MELO.jh102249.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh102249.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGag-pol polyprotein
Locationchr08: 28839995 .. 28840393 (-)
RNA-Seq ExpressionMELO.jh102249.1
SyntenyMELO.jh102249.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGAAGAATTACTCCAGTTTAAGCATAACAATGTGTGGACCCTGGTTCCTAAACCTGATGGATCAAATATTATAGGCACCAAATGGATCTTTAAAAATAAGACTGATGAAGCAGGACATGTAACAAGAAACAAGGCACGATTGGTGGCTCAGGGTTATGCACAGGTAGAAGGAGTTGATTTTAATGAAACATTTGCACCTGTTGCCAAACTTGAAGCTATACGCCTCTTACTCAGCATATCATGCATTCGCAAATTTAAATTATATCAGATGGATGTCAAGAGTGCCTTTTTGAATGGATACTTGAATGAAGAAGTTTATGTTGCCCAGCATGTGTATAAGCTTAATAAAGCTCTATATGGGCTGAAGCAAGCACCAAGAGCTTGGTACGAATGA

mRNA sequence

ATGCAAGAAGAATTACTCCAGTTTAAGCATAACAATGTGTGGACCCTGGTTCCTAAACCTGATGGATCAAATATTATAGGCACCAAATGGATCTTTAAAAATAAGACTGATGAAGCAGGACATGTAACAAGAAACAAGGCACGATTGGTGGCTCAGGGTTATGCACAGGTAGAAGGAGTTGATTTTAATGAAACATTTGCACCTGTTGCCAAACTTGAAGCTATACGCCTCTTACTCAGCATATCATGCATTCGCAAATTTAAATTATATCAGATGGATGTCAAGAGTGCCTTTTTGAATGGATACTTGAATGAAGAAGTTTATGTTGCCCAGCATGTGTATAAGCTTAATAAAGCTCTATATGGGCTGAAGCAAGCACCAAGAGCTTGGTACGAATGA

Coding sequence (CDS)

ATGCAAGAAGAATTACTCCAGTTTAAGCATAACAATGTGTGGACCCTGGTTCCTAAACCTGATGGATCAAATATTATAGGCACCAAATGGATCTTTAAAAATAAGACTGATGAAGCAGGACATGTAACAAGAAACAAGGCACGATTGGTGGCTCAGGGTTATGCACAGGTAGAAGGAGTTGATTTTAATGAAACATTTGCACCTGTTGCCAAACTTGAAGCTATACGCCTCTTACTCAGCATATCATGCATTCGCAAATTTAAATTATATCAGATGGATGTCAAGAGTGCCTTTTTGAATGGATACTTGAATGAAGAAGTTTATGTTGCCCAGCATGTGTATAAGCTTAATAAAGCTCTATATGGGCTGAAGCAAGCACCAAGAGCTTGGTACGAATGA

Protein sequence

MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGVDFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKALYGLKQAPRAWYE
Homology
BLAST of MELO.jh102249.1 vs. NCBI nr
Match: KAA0065523.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK29295.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 271 bits (692), Expect = 4.45e-88
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV
Sbjct: 249 MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 308

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKAL 120
           DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKAL
Sbjct: 309 DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKAL 368

Query: 121 YGLKQAPRAWYE 132
           YGLKQAPRAWYE
Sbjct: 369 YGLKQAPRAWYE 380

BLAST of MELO.jh102249.1 vs. NCBI nr
Match: KAA0038418.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (598), Expect = 2.86e-74
Identity = 117/143 (81.82%), Postives = 125/143 (87.41%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFK N+VWTLVPKPDG+NIIGTKWIFKNKTDE+G V RNKARLVAQGYAQVEGV
Sbjct: 76  MQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGV 135

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFAPVA+LEAIR LLS+SC RKFKLYQMDVKSAFLNGYLNE+VYVAQ         
Sbjct: 136 DFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQLKGFVDSEF 195

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYKLN ALYGLKQAPR WYE
Sbjct: 196 PQYVYKLNNALYGLKQAPRTWYE 218

BLAST of MELO.jh102249.1 vs. NCBI nr
Match: KAA0037650.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22795.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (600), Expect = 3.12e-74
Identity = 116/143 (81.12%), Postives = 127/143 (88.81%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFK NNVWT+VPKPDG+N+IGTKWIFKNKTDE+G + RNKARL+AQGYAQVEGV
Sbjct: 130 MQEELLQFKRNNVWTMVPKPDGANVIGTKWIFKNKTDESGSIIRNKARLIAQGYAQVEGV 189

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFA VA+LEAIRLLLSISC RKFKL++MDVKSAFLNGYLNEEVYVAQ         
Sbjct: 190 DFDETFALVARLEAIRLLLSISCFRKFKLFRMDVKSAFLNGYLNEEVYVAQPKGFVDSEF 249

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYKLNKALYGLKQAPRAWYE
Sbjct: 250 PQYVYKLNKALYGLKQAPRAWYE 272

BLAST of MELO.jh102249.1 vs. NCBI nr
Match: TYJ98295.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 2.81e-72
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFKHNNVWTLVPKPDG+NIIGTKWIFKNKTDE+G V RNKA LVAQGYAQVEGV
Sbjct: 442 MQEELLQFKHNNVWTLVPKPDGANIIGTKWIFKNKTDESGSVVRNKACLVAQGYAQVEGV 501

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFAPVA+LEAIRLLL ISC RKFKL+QMDVKSAFLNGYLNEEVYVAQ         
Sbjct: 502 DFDETFAPVARLEAIRLLLRISCFRKFKLFQMDVKSAFLNGYLNEEVYVAQPKGFIDSEF 561

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYK+NKALYGLKQAPRAWYE
Sbjct: 562 PQYVYKINKALYGLKQAPRAWYE 584

BLAST of MELO.jh102249.1 vs. NCBI nr
Match: TYJ96974.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (580), Expect = 1.50e-71
Identity = 115/143 (80.42%), Postives = 123/143 (86.01%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFK N+VWTLVPKPDG NIIGTKWIFKNKTDE+G V RNKARLVAQGYAQVEGV
Sbjct: 76  MQEELLQFKRNDVWTLVPKPDGGNIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGV 135

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFAPVA+LEAIR LLS+SC RKFKLYQ+DVKSAFLNGYLNE+VYVAQ         
Sbjct: 136 DFDETFAPVARLEAIRFLLSVSCFRKFKLYQIDVKSAFLNGYLNEKVYVAQLKGFVDSEF 195

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYKLN ALYGLKQAPR  YE
Sbjct: 196 PQYVYKLNNALYGLKQAPRTCYE 218

BLAST of MELO.jh102249.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 134.4 bits (337), Expect = 9.2e-31
Identity = 65/138 (47.10%), Postives = 92/138 (66.67%), Query Frame = 0

Query: 4    ELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGVDFN 63
            EL   K NN WT+  +P+  NI+ ++W+F  K +E G+  R KARLVA+G+ Q   +D+ 
Sbjct: 913  ELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYE 972

Query: 64   ETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYV---------AQHVY 123
            ETFAPVA++ + R +LS+      K++QMDVK+AFLNG L EE+Y+         + +V 
Sbjct: 973  ETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVC 1032

Query: 124  KLNKALYGLKQAPRAWYE 133
            KLNKA+YGLKQA R W+E
Sbjct: 1033 KLNKAIYGLKQAARCWFE 1050

BLAST of MELO.jh102249.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.1e-27
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEE+   + N  + LV  P G   +  KW+FK K D    + R KARLV +G+ Q +G+
Sbjct: 830 MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+E F+PV K+ +IR +LS++     ++ Q+DVK+AFL+G L EE+Y+ Q         
Sbjct: 890 DFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK 949

Query: 121 --HVYKLNKALYGLKQAPRAWY 132
              V KLNK+LYGLKQAPR WY
Sbjct: 950 KHMVCKLNKSLYGLKQAPRQWY 971

BLAST of MELO.jh102249.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.7e-27
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 0

Query: 11   NNVWTLVPKPDGS-NIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGVDFNETFAPV 70
            N+ W LVP P  S  I+G +WIF  K +  G + R KARLVA+GY Q  G+D+ ETF+PV
Sbjct: 965  NHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPV 1024

Query: 71   AKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ-----------HVYKLNK 130
             K  +IR++L ++  R + + Q+DV +AFL G L +EVY++Q           +V +L K
Sbjct: 1025 IKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRK 1084

Query: 131  ALYGLKQAPRAWY 132
            A+YGLKQAPRAWY
Sbjct: 1085 AIYGLKQAPRAWY 1097

BLAST of MELO.jh102249.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.2e-27
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 0

Query: 11   NNVWTLVPKPDGS-NIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGVDFNETFAPV 70
            N+ W LVP P     I+G +WIF  K +  G + R KARLVA+GY Q  G+D+ ETF+PV
Sbjct: 982  NHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPV 1041

Query: 71   AKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ-----------HVYKLNK 130
             K  +IR++L ++  R + + Q+DV +AFL G L ++VY++Q           +V KL K
Sbjct: 1042 IKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRK 1101

Query: 131  ALYGLKQAPRAWY 132
            ALYGLKQAPRAWY
Sbjct: 1102 ALYGLKQAPRAWY 1114

BLAST of MELO.jh102249.1 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEEL     N  W LVP P   NI+G KW+FK K    G + R KARLVA+G+ Q EG+
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  DFNETFAPVAKLEAIRLLLSIS 83
            F ET++PV +   IR +L+++
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125

BLAST of MELO.jh102249.1 vs. ExPASy TrEMBL
Match: A0A5A7VBG7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00630 PE=4 SV=1)

HSP 1 Score: 271 bits (692), Expect = 2.15e-88
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV
Sbjct: 249 MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 308

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKAL 120
           DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKAL
Sbjct: 309 DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQHVYKLNKAL 368

Query: 121 YGLKQAPRAWYE 132
           YGLKQAPRAWYE
Sbjct: 369 YGLKQAPRAWYE 380

BLAST of MELO.jh102249.1 vs. ExPASy TrEMBL
Match: A0A5A7T6D6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003170 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 1.38e-74
Identity = 117/143 (81.82%), Postives = 125/143 (87.41%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFK N+VWTLVPKPDG+NIIGTKWIFKNKTDE+G V RNKARLVAQGYAQVEGV
Sbjct: 76  MQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGV 135

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFAPVA+LEAIR LLS+SC RKFKLYQMDVKSAFLNGYLNE+VYVAQ         
Sbjct: 136 DFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQLKGFVDSEF 195

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYKLN ALYGLKQAPR WYE
Sbjct: 196 PQYVYKLNNALYGLKQAPRTWYE 218

BLAST of MELO.jh102249.1 vs. ExPASy TrEMBL
Match: A0A5A7T2Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00330 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.51e-74
Identity = 116/143 (81.12%), Postives = 127/143 (88.81%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFK NNVWT+VPKPDG+N+IGTKWIFKNKTDE+G + RNKARL+AQGYAQVEGV
Sbjct: 130 MQEELLQFKRNNVWTMVPKPDGANVIGTKWIFKNKTDESGSIIRNKARLIAQGYAQVEGV 189

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFA VA+LEAIRLLLSISC RKFKL++MDVKSAFLNGYLNEEVYVAQ         
Sbjct: 190 DFDETFALVARLEAIRLLLSISCFRKFKLFRMDVKSAFLNGYLNEEVYVAQPKGFVDSEF 249

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYKLNKALYGLKQAPRAWYE
Sbjct: 250 PQYVYKLNKALYGLKQAPRAWYE 272

BLAST of MELO.jh102249.1 vs. ExPASy TrEMBL
Match: A0A5D3BIP9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00070 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.36e-72
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFKHNNVWTLVPKPDG+NIIGTKWIFKNKTDE+G V RNKA LVAQGYAQVEGV
Sbjct: 442 MQEELLQFKHNNVWTLVPKPDGANIIGTKWIFKNKTDESGSVVRNKACLVAQGYAQVEGV 501

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFAPVA+LEAIRLLL ISC RKFKL+QMDVKSAFLNGYLNEEVYVAQ         
Sbjct: 502 DFDETFAPVARLEAIRLLLRISCFRKFKLFQMDVKSAFLNGYLNEEVYVAQPKGFIDSEF 561

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYK+NKALYGLKQAPRAWYE
Sbjct: 562 PQYVYKINKALYGLKQAPRAWYE 584

BLAST of MELO.jh102249.1 vs. ExPASy TrEMBL
Match: A0A5D3BD92 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00180 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 7.28e-72
Identity = 115/143 (80.42%), Postives = 123/143 (86.01%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEELLQFK N+VWTLVPKPDG NIIGTKWIFKNKTDE+G V RNKARLVAQGYAQVEGV
Sbjct: 76  MQEELLQFKRNDVWTLVPKPDGGNIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGV 135

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVAQ--------- 120
           DF+ETFAPVA+LEAIR LLS+SC RKFKLYQ+DVKSAFLNGYLNE+VYVAQ         
Sbjct: 136 DFDETFAPVARLEAIRFLLSVSCFRKFKLYQIDVKSAFLNGYLNEKVYVAQLKGFVDSEF 195

Query: 121 --HVYKLNKALYGLKQAPRAWYE 132
             +VYKLN ALYGLKQAPR  YE
Sbjct: 196 PQYVYKLNNALYGLKQAPRTCYE 218

BLAST of MELO.jh102249.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 120.9 bits (302), Expect = 7.5e-28
Identity = 61/146 (41.78%), Postives = 88/146 (60.27%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           M +E+   +  + W +   P     IG KW++K K +  G + R KARLVA+GY Q EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  DFNETFAPVAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYV----------- 120
           DF ETF+PV KL +++L+L+IS I  F L+Q+D+ +AFLNG L+EE+Y+           
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221

Query: 121 ----AQHVYKLNKALYGLKQAPRAWY 132
                  V  L K++YGLKQA R W+
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWF 247

BLAST of MELO.jh102249.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 1   MQEELLQFKHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGV 60
           MQEEL     N  W LVP P   NI+G KW+FK K    G + R KARLVA+G+ Q EG+
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  DFNETFAPVAKLEAIRLLLSIS 83
            F ET++PV +   IR +L+++
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065523.14.45e-88100.00gag-pol polyprotein [Cucumis melo var. makuwa] >TYK29295.1 gag-pol polyprotein [... [more]
KAA0038418.12.86e-7481.82gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0037650.13.12e-7481.12gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22795.1 gag-pol polyprotein [... [more]
TYJ98295.12.81e-7283.92gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYJ96974.11.50e-7180.42gag-pol polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P041469.2e-3147.10Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109782.1e-2745.07Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q9ZT944.7e-2747.37Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW26.2e-2747.37Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P925201.9e-1547.56Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5A7VBG72.15e-88100.00Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212... [more]
A0A5A7T6D61.38e-7481.82Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G... [more]
A0A5A7T2Q01.51e-7481.12Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G... [more]
A0A5D3BIP91.36e-7283.92Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G... [more]
A0A5D3BD927.28e-7280.42Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G... [more]
Match NameE-valueIdentityDescription
AT4G23160.17.5e-2841.78cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.11.3e-1647.56Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 11..131
e-value: 7.3E-41
score: 140.4
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..131
NoneNo IPR availablePANTHERPTHR11439:SF351CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 1..131
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 10..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh102249.1.t1MELO.jh102249.1.t1mRNA