MELO.jh102160.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102160.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Beta-galactosidase
Location	chr08: 13387867 .. 13391823 (+)
RNA-Seq Expression	MELO.jh102160.1
Synteny	MELO.jh102160.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATGAGAAGCATGATTTCTAAAGAAAGCTTTTATGTGTTAAAAGGATGAGTTTCGTGTTTACTGATTGTATGCTATGCTTGTAAGTAAACCATTAGTCTTATTCCTACCAAAAAACTAGCTATTATGTGCACATAATGAGTCAAGGCAACCATTGGCGATAAGAAGCTGACCAATGCAATTGTGTTAGCAGCCTGAGCAACAAGAAATCAATTGGGAGATTCTCAGGAGATGCTGATGATGATGCAATCATCATAGTAGTCTATGCATGAGAATAGTTCTTGTTCTTGACGGAAAGGAATGAGTAGAGACTAATATGTGTTTTATGTGATTTTATGAAATGAGGCATGAAGCCTGTTTTTGCTTATGAAAATGAATGTGTTGGTTGAATTGTATTCCCCAAAAAGATTTCTAAAAGTATCACTCATTAAGTATTCAACTTACATTTTAAGTTTCTCTTCCCCAAGTAACCAAACGTTAGGGCCAAGTTAAGAAGAGTAAAGCAAGTTGCTATGTGTGGAGGCGTTAGCTAGGCGATCTAGGTTTAAACTTGAAAAGTTGAGCTAGACGTTGAAGGTCTGAAGTTTATTTTAAGTCTTGTTGTATAGAGAAAGCACGTATAGTGTATTTGTGGAACGCGTAGAGTTAAGTTAATAAAAGAGAAGTTTTGTTATTTCCGCTGTATAATGTTTTCTTAATCGCTTAGTAGTTTAAAAGGACTTAAGATCGAACTAGGCGATTTAAGCCAAGCTTCAAGAACTTAAGTGAGCAATTTGGCATTTCGCTTTAGAAGCGTGGGCTGCTCAAGTTGCGTCGCATGCCTCATAACGAGGTTAAGGAGGCGTGCGGACTGAGCGTGACACACCAGCATCTCCAACTTCTTGAACTAGATCAGGTCCTACCTTGCCCTGCTGCCCCTTCTTGGAGTTGGGAAGATTCCCCCTCCTCCGGCTCCTTTGTTTCCGAATCTTCGTCCTCGATTCGCATCCTCCTCTTTCCCGTACTCACCCCCGTTATTTCTAAGGTTGTTTGTAGTCGTTGCTGGTCTTCATACATCTCAGATAACATGACGTGCATTTTTTACAGCGTTTTCTCAAGTGTTGATATCCTCTGTATTTCTTGCTTGATGGCTCTAATGTCCATGTTACATACCTAGATTAGTATAGGGTTAGGGGTATAAGGCTAATTAGATATTTAGATAGTTACATATTGTAGTTGTTATTAATAAGAAGTTGGAGAGGGAAGAAGGGGGGATCAGTTATTTGTGAGTGGGCTGTTCACCCTTGAGAGGAGGATAATAGAGTGTGTTTGTTCTTGTTTTTCTTATAGTATTTTGTGTTTTATTTCTAAATTGATAATCTATCAATCTTTCTTTGTACTGAAGTTTCTCTTACCAATTGAATAAAGAACATCTATACTAGTGTTCTATCAGTCTGCTTCCGTCGCATTAAGTCTCTCCTCGAGTTGTTTTTGTGTCATATTCCTCCATCTCCCCAGATTTTTGAACGACTCTGATACAACTTGCCAAGACCGAAAACACTTGAAGAAGATGACAACAGAAAAATAAAACGAGAACAAGGAGCAACCAAAGATTTGCAGTACTGTAGAATTATTTTTGGAAAGAATAATATATAAGATTTTATTTCCTAAATATTTCCTAGATATTTTCCTTTCTTACTCTTATTGTACTCTATTTATTCTCTCCCTTTGTACCCATTGTATTCATATCAGAAAATAATAAAACTAAAAACATCGTGGTTTTTCTCCCGGTTCTCGGGTTTCCACGTAAACCGGTTTCGTGTTTATTGCTTTCAATATGGTATCAAAGTGAAGCAACAATGAAACCCTAGAAAAAATTTTAGGAATAACCCAGACCAAAACAGCCGTCGCCGCCGTGGACACCACCATGGAAAAACTACTCCACCGGATTCAGACGCCGCCGATCTATCCAATGGGCCAAGCCCCACCACCGTCTGCGCAACTTTCCGGCCAAGAACCAATTCACGCGCCGCCTCTGTCGGGCGCGTGGGCCCACGCGCCGCCGCCCGTTAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCGTCGTCTGTCCAACCGTCTCACCCTTCCGGTCATCCGCCGCCGCACGCGCCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAATGCAGATCTGTGCGTCGATCCTTTACAGCAACCTTTCTGCTATAGGAACGGGGCTGACCAACACCATAACAGATTGTGGATTGAAGTGGGCGAGCCATCGGTACCCTCCGGTTATGGACAGCCATATGTTCATGGTCTCGGGATTAATCATACCTATAGGAGAGCTATCTTTGAAGTTAGTACATCCTTGGCATAGACCGATCTACCGATGTATTCCAAGAACCCGGTAATTTCGCTTCCTAATGTGCCTTCAAATTATATAACTAACTCTGTTGCCTTTAGTGCTCAATCCTTGACCCATGATAATGAGAAACCAATTCTCGTTTGTGAGCACTGCAAGAAACAACGGCATACCAAGGATCGGTGTTGGAAACTCCACGGTCGGCCCCCAAGAGGTAACAAACGCTCCTCCAAGGAGCAACAGAACTTAGGGCGTACTGATGTTAGGGAGACTGCTAGCACCTCTCAGCCCATTGGCCCTACTGCTAGTCAGACCAGCTGTCCTACTCTAAGCGTCATTGCTCAATCAGGTATGTCTCAGTCCTCTGGCCTTATTAGTGTTGATGGGACAAATCCCTAGATTTTGGACTCGGGGGCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACCCCTGTGTCGATAATGAGAAAATCCGGATAGCCGATGGCTCTTTAGCTCCGATTGCTGGAAAATGACAAATAGTCCTCTTTGATGGTTTCTCCCTCCATAATGTTGTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACCCGTGAGCTGCACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTGCTTTCAAGACTTGAATTCAGAGAGAACGATTAGCAGTGCCTGACATAGCAGAGGATTTTACATCCTTAATGATGATACCTCCGACAGTAGTATCTCTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTTGTGGCATTTTCGATTAGGTCACCCAAACTTTACGTATATGAAATATTTGTTTCCCCATCTCTTTCTTAAAATAGATGTCTCCTCGTTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTCCCTCACGACCATATAAACCCACACAACCGTTTACCCTTATCCACAGTGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAATTGCTATTCTTCTAAGTGACAACGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCTAAGGGGATTGTTCACCCAAACTCGTGCGCCTACACTCAACAAAATAGAGTGGCCGAGCGAAAAAATCGTCACCTTTTGAAAGTAGCCCGTTCCCTTATGCTTTCCACTTCCCTTCCTTCATACCTGTGGGGAGATGCTATTCTTACAGCAGCTCATTTAATCAATAGAATGTCCTCTCGTATCCTCCACCTTCAAACTCCCTTGGAATGCCTTAAGGAGTCCTACCCCTCTACTCGTCTCGTTTCAAAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAGTTTTTGCCCTAATCAGACCAAATTTACCCCTCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCCCTTCACTAA

mRNA sequence

ATGTTTATGAGAAGCATGATTTCTAAAGAAAGCTTTTATAAGCGTGGGCTGCTCAAGTTGCGTCGCATGCCTCATAACGAGGTTAAGGAGGCGTGCGGACTGAGCGTGACACACCAGCATCTCCAACTTCTTGAACTAGATCAGGTCCTACCTTGCCCTGCTGCCCCTTCTTGGAGTTGGGAAGATTCCCCCTCCTCCGGCTCCTTTGTTTCCGAATCTTCGTCCTCGATTCGCATCCTCCTCTTTCCCGTACTCACCCCCGTTATTTCTAAGACCAAAACAGCCGTCGCCGCCGTGGACACCACCATGGAAAAACTACTCCACCGGATTCAGACGCCGCCGATCTATCCAATGGGCCAAGCCCCACCACCGTCTGCGCAACTTTCCGGCCAAGAACCAATTCACGCGCCGCCTCTGTCGGGCGCGTGGGCCCACGCGCCGCCGCCCGTTAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCGTCGTCTGTCCAACCGTCTCACCCTTCCGGTCATCCGCCGCCGCACGCGCCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAATGCAGATCTGTGCGTCGATCCTTTACAGCAACCTTTCTGCTATAGGAACGGGGCTGACCAACACCATAACAGATTGTGGATTGAAGTGGGCGAGCCATCGGTACCCTCCGGTTATGGACAGCCATATGTTCATGGTCTCGGGATTAATCATACCTATAGGAGAGCTATCTTTGAATGCTCAATCCTTGACCCATGATAATGAGAAACCAATTCTCGTTTGTGAGCACTGCAAGAAACAACGGCATACCAAGGATCGGTGTTGGAAACTCCACGGTCGGCCCCCAAGAGGTAACAAACGCTCCTCCAAGGAGCAACAGAACTTAGGGCGTACTGATGTTAGGGAGACTGCTAGCACCTCTCAGCCCATTGGCCCTACTGCTAGTCAGACCAGCTGTCCTACTCTAAGCGTCATTGCTCAATCAGATGTCTCCTCGTTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTCCCTCACGACCATATAAACCCACACAACCGTTTACCCTTATCCACAGTGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAATTGCTATTCTTCTAAGTGACAACGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCTAAGGGGATTGTTCACCCAAACTCGTGCGCCTACACTCAACAAAATAGAGTGGCCGAGCGAAAAAATCGTCACCTTTTGAAAGTAGCCCGTTCCCTTATGCTTTCCACTTCCCTTCCTTCATACCTGTGGGGAGATGCTATTCTTACAGCAGCTCATTTAATCAATAGAATGTCCTCTCGTATCCTCCACCTTCAAACTCCCTTGGAATGCCTTAAGGAGTCCTACCCCTCTACTCGTCTCGTTTCAAAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAGTTTTTGCCCTAATCAGACCAAATTTACCCCTCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCCCTTCACTAA

Coding sequence (CDS)

ATGTTTATGAGAAGCATGATTTCTAAAGAAAGCTTTTATAAGCGTGGGCTGCTCAAGTTGCGTCGCATGCCTCATAACGAGGTTAAGGAGGCGTGCGGACTGAGCGTGACACACCAGCATCTCCAACTTCTTGAACTAGATCAGGTCCTACCTTGCCCTGCTGCCCCTTCTTGGAGTTGGGAAGATTCCCCCTCCTCCGGCTCCTTTGTTTCCGAATCTTCGTCCTCGATTCGCATCCTCCTCTTTCCCGTACTCACCCCCGTTATTTCTAAGACCAAAACAGCCGTCGCCGCCGTGGACACCACCATGGAAAAACTACTCCACCGGATTCAGACGCCGCCGATCTATCCAATGGGCCAAGCCCCACCACCGTCTGCGCAACTTTCCGGCCAAGAACCAATTCACGCGCCGCCTCTGTCGGGCGCGTGGGCCCACGCGCCGCCGCCCGTTAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCGTCGTCTGTCCAACCGTCTCACCCTTCCGGTCATCCGCCGCCGCACGCGCCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAATGCAGATCTGTGCGTCGATCCTTTACAGCAACCTTTCTGCTATAGGAACGGGGCTGACCAACACCATAACAGATTGTGGATTGAAGTGGGCGAGCCATCGGTACCCTCCGGTTATGGACAGCCATATGTTCATGGTCTCGGGATTAATCATACCTATAGGAGAGCTATCTTTGAATGCTCAATCCTTGACCCATGATAATGAGAAACCAATTCTCGTTTGTGAGCACTGCAAGAAACAACGGCATACCAAGGATCGGTGTTGGAAACTCCACGGTCGGCCCCCAAGAGGTAACAAACGCTCCTCCAAGGAGCAACAGAACTTAGGGCGTACTGATGTTAGGGAGACTGCTAGCACCTCTCAGCCCATTGGCCCTACTGCTAGTCAGACCAGCTGTCCTACTCTAAGCGTCATTGCTCAATCAGATGTCTCCTCGTTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTCCCTCACGACCATATAAACCCACACAACCGTTTACCCTTATCCACAGTGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAATTGCTATTCTTCTAAGTGACAACGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCTAAGGGGATTGTTCACCCAAACTCGTGCGCCTACACTCAACAAAATAGAGTGGCCGAGCGAAAAAATCGTCACCTTTTGAAAGTAGCCCGTTCCCTTATGCTTTCCACTTCCCTTCCTTCATACCTGTGGGGAGATGCTATTCTTACAGCAGCTCATTTAATCAATAGAATGTCCTCTCGTATCCTCCACCTTCAAACTCCCTTGGAATGCCTTAAGGAGTCCTACCCCTCTACTCGTCTCGTTTCAAAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAGTTTTTGCCCTAATCAGACCAAATTTACCCCTCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCCCTTCACTAA

Protein sequence

MFMRSMISKESFYKRGLLKLRRMPHNEVKEACGLSVTHQHLQLLELDQVLPCPAAPSWSWEDSPSSGSFVSESSSSIRILLFPVLTPVISKTKTAVAAVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYASSSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKWASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQQNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKESYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH

Homology

[Close]

BLAST of MELO.jh102160.1 vs. NCBI nr
Match: KAA0043638.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK09725.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 960 bits (2482), Expect = 0.0
Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 0


Query: 103 MEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYAS 162
           MEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYAS
Sbjct: 1   MEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYAS 60

Query: 163 SSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKW 222
           SSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKW
Sbjct: 61  SSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKW 120

Query: 223 ASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKL 282
           ASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKL
Sbjct: 121 ASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKL 180

Query: 283 HGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDV 342
           HGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDV
Sbjct: 181 HGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDV 240

Query: 343 CIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 402
           CIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI
Sbjct: 241 CIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 300

Query: 403 TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQ 462
           TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQ
Sbjct: 301 TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQ 360

Query: 463 QNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKE 522
           QNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKE
Sbjct: 361 QNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKE 420

Query: 523 SYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH 569
           SYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH
Sbjct: 421 SYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH 467

[Close]

BLAST of MELO.jh102160.1 vs. NCBI nr
Match: KAA0067153.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK26002.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 634 bits (1635), Expect = 6.22e-213
Identity = 364/598 (60.87%), Postives = 385/598 (64.38%), Query Frame = 0


Query: 89  ISKTKTAVAA------VDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGA 148
           I++TKT  AA      VDTTMEKLLHRIQTPPIYPMGQ  PPS QLS Q+PIHA  LSGA
Sbjct: 17  ITRTKTVAAATSVTVAVDTTMEKLLHRIQTPPIYPMGQPLPPSTQLSNQKPIHASLLSGA 76

Query: 149 WAHAPPPVNLTAHPIRFYASSSVQPSHPSGHPPPHAPP---DSNLQNCQICTAMQICASI 208
           WAH P PVNLTAHPIRFYASS VQPSHPSGHP PH PP   + NLQNCQICT +QIC S 
Sbjct: 77  WAHTPSPVNLTAHPIRFYASSPVQPSHPSGHPSPHTPPIAVEHNLQNCQICTVVQICPST 136

Query: 209 LYSNLSAIGTGLTNTITDCGLKWASHRY-PPVMDSHMFMVS-GLIIPIGELSLN------ 268
           LYSNLSA+GTGLTNTITDCGLK A       +  + + M S   II +  +  N      
Sbjct: 137 LYSNLSALGTGLTNTITDCGLKRAVFEVNTSLTQTDLLMYSKNPIISLPNMPSNYITNFV 196

Query: 269 ---AQSLTHDNEKPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRET 328
              AQSLT+DNEKPILVCEHC+KQ HTKDRCWKLHG PPRGNKRS KEQQNLGRT VRET
Sbjct: 197 AFSAQSLTYDNEKPILVCEHCRKQWHTKDRCWKLHGWPPRGNKRSFKEQQNLGRTGVRET 256

Query: 329 ASTSQPIGPTASQTSCPTLSVIAQS----------------------------------- 388
            STSQPIGPTAS TS PTLS+IAQS                                   
Sbjct: 257 VSTSQPIGPTASLTSSPTLSIIAQSGMSQSFGLISVDGTNPWILNSRATNHLTGFSEHFV 316

Query: 389 ------------------------------------------------------------ 448
                                                                       
Sbjct: 317 TYTPCTGNEKIQIVDGSFAPIAGKGQIVLFDVFSLHNVLHVPKLSYNLLSIRRTIGTAWH 376

Query: 449 -------------------------------DVSSLSCDVCIRAKQHRVSFPSRPYKPTQ 508
                                          DVSSLSCDVCI AKQHRVSF S+ YKPTQ
Sbjct: 377 SKGLYILNDNTSGHPNFTYMKYLFPHLFLKIDVSSLSCDVCIGAKQHRVSFSSQLYKPTQ 436

Query: 509 PFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQ 539
           PFTLIHSDVWGPSKVTTSSGKRWFVTFI DHT LTWVYLITDKSEVSAIFQNFYHTIETQ
Sbjct: 437 PFTLIHSDVWGPSKVTTSSGKRWFVTFIHDHTHLTWVYLITDKSEVSAIFQNFYHTIETQ 496

[Close]

BLAST of MELO.jh102160.1 vs. NCBI nr
Match: KAA0054937.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK22726.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 606 bits (1563), Expect = 3.81e-201
Identity = 356/608 (58.55%), Postives = 377/608 (62.01%), Query Frame = 0


Query: 93  KTAVA-AVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVN 152
           KTAV  AVDTTMEKLLHRIQTPPIYPMGQ PPPSAQLS QEPIHA PLSGAWAHAP PVN
Sbjct: 21  KTAVTVAVDTTMEKLLHRIQTPPIYPMGQPPPPSAQLSSQEPIHALPLSGAWAHAPLPVN 80

Query: 153 LTAHPIRFYASSSVQPSHPSGHPPPHAPPDSN----LQNCQICTAMQICASILYSNLSAI 212
           LT H I FYAS  VQPSHPSGHPPP      N      N       ++ A   Y  L   
Sbjct: 81  LTTHSICFYASLPVQPSHPSGHPPPPIAARQNGADQHHNRLWIEVGELSAPSSYGQLYVH 140

Query: 213 GTGLTNTITDCGLKWASH--RYPPVMDSHMFMVSGLIIP----IGELSLNAQSLTHDNEK 272
           G G+ +T      + ++   +   +M S   ++  L +P       ++ +AQSLTHDNEK
Sbjct: 141 GLGINHTYRRAVFEVSTSLAQIDLLMSSKNPVILLLNVPSNYITNSVAFSAQSLTHDNEK 200

Query: 273 PILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQ 332
           PILV EHCKKQRHTKDRCWKLHGR PRGNKRSSKEQQNLGR DVRETASTSQPIGP ASQ
Sbjct: 201 PILVSEHCKKQRHTKDRCWKLHGRSPRGNKRSSKEQQNLGRIDVRETASTSQPIGPAASQ 260

Query: 333 TSCPTLSVIAQS------------------------------------------------ 392
           TS P+LSVIAQS                                                
Sbjct: 261 TSSPSLSVIAQSGISQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPCVDNEKVRI 320

Query: 393 ------------------------------------------------------------ 452
                                                                       
Sbjct: 321 ADGSLAPIATKGQIVLFNSFSLHNVLHDLNSGRTIGTARYSRGLYILNDDTFGHPNFTYM 380

Query: 453 -----------DVSSLSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSG 512
                      DVSSLSCD+CIRAKQHRVSFPS+PYKPTQPFTLIHSDVWGPSKVTTSS 
Sbjct: 381 KYLFSHLFLKIDVSSLSCDMCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSR 440

Query: 513 KRWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHN 569
           K WFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKI IL SDNGREFQNHN
Sbjct: 441 KMWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKITILRSDNGREFQNHN 500

[Close]

BLAST of MELO.jh102160.1 vs. NCBI nr
Match: TYK02021.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 520 bits (1339), Expect = 1.51e-170
Identity = 330/665 (49.62%), Postives = 359/665 (53.98%), Query Frame = 0


Query: 89  ISKTKTAVAAVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPP 148
           I++TKTA AAVDTTMEKLL RIQTPPIYPMG+  PPS Q S Q+P+HAP LSGAWAHAP 
Sbjct: 86  ITQTKTA-AAVDTTMEKLLQRIQTPPIYPMGRPSPPSVQPSSQKPLHAPSLSGAWAHAPL 145

Query: 149 PVNLTAHPIRFYASSSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIG 208
            VNLT HPIRFYASS VQPSHPSGHPP H PP +  Q     + +   A+ LY++ +   
Sbjct: 146 FVNLTVHPIRFYASSLVQPSHPSGHPPLHVPPIAAKQQPSKLSNLYSSAN-LYNSANLYS 205

Query: 209 TGLTNTITD-----------------CGLKWASHRYP-----PVMDSHMFMVSGLI---- 268
           +  TN   D                  G+K      P     P  D  M+  + +I    
Sbjct: 206 S--TNLSVDPLQPFFYRNEADQYHNRLGIKAGESSAPFGYGQPYTDLPMYSKNPVISLSN 265

Query: 269 IP----IGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQ 328
           +P       ++ +AQSLTHDN KPILVCE+CKKQRH KD+CWKLH RPPRGNKRSS EQQ
Sbjct: 266 VPSNYITNSVAFSAQSLTHDNGKPILVCEYCKKQRHIKDQCWKLHSRPPRGNKRSSNEQQ 325

Query: 329 NLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSD------------------------ 388
           NL RTD RE ASTSQ IG TAS+T+ PTLS IAQSD                        
Sbjct: 326 NLRRTDSRENASTSQSIGATASKTNSPTLSAIAQSDHLTGFSKHFVTYTPCAGNEKIWIA 385

Query: 389 ------------------------------------------------------------ 448
                                                                       
Sbjct: 386 DGSLASIAGKGQIVLYDGFSLQNVLHVPKLFYNLLSISKITHELHCKATFLPESVCFQDL 445

Query: 449 ------------------------------------------------------------ 508
                                                                       
Sbjct: 446 NSERTIGTARHSRGIYILNDDTSGSNISTTSLLSSYFSTSEHDFMLWHFRLGHPNITYMK 505

Query: 509 -----------VSSLSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGK 567
                      VSSLSCDVCIRAKQHRVSFPS+PYKPTQPFTLIHSDVWGPSKVTTSSGK
Sbjct: 506 YLFPHLFLKIDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSGK 565

[Close]

BLAST of MELO.jh102160.1 vs. NCBI nr
Match: KAA0025138.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 532 bits (1370), Expect = 2.19e-168
Identity = 330/588 (56.12%), Postives = 350/588 (59.52%), Query Frame = 0


Query: 90   SKTKTAVAAVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPP 149
            +KT  A AAVDTTMEKLLHRIQTPPIYPMGQ PPPSAQL G+EPIHA PLSGAWAHAPPP
Sbjct: 491  TKTVAAAAAVDTTMEKLLHRIQTPPIYPMGQPPPPSAQLFGEEPIHALPLSGAWAHAPPP 550

Query: 150  VNLTAHPIRFYASSSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGT 209
            VNLTAHPIRFYASS VQPSH S H PPHAPP +  Q            S LYSN +   +
Sbjct: 551  VNLTAHPIRFYASSPVQPSHSSNHLPPHAPPIAAGQQPSKL-------SNLYSNANLYNS 610

Query: 210  GLTNTITDCGLKWASHRYPPVMDSHMFMVSGLIIPIGELS---------LNAQSLTHDNE 269
               N   D   + + +R    +D H    + L I +GE S         ++   + H   
Sbjct: 611  A--NLSVDPLQQPSCYRNE--VDQHH---NRLWIEVGEPSAPSSYGQPYVHGLGINHTYR 670

Query: 270  KPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTAS 329
            + +   EHCKKQRH KDRCWKLHGRP RGNKRSSKEQQNLGRTDVRETASTSQPIGPTAS
Sbjct: 671  RAVF--EHCKKQRHAKDRCWKLHGRPLRGNKRSSKEQQNLGRTDVRETASTSQPIGPTAS 730

Query: 330  QTSCPTLSVIAQSD---------------------------------------VSSLSCD 389
            Q+S PTLSVIAQSD                                          L C 
Sbjct: 731  QSS-PTLSVIAQSDHLTGFSEHFVTYTPCAGNEKIRIVDGSLAPISGKDKYRITRELHCK 790

Query: 390  -------VCI-------------------------------------------------- 449
                   VC                                                   
Sbjct: 791  ATFLLEPVCFQDLNSGRTIGTARHSRGLYILNDDTFGSSISTTSLLSSYFSTSEHDFMLW 850

Query: 450  --RAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 509
              RAK HRVSFPS+PYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTF DDHTRLTWVYLI
Sbjct: 851  HFRAK-HRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFTDDHTRLTWVYLI 910

Query: 510  TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYT- 569
            TDKSE                                           GIVH NSCAYT 
Sbjct: 911  TDKSE-------------------------------------------GIVHQNSCAYTP 970

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.2e-40
Identity = 87/228 (38.16%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 340 CDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWV 399
           CD C+  KQHRVSF +   +      L++SDV GP ++ +  G ++FVTFIDD +R  WV
Sbjct: 457 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWV 516

Query: 400 YLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCA 459
           Y++  K +V  +FQ F+  +E +  +K+  L SDNG E+ +    E+ +S GI H  +  
Sbjct: 517 YILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVP 576

Query: 460 YT-QQNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLE 519
            T Q N VAER NR +++  RS++    LP   WG+A+ TA +LINR  S  L  + P  
Sbjct: 577 GTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIP-- 636

Query: 520 CLKESYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGY 567
              E   + + VS   L+VFGC A+ H     +TK   ++  C+F+GY
Sbjct: 637 ---ERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY 679

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 8.6e-33
Identity = 86/244 (35.25%), Postives = 131/244 (53.69%), Query Frame = 0


Query: 326 TLSVIAQSDVSSLSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRW 385
           +LSV+  S    LSC  C+  K ++V F       T+P   I+SDVW  S + +    R+
Sbjct: 487 SLSVLNPSH-KFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRY 546

Query: 386 FVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSE 445
           +V F+D  TR TW+Y +  KS+V   F  F + +E +F  +I    SDNG EF    L E
Sbjct: 547 YVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWE 606

Query: 446 FLASKGIVHPNSCAYT-QQNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLIN 505
           + +  GI H  S  +T + N ++ERK+RH+++   +L+   S+P   W  A   A +LIN
Sbjct: 607 YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLIN 666

Query: 506 RMSSRILHLQTPLECLKESYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFV 565
           R+ + +L L++P + L  + P+        LRVFGC  Y      NQ K   +++ CVF+
Sbjct: 667 RLPTPLLQLESPFQKLFGTSPNYD-----KLRVFGCACYPWLRPYNQHKLDDKSRQCVFL 721

Query: 566 GYPL 569
           GY L
Sbjct: 727 GYSL 721

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 140.2 bits (352), Expect = 7.3e-32
Identity = 88/244 (36.07%), Postives = 129/244 (52.87%), Query Frame = 0


Query: 328 SVIAQSDVSSLSCDVCIRAKQHRVSFPSRPYKP--TQPFTLIHSDVWGPSKVTTSSGKRW 387
           S++   ++S   C+ C+  KQ R+ F     K    +P  ++HSDV GP    T   K +
Sbjct: 443 SLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNY 502

Query: 388 FVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSE 447
           FV F+D  T     YLI  KS+V ++FQ+F    E  F+ K+  L  DNGRE+ ++ + +
Sbjct: 503 FVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQ 562

Query: 448 FLASKGIVHPNSCAYTQQ-NRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLIN 507
           F   KGI +  +  +T Q N V+ER  R + + AR+++    L    WG+A+LTA +LIN
Sbjct: 563 FCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLIN 622

Query: 508 RMSSRIL--HLQTPLECLKESYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACV 567
           R+ SR L    +TP E      P  +      LRVFG T YVH     Q KF  ++   +
Sbjct: 623 RIPSRALVDSSKTPYEMWHNKKPYLK-----HLRVFGATVYVH-IKNKQGKFDDKSFKSI 680

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.3e-32
Identity = 81/232 (34.91%), Postives = 125/232 (53.88%), Query Frame = 0


Query: 338 LSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLT 397
           LSC  C   K H+V F +     ++P   I+SDVW  S + +    R++V F+D  TR T
Sbjct: 477 LSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYT 536

Query: 398 WVYLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNS 457
           W+Y +  KS+V   F  F   +E +F  +I  L SDNG EF    L ++L+  GI H  S
Sbjct: 537 WLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTS 596

Query: 458 CAYT-QQNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTP 517
             +T + N ++ERK+RH++++  +L+   S+P   W  A   A +LINR+ + +L LQ+P
Sbjct: 597 PPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSP 656

Query: 518 LECLKESYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPL 569
            + L    P+        L+VFGC  Y      N+ K   +++ C F+GY L
Sbjct: 657 FQKLFGQPPNYE-----KLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSL 700

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 7.8e-18
Identity = 59/188 (31.38%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 328 SVIAQSDVSSLSCDVCI--RAKQHRVSFPSR-PYKPT-QPFTLIHSDVWGPSKVTTSSGK 387
           S I  S+ S+  C  C+  ++ +HR    SR  Y+ + +PF  +H+D++GP      S  
Sbjct: 621 SDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAP 680

Query: 388 RWFVTFIDDHTRLTWVYLITDKSEVSA--IFQNFYHTIETQFHKKIAILLSDNGREFQNH 447
            +F++F D+ TR  WVY + D+ E S   +F +    I+ QF+ ++ ++  D G E+ N 
Sbjct: 681 SYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNK 740

Query: 448 NLSEFLASKGIVH-PNSCAYTQQNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAA 507
            L +F  ++GI     + A ++ + VAER NR LL   R+L+  + LP++LW  A+  + 
Sbjct: 741 TLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFST 800

Query: 508 HLINRMSS 509
            + N + S
Sbjct: 801 IIRNSLVS 808

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL
Match: A0A5A7TLC6 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001440 PE=4 SV=1)

HSP 1 Score: 960 bits (2482), Expect = 0.0
Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 0


Query: 103 MEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYAS 162
           MEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYAS
Sbjct: 1   MEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVNLTAHPIRFYAS 60

Query: 163 SSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKW 222
           SSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKW
Sbjct: 61  SSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGTGLTNTITDCGLKW 120

Query: 223 ASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKL 282
           ASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKL
Sbjct: 121 ASHRYPPVMDSHMFMVSGLIIPIGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKL 180

Query: 283 HGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDV 342
           HGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDV
Sbjct: 181 HGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSDVSSLSCDV 240

Query: 343 CIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 402
           CIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI
Sbjct: 241 CIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 300

Query: 403 TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQ 462
           TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQ
Sbjct: 301 TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYTQ 360

Query: 463 QNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKE 522
           QNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKE
Sbjct: 361 QNRVAERKNRHLLKVARSLMLSTSLPSYLWGDAILTAAHLINRMSSRILHLQTPLECLKE 420

Query: 523 SYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH 569
           SYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH
Sbjct: 421 SYPSTRLVSKVPLRVFGCTAYVHSFCPNQTKFTPRAQACVFVGYPLH 467

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL
Match: A0A5D3DR31 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00050 PE=4 SV=1)

HSP 1 Score: 634 bits (1635), Expect = 3.01e-213
Identity = 364/598 (60.87%), Postives = 385/598 (64.38%), Query Frame = 0


Query: 89  ISKTKTAVAA------VDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGA 148
           I++TKT  AA      VDTTMEKLLHRIQTPPIYPMGQ  PPS QLS Q+PIHA  LSGA
Sbjct: 17  ITRTKTVAAATSVTVAVDTTMEKLLHRIQTPPIYPMGQPLPPSTQLSNQKPIHASLLSGA 76

Query: 149 WAHAPPPVNLTAHPIRFYASSSVQPSHPSGHPPPHAPP---DSNLQNCQICTAMQICASI 208
           WAH P PVNLTAHPIRFYASS VQPSHPSGHP PH PP   + NLQNCQICT +QIC S 
Sbjct: 77  WAHTPSPVNLTAHPIRFYASSPVQPSHPSGHPSPHTPPIAVEHNLQNCQICTVVQICPST 136

Query: 209 LYSNLSAIGTGLTNTITDCGLKWASHRY-PPVMDSHMFMVS-GLIIPIGELSLN------ 268
           LYSNLSA+GTGLTNTITDCGLK A       +  + + M S   II +  +  N      
Sbjct: 137 LYSNLSALGTGLTNTITDCGLKRAVFEVNTSLTQTDLLMYSKNPIISLPNMPSNYITNFV 196

Query: 269 ---AQSLTHDNEKPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRET 328
              AQSLT+DNEKPILVCEHC+KQ HTKDRCWKLHG PPRGNKRS KEQQNLGRT VRET
Sbjct: 197 AFSAQSLTYDNEKPILVCEHCRKQWHTKDRCWKLHGWPPRGNKRSFKEQQNLGRTGVRET 256

Query: 329 ASTSQPIGPTASQTSCPTLSVIAQS----------------------------------- 388
            STSQPIGPTAS TS PTLS+IAQS                                   
Sbjct: 257 VSTSQPIGPTASLTSSPTLSIIAQSGMSQSFGLISVDGTNPWILNSRATNHLTGFSEHFV 316

Query: 389 ------------------------------------------------------------ 448
                                                                       
Sbjct: 317 TYTPCTGNEKIQIVDGSFAPIAGKGQIVLFDVFSLHNVLHVPKLSYNLLSIRRTIGTAWH 376

Query: 449 -------------------------------DVSSLSCDVCIRAKQHRVSFPSRPYKPTQ 508
                                          DVSSLSCDVCI AKQHRVSF S+ YKPTQ
Sbjct: 377 SKGLYILNDNTSGHPNFTYMKYLFPHLFLKIDVSSLSCDVCIGAKQHRVSFSSQLYKPTQ 436

Query: 509 PFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQ 539
           PFTLIHSDVWGPSKVTTSSGKRWFVTFI DHT LTWVYLITDKSEVSAIFQNFYHTIETQ
Sbjct: 437 PFTLIHSDVWGPSKVTTSSGKRWFVTFIHDHTHLTWVYLITDKSEVSAIFQNFYHTIETQ 496

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL
Match: A0A5A7UJZ2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00500 PE=4 SV=1)

HSP 1 Score: 606 bits (1563), Expect = 1.85e-201
Identity = 356/608 (58.55%), Postives = 377/608 (62.01%), Query Frame = 0


Query: 93  KTAVA-AVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPPVN 152
           KTAV  AVDTTMEKLLHRIQTPPIYPMGQ PPPSAQLS QEPIHA PLSGAWAHAP PVN
Sbjct: 21  KTAVTVAVDTTMEKLLHRIQTPPIYPMGQPPPPSAQLSSQEPIHALPLSGAWAHAPLPVN 80

Query: 153 LTAHPIRFYASSSVQPSHPSGHPPPHAPPDSN----LQNCQICTAMQICASILYSNLSAI 212
           LT H I FYAS  VQPSHPSGHPPP      N      N       ++ A   Y  L   
Sbjct: 81  LTTHSICFYASLPVQPSHPSGHPPPPIAARQNGADQHHNRLWIEVGELSAPSSYGQLYVH 140

Query: 213 GTGLTNTITDCGLKWASH--RYPPVMDSHMFMVSGLIIP----IGELSLNAQSLTHDNEK 272
           G G+ +T      + ++   +   +M S   ++  L +P       ++ +AQSLTHDNEK
Sbjct: 141 GLGINHTYRRAVFEVSTSLAQIDLLMSSKNPVILLLNVPSNYITNSVAFSAQSLTHDNEK 200

Query: 273 PILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTASQ 332
           PILV EHCKKQRHTKDRCWKLHGR PRGNKRSSKEQQNLGR DVRETASTSQPIGP ASQ
Sbjct: 201 PILVSEHCKKQRHTKDRCWKLHGRSPRGNKRSSKEQQNLGRIDVRETASTSQPIGPAASQ 260

Query: 333 TSCPTLSVIAQS------------------------------------------------ 392
           TS P+LSVIAQS                                                
Sbjct: 261 TSSPSLSVIAQSGISQSFGLISVDGTNPWILDSGATDHLTGFSEHFVTYTPCVDNEKVRI 320

Query: 393 ------------------------------------------------------------ 452
                                                                       
Sbjct: 321 ADGSLAPIATKGQIVLFNSFSLHNVLHDLNSGRTIGTARYSRGLYILNDDTFGHPNFTYM 380

Query: 453 -----------DVSSLSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSG 512
                      DVSSLSCD+CIRAKQHRVSFPS+PYKPTQPFTLIHSDVWGPSKVTTSS 
Sbjct: 381 KYLFSHLFLKIDVSSLSCDMCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSR 440

Query: 513 KRWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHN 569
           K WFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKI IL SDNGREFQNHN
Sbjct: 441 KMWFVTFIDDHTRLTWVYLITDKSEVSAIFQNFYHTIETQFHKKITILRSDNGREFQNHN 500

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL
Match: A0A5D3BQI5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00030 PE=4 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 7.29e-171
Identity = 330/665 (49.62%), Postives = 359/665 (53.98%), Query Frame = 0


Query: 89  ISKTKTAVAAVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPP 148
           I++TKTA AAVDTTMEKLL RIQTPPIYPMG+  PPS Q S Q+P+HAP LSGAWAHAP 
Sbjct: 86  ITQTKTA-AAVDTTMEKLLQRIQTPPIYPMGRPSPPSVQPSSQKPLHAPSLSGAWAHAPL 145

Query: 149 PVNLTAHPIRFYASSSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIG 208
            VNLT HPIRFYASS VQPSHPSGHPP H PP +  Q     + +   A+ LY++ +   
Sbjct: 146 FVNLTVHPIRFYASSLVQPSHPSGHPPLHVPPIAAKQQPSKLSNLYSSAN-LYNSANLYS 205

Query: 209 TGLTNTITD-----------------CGLKWASHRYP-----PVMDSHMFMVSGLI---- 268
           +  TN   D                  G+K      P     P  D  M+  + +I    
Sbjct: 206 S--TNLSVDPLQPFFYRNEADQYHNRLGIKAGESSAPFGYGQPYTDLPMYSKNPVISLSN 265

Query: 269 IP----IGELSLNAQSLTHDNEKPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQ 328
           +P       ++ +AQSLTHDN KPILVCE+CKKQRH KD+CWKLH RPPRGNKRSS EQQ
Sbjct: 266 VPSNYITNSVAFSAQSLTHDNGKPILVCEYCKKQRHIKDQCWKLHSRPPRGNKRSSNEQQ 325

Query: 329 NLGRTDVRETASTSQPIGPTASQTSCPTLSVIAQSD------------------------ 388
           NL RTD RE ASTSQ IG TAS+T+ PTLS IAQSD                        
Sbjct: 326 NLRRTDSRENASTSQSIGATASKTNSPTLSAIAQSDHLTGFSKHFVTYTPCAGNEKIWIA 385

Query: 389 ------------------------------------------------------------ 448
                                                                       
Sbjct: 386 DGSLASIAGKGQIVLYDGFSLQNVLHVPKLFYNLLSISKITHELHCKATFLPESVCFQDL 445

Query: 449 ------------------------------------------------------------ 508
                                                                       
Sbjct: 446 NSERTIGTARHSRGIYILNDDTSGSNISTTSLLSSYFSTSEHDFMLWHFRLGHPNITYMK 505

Query: 509 -----------VSSLSCDVCIRAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGK 567
                      VSSLSCDVCIRAKQHRVSFPS+PYKPTQPFTLIHSDVWGPSKVTTSSGK
Sbjct: 506 YLFPHLFLKIDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSGK 565

[Close]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL
Match: A0A5A7SG80 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00380 PE=3 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 1.06e-168
Identity = 330/588 (56.12%), Postives = 350/588 (59.52%), Query Frame = 0


Query: 90   SKTKTAVAAVDTTMEKLLHRIQTPPIYPMGQAPPPSAQLSGQEPIHAPPLSGAWAHAPPP 149
            +KT  A AAVDTTMEKLLHRIQTPPIYPMGQ PPPSAQL G+EPIHA PLSGAWAHAPPP
Sbjct: 491  TKTVAAAAAVDTTMEKLLHRIQTPPIYPMGQPPPPSAQLFGEEPIHALPLSGAWAHAPPP 550

Query: 150  VNLTAHPIRFYASSSVQPSHPSGHPPPHAPPDSNLQNCQICTAMQICASILYSNLSAIGT 209
            VNLTAHPIRFYASS VQPSH S H PPHAPP +  Q            S LYSN +   +
Sbjct: 551  VNLTAHPIRFYASSPVQPSHSSNHLPPHAPPIAAGQQPSKL-------SNLYSNANLYNS 610

Query: 210  GLTNTITDCGLKWASHRYPPVMDSHMFMVSGLIIPIGELS---------LNAQSLTHDNE 269
               N   D   + + +R    +D H    + L I +GE S         ++   + H   
Sbjct: 611  A--NLSVDPLQQPSCYRNE--VDQHH---NRLWIEVGEPSAPSSYGQPYVHGLGINHTYR 670

Query: 270  KPILVCEHCKKQRHTKDRCWKLHGRPPRGNKRSSKEQQNLGRTDVRETASTSQPIGPTAS 329
            + +   EHCKKQRH KDRCWKLHGRP RGNKRSSKEQQNLGRTDVRETASTSQPIGPTAS
Sbjct: 671  RAVF--EHCKKQRHAKDRCWKLHGRPLRGNKRSSKEQQNLGRTDVRETASTSQPIGPTAS 730

Query: 330  QTSCPTLSVIAQSD---------------------------------------VSSLSCD 389
            Q+S PTLSVIAQSD                                          L C 
Sbjct: 731  QSS-PTLSVIAQSDHLTGFSEHFVTYTPCAGNEKIRIVDGSLAPISGKDKYRITRELHCK 790

Query: 390  -------VCI-------------------------------------------------- 449
                   VC                                                   
Sbjct: 791  ATFLLEPVCFQDLNSGRTIGTARHSRGLYILNDDTFGSSISTTSLLSSYFSTSEHDFMLW 850

Query: 450  --RAKQHRVSFPSRPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLI 509
              RAK HRVSFPS+PYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTF DDHTRLTWVYLI
Sbjct: 851  HFRAK-HRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVTFTDDHTRLTWVYLI 910

Query: 510  TDKSEVSAIFQNFYHTIETQFHKKIAILLSDNGREFQNHNLSEFLASKGIVHPNSCAYT- 569
            TDKSE                                           GIVH NSCAYT 
Sbjct: 911  TDKSE-------------------------------------------GIVHQNSCAYTP 970

The following BLAST results are available for this feature:

BLAST of MELO.jh102160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043638.1	0.0	100.00	Beta-galactosidase [Cucumis melo var. makuwa] >TYK09725.1 Beta-galactosidase [Cu...	[more]
KAA0067153.1	6.22e-213	60.87	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK26002.1 putative m...	[more]
KAA0054937.1	3.81e-201	58.55	Beta-galactosidase [Cucumis melo var. makuwa] >TYK22726.1 Beta-galactosidase [Cu...	[more]
TYK02021.1	1.51e-170	49.62	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025138.1	2.19e-168	56.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of MELO.jh102160.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.2e-40	38.16	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	8.6e-33	35.25	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	7.3e-32	36.07	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	7.3e-32	34.91	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q12491	7.8e-18	31.38	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLC6	0.0	100.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G0...	[more]
A0A5D3DR31	3.01e-213	60.87	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7UJZ2	1.85e-201	58.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G...	[more]
A0A5D3BQI5	7.29e-171	49.62	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G0...	[more]
A0A5A7SG80	1.06e-168	56.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of MELO.jh102160.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 355..535 e-value: 1.7E-35 score: 124.1
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 361..460 e-value: 6.6E-14 score: 52.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 359..524 score: 19.191778
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..322
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 337..502
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 337..502
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 356..519

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102160.1.t1	MELO.jh102160.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding