TYK21532.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1711 bits (4432), Expect = 0.0
Identity = 887/1083 (81.90%), Postives = 911/1083 (84.12%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRI-NPPSP-VQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +   N  +P  QISDLQSLLN+LISSPS  
Sbjct: 92   DNCPIKPPRPRNYSTRAKNFTKPNNSSAATVAPDNSTTPQFQISDLQSLLNQLISSPSSA 151

Query: 70   CRLT-----IIDGFLTRYPLVNYATLAS-------------------------------- 129
              ++     ++D     +   NY+ + +                                
Sbjct: 152  LAVSPGNRWLLDSGCCNHMTSNYSLMNTPSPTKSLPPIYAADGNCMNITHTGTINTPSLN 211

Query: 130  --------SLFFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                    +L F  +S G                 + D   GQTI  G + G        
Sbjct: 212  LPHTYCVPNLTFNLVSVGQLCDLRLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 271

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 272  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 331

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFS STSICDKPFDLIHSDIWGPAPT+TVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 332  ALSFSKSTSICDKPFDLIHSDIWGPAPTTTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 391

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
             TYIEFANMIRTQFSCPIKTLRTDN+ EYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 392  HTYIEFANMIRTQFSCPIKTLRTDNSFEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 451

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKH HILDSVRALLLSASCPEKFWGEAALTSVYTINRLPS VLQNISPFE+LYGTPPNYS
Sbjct: 452  RKHHHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSFVLQNISPFEKLYGTPPNYS 511

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLL PHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 512  NLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 571

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFH SFSSPQSFFTDTSIDLFPL ESTP NELAQSAPTSATSDQSSISDGNP
Sbjct: 572  HTMFSRLSSFHTSFSSPQSFFTDTSIDLFPLPESTPDNELAQSAPTSATSDQSSISDGNP 631

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DP PDIPPRRSTRVR PP HLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 632  DPSPDIPPRRSTRVRAPPSHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 691

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            K HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQE+GIDYEETFAPV
Sbjct: 692  KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEFGIDYEETFAPV 751

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 752  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 811

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDP A
Sbjct: 812  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQA 871

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 872  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 931

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 932  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 991

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 992  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1051

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1052 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1111

[Close]

BLAST of MELO.jh102403.1 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1694 bits (4386), Expect = 0.0
Identity = 885/1083 (81.72%), Postives = 903/1083 (83.38%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +  +  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                       F  +S G                 + D   GQTI  G + G        
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 431

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHI               
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHI--------------- 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
                     GTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 ---------GTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.6e-167
Identity = 389/1051 (37.01%), Postives = 539/1051 (51.28%), Query Frame = 0


Query: 98   SFGIHDGQT----IDGSQRGDCLSFYHFSSFSIHLRSSPTDTLASS-----LGHASPEKL 157
            SF + D  T    + G  + +   +   SS  + L +SP+     S     LGH +P  L
Sbjct: 420  SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479

Query: 158  RHLI---SINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPT 217
              +I   S++ LN   KF+  +C +C + K   + FS ST    +P + I+SD+W  +P 
Sbjct: 480  NSVISNYSLSVLNPSHKFL--SCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPI 539

Query: 218  STVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALE 277
             +   YRYYV+F+D F+R+TW+Y LK +S++  T+I F N++  +F   I T  +DN  E
Sbjct: 540  LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGE 599

Query: 278  YKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAA 337
            +    L  + SQ G     S PHT + NG +ERKHRHI+++   LL  AS P+ +W  A 
Sbjct: 600  F--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 659

Query: 338  LTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLC 397
              +VY INRLP+ +LQ  SPF++L+GT PNY  L+VFGCAC+  L+P+   KL+ ++R C
Sbjct: 660  AVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQC 719

Query: 398  CFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE---------------------------- 457
             FLGY      + C    ++RL ISRHV F E                            
Sbjct: 720  VFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSP 779

Query: 458  HTMF------------------------------------SRL-SSFHASFSS------- 517
            HT                                      S L SSF +SF S       
Sbjct: 780  HTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAP 839

Query: 518  ------PQSFFTDTSIDLFP---LSESTPGNE----LAQSAPTSATSDQS--------SI 577
                  P +  T T          S++ P NE    LAQS  T A S  S        S 
Sbjct: 840  RQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASS 899

Query: 578  SDGNPDPPPDI--PPRRSTRV----REPPIH------------LQDYHCFSTIVSLI--- 637
            S  +P PP  +  PP    ++     + P++            ++    +S  VSL    
Sbjct: 900  SSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAES 959

Query: 638  EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTI 697
            EP +  +A  D  W+ AM  E+ A    HTWD V  PP    I GC+WI+  K +SDG++
Sbjct: 960  EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1019

Query: 698  ECYKARLVAKGYSQEYGIDYEETFAPVARMTSVQ-------------------------- 757
              YKARLVAKGY+Q  G+DY ETF+PV + TS++                          
Sbjct: 1020 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1079

Query: 758  ----VYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTA 817
                VYM  PPG      P+ VC LR+ALYGLKQAPRAW+    + +  +GF +S  DT+
Sbjct: 1080 LTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTS 1139

Query: 818  LFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRR 877
            LF     + IV +L+YVDD++ITGNDP  + +    L Q F +KD   L+YFLG+E  R 
Sbjct: 1140 LFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRV 1199

Query: 878  SDGYLLSQAKYASDLLARSGITDSSTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIY 937
              G  LSQ +Y  DLLAR+ +  +   +TP+ P+  L+ Y G  L + + YR +VGSL Y
Sbjct: 1200 PTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQY 1259

Query: 938  LTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSD 990
            L  TRPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  YSD
Sbjct: 1260 LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1319

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.2e-161
Identity = 376/1094 (34.37%), Postives = 548/1094 (50.09%), Query Frame = 0


Query: 57   LNRLISSPSRTCRLTIIDGFLTRYPLVNYATLASSLFFQWLSFGIHDGQT----IDGSQR 116
            LN+++  P+      I    ++ Y L N  T   S+ F   SF + D  T    + G  +
Sbjct: 366  LNKVLYVPN------IHKNLISVYRLCN--TNRVSVEFFPASFQVKDLNTGVPLLQGKTK 425

Query: 117  GDCLSFYHFSSFSIHLRSSPTDTLA-----SSLGHASPEKLRHLISINNLNSIT-KFVPF 176
             +   +   SS ++ + +SP          S LGH S   L  +IS ++L  +       
Sbjct: 426  DELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLL 485

Query: 177  NCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTW 236
            +C +C + K   + FS ST    KP + I+SD+W  +P  ++  YRYYV+F+D F+R+TW
Sbjct: 486  SCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTW 545

Query: 237  IYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC 296
            +Y LK +S++  T+I F +++  +F   I TL +DN  E+    L  +LSQ G     S 
Sbjct: 546  LYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSP 605

Query: 297  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPF 356
            PHT + NG +ERKHRHI++    LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF
Sbjct: 606  PHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPF 665

Query: 357  ERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNR 416
            ++L+G PPNY  LKVFGCAC+  L+P+   KLE +++ C F+GY      + C    + R
Sbjct: 666  QKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGR 725

Query: 417  LRISRHVTFWEHTMFSRLSSFHASFSSPQ------SFFTDTSIDLFPL------------ 476
            L  SRHV F E       ++F  S S  Q      ++ + T++   PL            
Sbjct: 726  LYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHL 785

Query: 477  -------------------SESTPGNEL---AQSAPT-----------------SATSDQ 536
                               S + P + +   + S PT                 ++ S+ 
Sbjct: 786  DTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNS 845

Query: 537  SSISDGNPD-PPPDIP----------------PRRSTRVREP------------------ 596
              +++ NP+ P P+ P                P  ST + EP                  
Sbjct: 846  PILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLP 905

Query: 597  -----------PIHL---------------QDYHCFSTIVSLIEPTSYQEASTDPLWQKA 656
                       P++                Q Y   +++ +  EP +  +A  D  W++A
Sbjct: 906  APPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQA 965

Query: 657  MNDELQALEKMHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIECYKARLVAKGYSQEYG 716
            M  E+ A    HTWD V  PP    I GC+WI+  K +SDG++  YKARLVAKGY+Q  G
Sbjct: 966  MGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPG 1025

Query: 717  IDYEETFAPVARMTSV------------------------------QVYMKPPPG--TSS 776
            +DY ETF+PV + TS+                              +VYM  PPG     
Sbjct: 1026 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKD 1085

Query: 777  PPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYV 836
             P  VC LR+A+YGLKQAPRAW+    + +  +GF +S  DT+LF     + I+ +L+YV
Sbjct: 1086 RPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYV 1145

Query: 837  DDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLA 896
            DD++ITGND   +      L Q F +K+   L+YFLG+E  R   G  LSQ +Y  DLLA
Sbjct: 1146 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLA 1205

Query: 897  RSGITDSSTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQ 956
            R+ +  +   +TP+  +  LT + G  L + + YR +VGSL YL  TRPD++YAV+ +SQ
Sbjct: 1206 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQ 1265

Query: 957  FMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYC 990
            +M  P   H+ A+ R+LRY+ GT  HG+     ++L L  YSDADWAGD     ST GY 
Sbjct: 1266 YMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYI 1325

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-136
Identity = 320/896 (35.71%), Postives = 474/896 (52.90%), Query Frame = 0


Query: 140  LGHASPEKLRHLISINNLNSITKFVPFN-CLNCKLAKQPALSFSTSTSICDKPFDLIHSD 199
            +GH S EK   +++  +L S  K      C  C   KQ  +SF TS+       DL++SD
Sbjct: 429  MGHMS-EKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSD 488

Query: 200  IWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTL 259
            + GP    ++ G +Y+V FIDD SR  W+Y LK + ++ + + +F  ++  +    +K L
Sbjct: 489  VCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRL 548

Query: 260  RTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPE 319
            R+DN  EY       + S  G   +++ P T Q NG AER +R I++ VR++L  A  P+
Sbjct: 549  RSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPK 608

Query: 320  KFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKL 379
             FWGEA  T+ Y INR PS  L    P         +YS+LKVFGC  F  +   + TKL
Sbjct: 609  SFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKL 668

Query: 380  EPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS-SFHASFSSPQSF 439
            + ++  C F+GYG E  G+R WDP+  ++  SR V F E  + +    S         +F
Sbjct: 669  DDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNF 728

Query: 440  FTDTSIDLFPLSESTPGNELAQSA--PTSATSDQSSISDG-------NPDPPPDIPPRRS 499
             T  S    P S  +  +E+++    P         + +G               P RRS
Sbjct: 729  VTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRS 788

Query: 500  TRVREPPIHLQDYHCFSTIVSLI----EPTSYQEASTDP---LWQKAMNDELQALEKMHT 559
             R   P +  + Y   ST   LI    EP S +E  + P      KAM +E+++L+K  T
Sbjct: 789  ER---PRVESRRYP--STEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGT 848

Query: 560  WDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMT 619
            +  V+LP GKRP+ CKW++K+K   D  +  YKARLV KG+ Q+ GID++E F+PV +MT
Sbjct: 849  YKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMT 908

Query: 620  SV------------------------------QVYMKPPPG--TSSPPHKVCLLRRALYG 679
            S+                              ++YM+ P G   +   H VC L ++LYG
Sbjct: 909  SIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYG 968

Query: 680  LKQAPRAWFATFSSTITQLGFTSSPHDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPHAI 739
            LKQAPR W+  F S +    +  +  D  + F R +    ++LLLYVDDM+I G D   I
Sbjct: 969  LKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLI 1028

Query: 740  SDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYASDLLARSGITDSSTAS 799
            + L+  L + F+MKDLG     LG+++   R S    LSQ KY   +L R  + ++   S
Sbjct: 1029 AKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVS 1088

Query: 800  TPLDPNVHLT----PYDGVPLENVSL--YRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAA 859
            TPL  ++ L+    P       N++   Y   VGSL+Y  V TRPDIA+AV +VS+F+  
Sbjct: 1089 TPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLEN 1148

Query: 860  PRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLG 919
            P   H+ AV  ILRY++GT G  L F   S  +L GY+DAD AGD   R+S+TGY F   
Sbjct: 1149 PGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFS 1208

Query: 920  DSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSA 976
               ISW+SK Q  V+ S+TE+EY A  +   E++WL+  L ++G+ Q+   +++CD++SA
Sbjct: 1209 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDSQSA 1268

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 413.3 bits (1061), Expect = 7.7e-114
Identity = 297/1008 (29.46%), Postives = 480/1008 (47.62%), Query Frame = 0


Query: 120  HFSSFSIHLRSSPTDTL-ASSLGHASPEKL-----RHLIS----INNLNSITKFVPFNCL 179
            +F ++SI+ +      L     GH S  KL     +++ S    +NNL  ++  +   CL
Sbjct: 401  NFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPCL 460

Query: 180  NCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYF 239
            N K A+ P       T I  +P  ++HSD+ GP    T+    Y+V+F+D F+ +   Y 
Sbjct: 461  NGKQARLPFKQLKDKTHI-KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYL 520

Query: 240  LKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHT 299
            +K++S++   + +F       F+  +  L  DN  EY  + +  F  ++G     + PHT
Sbjct: 521  IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 580

Query: 300  SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNIS--PFE 359
             Q NG +ER  R I +  R ++  A   + FWGEA LT+ Y INR+PS  L + S  P+E
Sbjct: 581  PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 640

Query: 360  RLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRL 419
              +   P   +L+VFG   +V ++ ++  K + ++    F+GY  E  GF+ WD ++ + 
Sbjct: 641  MWHNKKPYLKHLRVFGATVYVHIK-NKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKF 700

Query: 420  RISRHVTFWEHTMF-SRLSSFHASF----------------------------------- 479
             ++R V   E  M  SR   F   F                                   
Sbjct: 701  IVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQ 760

Query: 480  -------SSPQSFFTDTSIDL---FP-----------LSESTPGNELAQSAPTSATSD-- 539
                   S  ++F  D+   +   FP           L +S   N+   +       D  
Sbjct: 761  FLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDH 820

Query: 540  -QSSISDGNP-----------------DPPP-----DIPPRRSTRVREPP---------- 599
               S   GNP                 D P      +I  RRS R++  P          
Sbjct: 821  LNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNS 880

Query: 600  ---IHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKR 659
               + L  +  F+ + +  +   Y++  +   W++A+N EL A +  +TW     P  K 
Sbjct: 881  LNKVVLNAHTIFNDVPNSFDEIQYRDDKSS--WEEAINTELNAHKINNTWTITKRPENKN 940

Query: 660  PIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSV--------- 719
             +  +W++ +K +  G    YKARLVA+G++Q+Y IDYEETFAPVAR++S          
Sbjct: 941  IVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQ 1000

Query: 720  ---------------------QVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFS 779
                                 ++YM+ P G S     VC L +A+YGLKQA R WF  F 
Sbjct: 1001 YNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFE 1060

Query: 780  STITQLGFTSSPHDTALF--TRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFE 839
              + +  F +S  D  ++   +      + +LLYVDD++I   D   +++ + YL + F 
Sbjct: 1061 QALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFR 1120

Query: 840  MKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTASTPLDPNVHLTPYDG 899
            M DL  + +F+G+ +  + D   LSQ+ Y   +L++  + + +  STPL   ++    + 
Sbjct: 1121 MTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS 1180

Query: 900  VPLENVSLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTL 959
                N    R L+G L+Y+ + TRPD+  AV+I+S++ +   +  +  + R+LRY+KGT+
Sbjct: 1181 DEDCNTPC-RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTI 1240

Query: 960  GHGLQFSSQSSL--VLSGYSDADWAGDPTGRRSTTGYCFYLGD-SLISWRSKKQSVVSRS 985
               L F    +    + GY D+DWAG    R+STTGY F + D +LI W +K+Q+ V+ S
Sbjct: 1241 DMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAAS 1300

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-49
Identity = 106/224 (47.32%), Postives = 144/224 (64.29%), Query Frame = 0


Query: 671 LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYA 730
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 731 SDLLARSGITDSSTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAV 790
             +L  +G+ D    STPL   ++ +        + S +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 791 HIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRS 850
           +IV Q M  P    F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 851 TTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLW 895
           TTG+C +LG ++ISW +K+Q  VSRSSTE+EYRALA   AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 1754 bits (4542), Expect = 0.0
Identity = 912/1083 (84.21%), Postives = 932/1083 (86.06%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + + ++  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVALDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRG---DCLSF 189
                       F  +S G                 + D   GQTI  G + G   + LS 
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSL 431

Query: 190  YHFS-SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
               S S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 1752 bits (4538), Expect = 0.0
Identity = 909/1083 (83.93%), Postives = 927/1083 (85.60%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +  +  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                       F  +S G                 + D   GQTI  G + G        
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 431

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 1751 bits (4534), Expect = 0.0
Identity = 908/1083 (83.84%), Postives = 927/1083 (85.60%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +  +  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                       F  +S G                 + D   GQTI  G + G        
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 431

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy TrEMBL
Match: A0A5D3DD70 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00150 PE=4 SV=1)

HSP 1 Score: 1711 bits (4432), Expect = 0.0
Identity = 887/1083 (81.90%), Postives = 911/1083 (84.12%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRI-NPPSP-VQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +   N  +P  QISDLQSLLN+LISSPS  
Sbjct: 92   DNCPIKPPRPRNYSTRAKNFTKPNNSSAATVAPDNSTTPQFQISDLQSLLNQLISSPSSA 151

Query: 70   CRLT-----IIDGFLTRYPLVNYATLAS-------------------------------- 129
              ++     ++D     +   NY+ + +                                
Sbjct: 152  LAVSPGNRWLLDSGCCNHMTSNYSLMNTPSPTKSLPPIYAADGNCMNITHTGTINTPSLN 211

Query: 130  --------SLFFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                    +L F  +S G                 + D   GQTI  G + G        
Sbjct: 212  LPHTYCVPNLTFNLVSVGQLCDLRLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 271

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 272  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 331

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFS STSICDKPFDLIHSDIWGPAPT+TVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 332  ALSFSKSTSICDKPFDLIHSDIWGPAPTTTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 391

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
             TYIEFANMIRTQFSCPIKTLRTDN+ EYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 392  HTYIEFANMIRTQFSCPIKTLRTDNSFEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 451

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKH HILDSVRALLLSASCPEKFWGEAALTSVYTINRLPS VLQNISPFE+LYGTPPNYS
Sbjct: 452  RKHHHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSFVLQNISPFEKLYGTPPNYS 511

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLL PHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 512  NLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 571

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFH SFSSPQSFFTDTSIDLFPL ESTP NELAQSAPTSATSDQSSISDGNP
Sbjct: 572  HTMFSRLSSFHTSFSSPQSFFTDTSIDLFPLPESTPDNELAQSAPTSATSDQSSISDGNP 631

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DP PDIPPRRSTRVR PP HLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 632  DPSPDIPPRRSTRVRAPPSHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 691

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            K HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQE+GIDYEETFAPV
Sbjct: 692  KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEFGIDYEETFAPV 751

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 752  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 811

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDP A
Sbjct: 812  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQA 871

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 872  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 931

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
Sbjct: 932  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 991

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
            VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 992  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1051

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1052 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1111

[Close]

BLAST of MELO.jh102403.1 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 1694 bits (4386), Expect = 0.0
Identity = 885/1083 (81.72%), Postives = 903/1083 (83.38%), Query Frame = 0


Query: 10   DNCPIKPPRPRNYSTRAKNFTKPKNSSLSLLRINPPS--PVQISDLQSLLNRLISSPSRT 69
            DNCPIKPPRPRNYSTRAKNFTKP NSS + +  +  +    QISDLQSLLN+LISSPS  
Sbjct: 252  DNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSA 311

Query: 70   CRLT-----IIDG-----FLTRYPLVNYATLASSL------------------------- 129
              ++     ++D        + Y L+N  +   SL                         
Sbjct: 312  LAVSPGNRWLLDSGCCNHMTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 371

Query: 130  ----------FFQWLSFG-----------------IHD---GQTID-GSQRGDCLSFYHF 189
                       F  +S G                 + D   GQTI  G + G        
Sbjct: 372  LPHTYCVPNLTFNLVSVGQLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSL 431

Query: 190  S----SFSIHLRSSPTDTLASSLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 249
                 S S  +  S T      LGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP
Sbjct: 432  QVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQP 491

Query: 250  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 309
            ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS
Sbjct: 492  ALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELS 551

Query: 310  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 369
            RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE
Sbjct: 552  RTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAE 611

Query: 370  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 429
            RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS
Sbjct: 612  RKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYS 671

Query: 430  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 489
            NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE
Sbjct: 672  NLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE 731

Query: 490  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 549
            HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP
Sbjct: 732  HTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNP 791

Query: 550  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 609
            DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE
Sbjct: 792  DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE 851

Query: 610  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPV 669
            KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAPV
Sbjct: 852  KMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPV 911

Query: 670  ARMTSV------------------------------QVYMKPPPGTSSPPHKVCLLRRAL 729
            ARMTSV                              +VYMKPPPGTSSPPHKVCLLRRAL
Sbjct: 912  ARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRAL 971

Query: 730  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 789
            YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA
Sbjct: 972  YGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHA 1031

Query: 790  ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTAST 849
            ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDS+TAST
Sbjct: 1032 ISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTAST 1091

Query: 850  PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA 909
            PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHI               
Sbjct: 1092 PLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHI--------------- 1151

Query: 910  VLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRS 969
                     GTLGHGLQFSSQSSLVLSGYSDADWAGDPT RRSTTGYCFYLGDSLISWRS
Sbjct: 1152 ---------GTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRS 1211

Query: 970  KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 990
            KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV
Sbjct: 1212 KKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDV 1271

[Close]

BLAST of MELO.jh102403.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 438.3 bits (1126), Expect = 1.6e-122
Identity = 247/577 (42.81%), Postives = 339/577 (58.75%), Query Frame = 0


Query: 461 APTSATS----DQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFST---------- 520
           A TS++S      ++I +  P+P      RR+ +    P +LQDY+C S           
Sbjct: 7   ASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRK----PAYLQDYYCHSVASLTIHDISQ 66

Query: 521 -----------------IVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPP 580
                            I    EP++Y EA    +W  AM+DE+ A+E  HTW+   LPP
Sbjct: 67  FLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPP 126

Query: 581 GKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSV------ 640
            K+PIGCKW+YKIK +SDGTIE YKARLVAKGY+Q+ GID+ ETF+PV ++TSV      
Sbjct: 127 NKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAI 186

Query: 641 ------------------------QVYMKPPP------GTSSPPHKVCLLRRALYGLKQA 700
                                   ++YMK PP      G S PP+ VC L++++YGLKQA
Sbjct: 187 SAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 246

Query: 701 PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQH 760
            R WF  FS T+   GF  S  D   F + T    + +L+YVDD+II  N+  A+ +L+ 
Sbjct: 247 SRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 306

Query: 761 YLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSSTASTPLDPNV 820
            L   F+++DLG L YFLGLE++R + G  + Q KYA DLL  +G+     +S P+DP+V
Sbjct: 307 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 366

Query: 821 HLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILR 880
             + + G    +   YR+L+G L+YL +TR DI++AV+ +SQF  APR  H  AV++IL 
Sbjct: 367 TFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILH 426

Query: 881 YVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRSTTGYCFYLGDSLISWRSKKQSVV 940
           Y+KGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+SKKQ VV
Sbjct: 427 YIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 486

Query: 941 SRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTK 971
           S+SS E+EYRAL+ AT E++WL     ++ +P   PTLL CDN +AI IA N VFHERTK
Sbjct: 487 SKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTK 546

[Close]

BLAST of MELO.jh102403.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 1.2e-50
Identity = 106/224 (47.32%), Postives = 144/224 (64.29%), Query Frame = 0


Query: 671 LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYA 730
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 731 SDLLARSGITDSSTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAV 790
             +L  +G+ D    STPL   ++ +        + S +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 791 HIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTGRRS 850
           +IV Q M  P    F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 851 TTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLW 895
           TTG+C +LG ++ISW +K+Q  VSRSSTE+EYRALA   AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of MELO.jh102403.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 97.4 bits (241), Expect = 6.7e-20
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 512 EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE 571
           EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 572 CYKARLVAKGYSQEYGIDYEETFAPVARMTSVQVYM 608
             KARLVAKG+ QE GI + ET++PV R  +++  +
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122

[Close]

BLAST of MELO.jh102403.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-17
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 777 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGY 836
           +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L YVKGT+G GL +S+ S L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 837 SDADWAGDPTGRRSTTGYC 856
           +D+DWA  P  RRS TG+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of MELO.jh102403.1 vs. NCBI nr


Match Name	Identity	Description
KAA0037745.1	84.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	83.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	83.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK21532.1	81.90	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK19656.1	81.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of MELO.jh102403.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.6e-167	37.01	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.2e-161	34.37	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.4e-136	35.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.7e-114	29.46	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	1.8e-49	47.32	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO.jh102403.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7T8F2	84.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VIT8	83.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	83.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DD70	81.90	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	81.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of MELO.jh102403.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.6e-122	42.81	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.2e-50	47.32	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	6.7e-20	46.88	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	1.8e-17	51.90	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 190..289 e-value: 3.8E-10 score: 40.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 187..353 score: 19.73737
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 183..362 e-value: 2.0E-39 score: 137.0
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 604..749 e-value: 2.3E-36 score: 125.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..490
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 133..427 coord: 492..868
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 835..972 e-value: 1.406E-74 score: 239.678
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 540..940
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 189..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102403.1.t1	MELO.jh102403.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding