Homology
BLAST of MELO.jh102109.1 vs. NCBI nr
Match:
KAA0041397.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1141 bits (2951), Expect = 0.0
Identity = 572/614 (93.16%), Postives = 582/614 (94.79%), Query Frame = 0
Query: 1 MRSSPVKPRARPLFPDGDFFFSPMGKH-FPGHTSKTLTRTTSDHFPIVLESSSISWGPPP 60
MRSSP L F FSP ++ FPGHTSKTLTRTTSDHFPIVLESSSISWGPPP
Sbjct: 1 MRSSPNLRAQATLSRLDRFLFSPQWENTFPGHTSKTLTRTTSDHFPIVLESSSISWGPPP 60
Query: 61 FRFTNAYLKDPDYKRNIEFWWGNTTNQA-AGT--LCAAKAMAMKIKAWGKEKKGKDEVSK 120
FRFTNAYLKDPDYKRNIEFWWGNT+ AG + K +AMKIKAWGKEKKGKDEVSK
Sbjct: 61 FRFTNAYLKDPDYKRNIEFWWGNTSQPGFAGYSFMRRLKQLAMKIKAWGKEKKGKDEVSK 120
Query: 121 KAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDEN 180
KAWIKEI+LIDKLEAEGTATEIHR KRLALKADLSQITLT+AQ+WAQKCKRIWVHEGDEN
Sbjct: 121 KAWIKEINLIDKLEAEGTATEIHRVKRLALKADLSQITLTEAQIWAQKCKRIWVHEGDEN 180
Query: 181 SSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRD 240
SSFFHKICT RQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDN D
Sbjct: 181 SSFFHKICTARQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNLD 240
Query: 241 WCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFK 300
WCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFK
Sbjct: 241 WCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFK 300
Query: 301 DFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDT 360
DFHSNHTINKVVNETLITLIAKK+NCETVSDF+PISLTTAIYKLIAKVLADRLKQTLP T
Sbjct: 301 DFHSNHTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTLPYT 360
Query: 361 ISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMK 420
ISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMK
Sbjct: 361 ISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMK 420
Query: 421 KNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLL 480
KNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLS FIFVLAMDYLSHLL
Sbjct: 421 KNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYLSHLL 480
Query: 481 INLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINL 540
INLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINL
Sbjct: 481 INLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINL 540
Query: 541 SKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLS 600
SKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLS
Sbjct: 541 SKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLS 600
Query: 601 SWKYSQLSKGGRIT 610
SWKYSQLSKGGRIT
Sbjct: 601 SWKYSQLSKGGRIT 614
BLAST of MELO.jh102109.1 vs. NCBI nr
Match:
TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1078 bits (2789), Expect = 0.0
Identity = 534/596 (89.60%), Postives = 556/596 (93.29%), Query Frame = 0
Query: 19 FFFSPMGKH-FPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTNAYLKDPDYKRNIE 78
F FS ++ FPGHTSK LTRTTSDHFPIVLESSSISWGP PFRFTNAYLKDPDYKRNIE
Sbjct: 127 FLFSTQWENIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDYKRNIE 186
Query: 79 FWWGNTTNQA-AGT--LCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGT 138
FWWGNT+ AG + K +AMKIKAWG+EKKGKDE SKKAWIKEIDLI+KLEAEGT
Sbjct: 187 FWWGNTSQPGFAGYSFMHRLKQLAMKIKAWGREKKGKDEASKKAWIKEIDLINKLEAEGT 246
Query: 139 ATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLIS 198
+TEIHR+KR+ALKADLSQITLT+AQ+WAQKCKRIWVHEGDENSSFFHKICT RQKKCLIS
Sbjct: 247 STEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLIS 306
Query: 199 KVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNE 258
K+IN CGQNCLNDSDIVDAFIQHFEEIYTDN+NS LFIDN DWCPISNTN LLDKPFNE
Sbjct: 307 KIINICGQNCLNDSDIVDAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSGLLDKPFNE 366
Query: 259 SEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLIT 318
+EIWLTLKSF KNKAPGPDGFTMDFLQKSWSFMK NICDIFKDFHSNHTINKVVNETLIT
Sbjct: 367 AEIWLTLKSFAKNKAPGPDGFTMDFLQKSWSFMKQNICDIFKDFHSNHTINKVVNETLIT 426
Query: 319 LIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAI 378
IAKK NCETV+DF+PISLTTAIYKLIAKVLADRLKQTLPDTISE QMAFVKGRQITEAI
Sbjct: 427 FIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTLPDTISESQMAFVKGRQITEAI 486
Query: 379 LIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSV 438
LIANEALD WRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYS KWR MIASCISSV
Sbjct: 487 LIANEALDLWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSQKWRKMIASCISSV 546
Query: 439 QYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNL 498
QYSILINGRPRGRIKP+RGIRQGDPLS FIFVLAMDYLS LL NLA+KGKINGVNFGPNL
Sbjct: 547 QYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKGKINGVNFGPNL 606
Query: 499 NLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSI 558
NLTHILFADDILIFVEDK+DYVSNLKMILHLFESASGLNINLSKSTIFPINVP DRANSI
Sbjct: 607 NLTHILFADDILIFVEDKDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPADRANSI 666
Query: 559 VDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 610
DSWGISKG LPT+YLGMPLGGKPSSSNFWDN+LQKIQKKLSSWKYSQLSKG RIT
Sbjct: 667 ADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGRRIT 722
BLAST of MELO.jh102109.1 vs. NCBI nr
Match:
KAA0044556.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1038 bits (2685), Expect = 0.0
Identity = 514/516 (99.61%), Postives = 515/516 (99.81%), Query Frame = 0
Query: 95 KAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQIT 154
K +AMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQIT
Sbjct: 5 KQLAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQIT 64
Query: 155 LTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAF 214
LTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAF
Sbjct: 65 LTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAF 124
Query: 215 IQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDG 274
IQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDG
Sbjct: 125 IQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDG 184
Query: 275 FTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLT 334
FTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLT
Sbjct: 185 FTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLT 244
Query: 335 TAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVI 394
TAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVI
Sbjct: 245 TAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVI 304
Query: 395 KLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGI 454
KLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGI
Sbjct: 305 KLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGI 364
Query: 455 RQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKED 514
RQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKED
Sbjct: 365 RQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKED 424
Query: 515 YVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPL 574
YVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPL
Sbjct: 425 YVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPL 484
Query: 575 GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 610
GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT
Sbjct: 485 GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 520
BLAST of MELO.jh102109.1 vs. NCBI nr
Match:
KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1032 bits (2668), Expect = 0.0
Identity = 510/598 (85.28%), Postives = 542/598 (90.64%), Query Frame = 0
Query: 16 DGDFFFSPMGKHFPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTNAYLKDPDYKRN 75
D F S FPGHTSK LTRTTSDHFPIVLESS+ISWGP PFRFTNAYLKDPDYK+N
Sbjct: 125 DRFLFTSQWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKN 184
Query: 76 IEFWWGNTTNQA-AGT--LCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAE 135
IEFWWGNT+ AG + K +A+ IK WG++KKGK+E SKKA IKEID IDKLEAE
Sbjct: 185 IEFWWGNTSQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDKLEAE 244
Query: 136 GTATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCL 195
G+ATEIHR+KR ALKADLSQI LT+AQ+WAQKCKRIWVHEGDENSSFFHKICT RQKKCL
Sbjct: 245 GSATEIHREKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCL 304
Query: 196 ISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPF 255
ISK+INN GQNCLNDSDI DAFIQHFE+IYTDN+NSQLFI+N DWCPISN N LLDKPF
Sbjct: 305 ISKIINNSGQNCLNDSDIADAFIQHFEDIYTDNRNSQLFIENLDWCPISNINSELLDKPF 364
Query: 256 NESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETL 315
NE+EIWLTLKSF KNKAPGPDG+ MDFLQKSWSFMK NICDIFKDFHS H INKVVNETL
Sbjct: 365 NEAEIWLTLKSFAKNKAPGPDGYAMDFLQKSWSFMKQNICDIFKDFHSTHIINKVVNETL 424
Query: 316 ITLIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITE 375
ITLIAKK +CET +DF+PISLTTAIYKLIAK LADRLKQTLPDTISE QMAFVKGRQITE
Sbjct: 425 ITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTLPDTISESQMAFVKGRQITE 484
Query: 376 AILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCIS 435
AILIANEALDFWR+KKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYS KWR MIASCIS
Sbjct: 485 AILIANEALDFWRSKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCIS 544
Query: 436 SVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGP 495
SVQYSILINGRPRGRIKP+RGIRQGDPLS FIFVLAMDYLS LL NLA+K KINGV F P
Sbjct: 545 SVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVKFSP 604
Query: 496 NLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAN 555
NLNLTHILFADDILIFVED++DYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRA
Sbjct: 605 NLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAK 664
Query: 556 SIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 610
SI DSWGISKG LPT+YLGMPLGG+PSSSNFWDN+LQKIQKKLS+WKYSQLSKGGRIT
Sbjct: 665 SIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKIQKKLSNWKYSQLSKGGRIT 722
BLAST of MELO.jh102109.1 vs. NCBI nr
Match:
TYK29577.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 716 bits (1847), Expect = 6.38e-250
Identity = 349/398 (87.69%), Postives = 370/398 (92.96%), Query Frame = 0
Query: 28 FPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTNAYLKDPDYKRNIEFWWGNTTNQA 87
FPGHTSK LTRTTSDHFPIVLESS+ISWGP PFRFTNAYLKDPDYK+NIEFWWGNT+
Sbjct: 341 FPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPG 400
Query: 88 -AGT--LCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRL 147
AG + K +A+KIKAWG+EKKGK+E SKKAWIKEIDLIDKLEAEG+ATEIHR+KR+
Sbjct: 401 YAGYSFMHRLKQLALKIKAWGREKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRI 460
Query: 148 ALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNC 207
ALKADLSQITLT+AQ+WAQKCKRIWVHEGDENSSFFHKICT RQKKCLISK+INN GQNC
Sbjct: 461 ALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNC 520
Query: 208 LNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSF 267
LNDSDI DAFIQHFEEIYTDN+NS LFIDN DWCPISNTN LLDKPFNE+EIWLTLKSF
Sbjct: 521 LNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSF 580
Query: 268 TKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCET 327
KNKAPGPDG+TMDFLQKSWSFMK NICDIFKDFHS HTINKVVNETLITLIAKK NCET
Sbjct: 581 AKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCET 640
Query: 328 VSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFW 387
V+DF+PISLTTAIYKLIAK LADRLKQTLPDTISE QMAFVKGR+ITEAILIANEALDFW
Sbjct: 641 VADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFW 700
Query: 388 RNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPK 422
RNKKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYS K
Sbjct: 701 RNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQK 738
BLAST of MELO.jh102109.1 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 6.4e-34
Identity = 126/479 (26.30%), Postives = 226/479 (47.18%), Query Frame = 0
Query: 152 QITLTKAQMWAQKCKRIWVHEGDENSSFFHKI--------CTTRQK--KCLISKVINNCG 211
+IT +A++ + KRI S FF KI TR+K K LIS + N
Sbjct: 338 EITKIRAELNEIENKRIIQQINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGND 397
Query: 212 QNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDN-RDWCPISNTNRC---LLDKPFNESEI 271
+ + S+I ++++++Y+ + ID + C + ++ +L++P + SEI
Sbjct: 398 EITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEI 457
Query: 272 WLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIA 331
T+++ K K+PGPDGFT +F Q + + ++F++ + E ITLI
Sbjct: 458 ASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIP 517
Query: 332 KKNNCET-VSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQ----ITE 391
K T +++PISL K++ K+L +R++Q + I Q+ F+ G Q I +
Sbjct: 518 KPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRK 577
Query: 392 AILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCIS 451
+I + + ++ +NK ++ +D EKAFD + F+ L K + +I + S
Sbjct: 578 SINVI-QHINKLKNKDH--MILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYS 637
Query: 452 SVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGP 511
+I++NG G RQG PLS +F + M+ L+ I + E+ I G++ G
Sbjct: 638 KPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLA---IAIREEKAIKGIHIGS 697
Query: 512 NLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAN 571
+ LFADD+++++E+ D + L ++ + + SG IN KS F
Sbjct: 698 E-EIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEK 757
Query: 572 SIVDSWGISKGQLPTTYLGMPL--GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRI 610
++ DS + YLG+ L K ++ + ++I + ++ WK S GRI
Sbjct: 758 TVKDSIPFTVVPKKMKYLGVYLTKDVKDLYKENYETLRKEIAEDVNKWKNIPCSWLGRI 809
BLAST of MELO.jh102109.1 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 5.4e-33
Identity = 139/609 (22.82%), Postives = 262/609 (43.02%), Query Frame = 0
Query: 33 SKTLTRTTSDHFPIVLE--------SSSISWGPPPFRFTNAYLKD----PDYKRNIEFWW 92
++ +T SDH I LE S S +W + N L D + K I+ ++
Sbjct: 220 TEIITNYLSDHSAIKLELRIKNLTQSRSTTW-----KLNNLLLNDYWVHNEMKAEIKMFF 279
Query: 93 GNTTNQ---------AAGTLCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEA 152
N+ A +C K +A+ +E+ D ++ + +KE++ ++ +
Sbjct: 280 ETNENKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLTSQ--LKELEKQEQTHS 339
Query: 153 EGTATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKC 212
+ + R + ++A+L +I K + + + ++ ++ +++K
Sbjct: 340 KAS----RRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKN 399
Query: 213 LISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDN----KNSQLFIDNRDWCPISNTNRCL 272
I + N+ G + ++I ++++ +Y + + F+D ++
Sbjct: 400 QIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVES 459
Query: 273 LDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKV 332
L++P SEI + S K+PGPDGFT +F Q+ + + +F+ +
Sbjct: 460 LNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNS 519
Query: 333 VNETLITLIAKKNNCETVSD-FQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVK 392
E I LI K T + F+PISL K++ K+LA+R++Q + I Q+ F+
Sbjct: 520 FYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIP 579
Query: 393 GRQ----ITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPK 452
G Q I ++I N R K + +I +D EKAFDK+ F+ L K
Sbjct: 580 GMQGWFNIRKSI---NVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGM 639
Query: 453 WRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEK 512
+ +I + +I++NG+ G RQG PLS +F + ++ L+ + ++
Sbjct: 640 YLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARA---IRQE 699
Query: 513 GKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIF 572
+I G+ G + LFADD+++++E+ NL ++ F SG IN+ KS F
Sbjct: 700 KEIKGIQLGKE-EVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAF 759
Query: 573 PINVPTDRANSIVDSWGISKGQLPTTYLGMPL--GGKPSSSNFWDNILQKIQKKLSSWKY 610
N + I+ + YLG+ L K + +L++I++ + WK
Sbjct: 760 LYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKN 810
BLAST of MELO.jh102109.1 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 140.6 bits (353), Expect = 6.0e-32
Identity = 138/591 (23.35%), Postives = 255/591 (43.15%), Query Frame = 0
Query: 41 SDHFPI-VLESSSISWGPPPF--RFTNAYLKDPDYKRNI--------EFWWGNTTNQAAG 100
SDH + ++ +++I+ G P F + N L D K I EF T
Sbjct: 235 SDHHGLRLIFNNNINNGKPTFTWKLNNTLLNDTLVKEGIKKEIKDFLEFNENEATTYPNL 294
Query: 101 TLCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKAD 160
+ K+ A KK ++ + + ++K EA + R + + L+ +
Sbjct: 295 WDTMKAFLRGKLIALSASKKKRETAHTSSLTTHLKALEKKEA-NSPKRSRRQEIIKLRGE 354
Query: 161 LSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSD 220
++Q+ + + + + + ++ ++ + K LI+K+ N G + +
Sbjct: 355 INQVETRRTIQRINQTRSWFFEKINKIDKPLARLTKGHRDKILINKIRNEKGDITTDPEE 414
Query: 221 IVDAFIQHFEEIYTDNKNS----QLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFT 280
I + ++ +Y+ + F+D ++ L+ P + EI + S
Sbjct: 415 IQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLP 474
Query: 281 KNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHS---NHTINKVVNETLITLIAKKNNC 340
K+PGPDGF+ +F Q +F + I + K FH T+ E ITLI K
Sbjct: 475 TKKSPGPDGFSAEFYQ---TFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKD 534
Query: 341 ET-VSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEAL 400
T + +F+PISL K++ K+LA+R+++ + I Q+ F+ G Q I + +
Sbjct: 535 PTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVI 594
Query: 401 DFWRNKKERG-FVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILI 460
+ K++ +I LD EKAFDK+ F+ +L + + NMI + S +I +
Sbjct: 595 HYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKV 654
Query: 461 NGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHIL 520
NG I G RQG PLS ++F + ++ L+ + ++ +I G+ G + L
Sbjct: 655 NGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARA---IRQQKEIKGIQIGKE-EVKISL 714
Query: 521 FADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGI 580
ADD+++++ D ++ L +++ F G IN +KS F I ++
Sbjct: 715 LADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPF 774
Query: 581 SKGQLPTTYLGMPLGG--KPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRI 610
S YLG+ L K + ++ ++I++ L WK S GRI
Sbjct: 775 SIVTNNIKYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRI 817
BLAST of MELO.jh102109.1 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 5.4e-25
Identity = 77/302 (25.50%), Postives = 149/302 (49.34%), Query Frame = 0
Query: 240 ISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFH 299
+S + L+ P E+ L+ NK+PG DG T++F Q W + + + +
Sbjct: 437 VSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAF 496
Query: 300 SNHTINKVVNETLITLIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISE 359
+ +++L+ KK + + +++P+SL + YK++AK ++ RLK L + I
Sbjct: 497 KKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHP 556
Query: 360 LQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNY 419
Q V GR I + + + + L F R + LD EKAFD+++ +++ L ++
Sbjct: 557 DQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSF 616
Query: 420 SPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINL 479
P++ + + +S + + IN + RG+RQG PLS ++ LA++ LL
Sbjct: 617 GPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLL--- 676
Query: 480 AEKGKING-VNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSK 539
+ ++ G V P++ + +ADD+++ +D D + + ++ +AS IN SK
Sbjct: 677 --RKRLTGLVLKEPDMRVVLSAYADDVILVAQDLVD-LERAQECQEVYAAASSARINWSK 732
Query: 540 ST 541
S+
Sbjct: 737 SS 732
BLAST of MELO.jh102109.1 vs. ExPASy Swiss-Prot
Match:
Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 1.5e-14
Identity = 76/295 (25.76%), Postives = 136/295 (46.10%), Query Frame = 0
Query: 250 KPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVV- 309
+P EI +K + K APG DG T+ + ++ + ++F H + V
Sbjct: 4 RPIAREEIQCAIKGW-KPSAPGSDGLTVQAITRT---------RLPRNFVQLHLLRGHVP 63
Query: 310 ---NETLITLIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFV 369
TLI K + E S+++PI++ +A+ +L+ ++LA RL+ + ++ A +
Sbjct: 64 TPWTAMRTTLIPKDGDLENPSNWRPITIASALQRLLHRILAKRLEAAVELHPAQKGYARI 123
Query: 370 KGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRN 429
G + L+ + + R +++ V+ LD+ KAFD ++ I L + N
Sbjct: 124 DGTLVNS--LLLDTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTSN 183
Query: 430 MIASCISSVQYSILIN-GRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGK 489
I +S +I + G +I RG++QGDPLS F+F +D LL +L
Sbjct: 184 YITGSLSDSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLD---ELLCSLQSTPG 243
Query: 490 INGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKS 540
I G G + + FADD+L+ +ED + + + F G+++N KS
Sbjct: 244 IGG-TIGEE-KIPVLAFADDLLL-LEDNDVLLPTTLATVANFFRLRGMSLNAKKS 280
BLAST of MELO.jh102109.1 vs. ExPASy TrEMBL
Match:
A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1)
HSP 1 Score: 1141 bits (2951), Expect = 0.0
Identity = 572/614 (93.16%), Postives = 582/614 (94.79%), Query Frame = 0
Query: 1 MRSSPVKPRARPLFPDGDFFFSPMGKH-FPGHTSKTLTRTTSDHFPIVLESSSISWGPPP 60
MRSSP L F FSP ++ FPGHTSKTLTRTTSDHFPIVLESSSISWGPPP
Sbjct: 1 MRSSPNLRAQATLSRLDRFLFSPQWENTFPGHTSKTLTRTTSDHFPIVLESSSISWGPPP 60
Query: 61 FRFTNAYLKDPDYKRNIEFWWGNTTNQA-AGT--LCAAKAMAMKIKAWGKEKKGKDEVSK 120
FRFTNAYLKDPDYKRNIEFWWGNT+ AG + K +AMKIKAWGKEKKGKDEVSK
Sbjct: 61 FRFTNAYLKDPDYKRNIEFWWGNTSQPGFAGYSFMRRLKQLAMKIKAWGKEKKGKDEVSK 120
Query: 121 KAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDEN 180
KAWIKEI+LIDKLEAEGTATEIHR KRLALKADLSQITLT+AQ+WAQKCKRIWVHEGDEN
Sbjct: 121 KAWIKEINLIDKLEAEGTATEIHRVKRLALKADLSQITLTEAQIWAQKCKRIWVHEGDEN 180
Query: 181 SSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRD 240
SSFFHKICT RQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDN D
Sbjct: 181 SSFFHKICTARQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNLD 240
Query: 241 WCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFK 300
WCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFK
Sbjct: 241 WCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFK 300
Query: 301 DFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDT 360
DFHSNHTINKVVNETLITLIAKK+NCETVSDF+PISLTTAIYKLIAKVLADRLKQTLP T
Sbjct: 301 DFHSNHTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTLPYT 360
Query: 361 ISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMK 420
ISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMK
Sbjct: 361 ISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMK 420
Query: 421 KNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLL 480
KNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLS FIFVLAMDYLSHLL
Sbjct: 421 KNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYLSHLL 480
Query: 481 INLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINL 540
INLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINL
Sbjct: 481 INLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINL 540
Query: 541 SKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLS 600
SKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLS
Sbjct: 541 SKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLS 600
Query: 601 SWKYSQLSKGGRIT 610
SWKYSQLSKGGRIT
Sbjct: 601 SWKYSQLSKGGRIT 614
BLAST of MELO.jh102109.1 vs. ExPASy TrEMBL
Match:
A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1)
HSP 1 Score: 1078 bits (2789), Expect = 0.0
Identity = 534/596 (89.60%), Postives = 556/596 (93.29%), Query Frame = 0
Query: 19 FFFSPMGKH-FPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTNAYLKDPDYKRNIE 78
F FS ++ FPGHTSK LTRTTSDHFPIVLESSSISWGP PFRFTNAYLKDPDYKRNIE
Sbjct: 127 FLFSTQWENIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDYKRNIE 186
Query: 79 FWWGNTTNQA-AGT--LCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGT 138
FWWGNT+ AG + K +AMKIKAWG+EKKGKDE SKKAWIKEIDLI+KLEAEGT
Sbjct: 187 FWWGNTSQPGFAGYSFMHRLKQLAMKIKAWGREKKGKDEASKKAWIKEIDLINKLEAEGT 246
Query: 139 ATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLIS 198
+TEIHR+KR+ALKADLSQITLT+AQ+WAQKCKRIWVHEGDENSSFFHKICT RQKKCLIS
Sbjct: 247 STEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLIS 306
Query: 199 KVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNE 258
K+IN CGQNCLNDSDIVDAFIQHFEEIYTDN+NS LFIDN DWCPISNTN LLDKPFNE
Sbjct: 307 KIINICGQNCLNDSDIVDAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSGLLDKPFNE 366
Query: 259 SEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLIT 318
+EIWLTLKSF KNKAPGPDGFTMDFLQKSWSFMK NICDIFKDFHSNHTINKVVNETLIT
Sbjct: 367 AEIWLTLKSFAKNKAPGPDGFTMDFLQKSWSFMKQNICDIFKDFHSNHTINKVVNETLIT 426
Query: 319 LIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAI 378
IAKK NCETV+DF+PISLTTAIYKLIAKVLADRLKQTLPDTISE QMAFVKGRQITEAI
Sbjct: 427 FIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTLPDTISESQMAFVKGRQITEAI 486
Query: 379 LIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSV 438
LIANEALD WRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYS KWR MIASCISSV
Sbjct: 487 LIANEALDLWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSQKWRKMIASCISSV 546
Query: 439 QYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNL 498
QYSILINGRPRGRIKP+RGIRQGDPLS FIFVLAMDYLS LL NLA+KGKINGVNFGPNL
Sbjct: 547 QYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKGKINGVNFGPNL 606
Query: 499 NLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSI 558
NLTHILFADDILIFVEDK+DYVSNLKMILHLFESASGLNINLSKSTIFPINVP DRANSI
Sbjct: 607 NLTHILFADDILIFVEDKDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPADRANSI 666
Query: 559 VDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 610
DSWGISKG LPT+YLGMPLGGKPSSSNFWDN+LQKIQKKLSSWKYSQLSKG RIT
Sbjct: 667 ADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGRRIT 722
BLAST of MELO.jh102109.1 vs. ExPASy TrEMBL
Match:
A0A5A7TR15 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003050 PE=4 SV=1)
HSP 1 Score: 1038 bits (2685), Expect = 0.0
Identity = 514/516 (99.61%), Postives = 515/516 (99.81%), Query Frame = 0
Query: 95 KAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQIT 154
K +AMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQIT
Sbjct: 5 KQLAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQIT 64
Query: 155 LTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAF 214
LTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAF
Sbjct: 65 LTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAF 124
Query: 215 IQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDG 274
IQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDG
Sbjct: 125 IQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDG 184
Query: 275 FTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLT 334
FTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLT
Sbjct: 185 FTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLT 244
Query: 335 TAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVI 394
TAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVI
Sbjct: 245 TAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVI 304
Query: 395 KLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGI 454
KLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGI
Sbjct: 305 KLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGI 364
Query: 455 RQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKED 514
RQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKED
Sbjct: 365 RQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKED 424
Query: 515 YVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPL 574
YVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPL
Sbjct: 425 YVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPL 484
Query: 575 GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 610
GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT
Sbjct: 485 GGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 520
BLAST of MELO.jh102109.1 vs. ExPASy TrEMBL
Match:
A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)
HSP 1 Score: 1032 bits (2668), Expect = 0.0
Identity = 510/598 (85.28%), Postives = 542/598 (90.64%), Query Frame = 0
Query: 16 DGDFFFSPMGKHFPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTNAYLKDPDYKRN 75
D F S FPGHTSK LTRTTSDHFPIVLESS+ISWGP PFRFTNAYLKDPDYK+N
Sbjct: 125 DRFLFTSQWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKN 184
Query: 76 IEFWWGNTTNQA-AGT--LCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAE 135
IEFWWGNT+ AG + K +A+ IK WG++KKGK+E SKKA IKEID IDKLEAE
Sbjct: 185 IEFWWGNTSQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDKLEAE 244
Query: 136 GTATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCL 195
G+ATEIHR+KR ALKADLSQI LT+AQ+WAQKCKRIWVHEGDENSSFFHKICT RQKKCL
Sbjct: 245 GSATEIHREKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCL 304
Query: 196 ISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPF 255
ISK+INN GQNCLNDSDI DAFIQHFE+IYTDN+NSQLFI+N DWCPISN N LLDKPF
Sbjct: 305 ISKIINNSGQNCLNDSDIADAFIQHFEDIYTDNRNSQLFIENLDWCPISNINSELLDKPF 364
Query: 256 NESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETL 315
NE+EIWLTLKSF KNKAPGPDG+ MDFLQKSWSFMK NICDIFKDFHS H INKVVNETL
Sbjct: 365 NEAEIWLTLKSFAKNKAPGPDGYAMDFLQKSWSFMKQNICDIFKDFHSTHIINKVVNETL 424
Query: 316 ITLIAKKNNCETVSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITE 375
ITLIAKK +CET +DF+PISLTTAIYKLIAK LADRLKQTLPDTISE QMAFVKGRQITE
Sbjct: 425 ITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTLPDTISESQMAFVKGRQITE 484
Query: 376 AILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPKWRNMIASCIS 435
AILIANEALDFWR+KKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYS KWR MIASCIS
Sbjct: 485 AILIANEALDFWRSKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCIS 544
Query: 436 SVQYSILINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGP 495
SVQYSILINGRPRGRIKP+RGIRQGDPLS FIFVLAMDYLS LL NLA+K KINGV F P
Sbjct: 545 SVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVKFSP 604
Query: 496 NLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAN 555
NLNLTHILFADDILIFVED++DYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRA
Sbjct: 605 NLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAK 664
Query: 556 SIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLSSWKYSQLSKGGRIT 610
SI DSWGISKG LPT+YLGMPLGG+PSSSNFWDN+LQKIQKKLS+WKYSQLSKGGRIT
Sbjct: 665 SIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKIQKKLSNWKYSQLSKGGRIT 722
BLAST of MELO.jh102109.1 vs. ExPASy TrEMBL
Match:
A0A5D3E0F6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001830 PE=4 SV=1)
HSP 1 Score: 716 bits (1847), Expect = 3.09e-250
Identity = 349/398 (87.69%), Postives = 370/398 (92.96%), Query Frame = 0
Query: 28 FPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTNAYLKDPDYKRNIEFWWGNTTNQA 87
FPGHTSK LTRTTSDHFPIVLESS+ISWGP PFRFTNAYLKDPDYK+NIEFWWGNT+
Sbjct: 341 FPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPG 400
Query: 88 -AGT--LCAAKAMAMKIKAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRL 147
AG + K +A+KIKAWG+EKKGK+E SKKAWIKEIDLIDKLEAEG+ATEIHR+KR+
Sbjct: 401 YAGYSFMHRLKQLALKIKAWGREKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRI 460
Query: 148 ALKADLSQITLTKAQMWAQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNC 207
ALKADLSQITLT+AQ+WAQKCKRIWVHEGDENSSFFHKICT RQKKCLISK+INN GQNC
Sbjct: 461 ALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNC 520
Query: 208 LNDSDIVDAFIQHFEEIYTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSF 267
LNDSDI DAFIQHFEEIYTDN+NS LFIDN DWCPISNTN LLDKPFNE+EIWLTLKSF
Sbjct: 521 LNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSF 580
Query: 268 TKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCET 327
KNKAPGPDG+TMDFLQKSWSFMK NICDIFKDFHS HTINKVVNETLITLIAKK NCET
Sbjct: 581 AKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCET 640
Query: 328 VSDFQPISLTTAIYKLIAKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFW 387
V+DF+PISLTTAIYKLIAK LADRLKQTLPDTISE QMAFVKGR+ITEAILIANEALDFW
Sbjct: 641 VADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFW 700
Query: 388 RNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSPK 422
RNKKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYS K
Sbjct: 701 RNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQK 738
BLAST of MELO.jh102109.1 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 82.0 bits (201), Expect = 1.8e-15
Identity = 83/350 (23.71%), Postives = 143/350 (40.86%), Query Frame = 0
Query: 4 SPVKPRARPLFPDGDFFFSPMGKHFPGHTSKTLTRTTSDHFP-IVLESSSISWGPPPFRF 63
+P+ + +GD+F S FP + SDH P I++ + FR+
Sbjct: 280 NPIIRKLDRAIANGDWFSS-----FPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRY 339
Query: 64 TNAYLKDPDYKRNIEFWW------GNTTNQAAGTLCAAKAMAMKIKAWGKEKKGKDEVSK 123
+ P + ++ W G+ L AAK K ++ G +
Sbjct: 340 FSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCC---KLLNRQGFGNIQHKT 399
Query: 124 KAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQITLTKAQMWAQKCKRIWVHEGDEN 183
K + ++ I + + R + +A K + + QK + W+ +GD N
Sbjct: 400 KEALDSLESIQSQLLTNPSDSLFRVEHVARK-KWNFFAAALESFYRQKSRIKWLQDGDAN 459
Query: 184 SSFFHKICTTRQKKCLISKVINNCG---QNCLNDSDIVDAFIQHFEEIYTDNKNSQLFID 243
+ FFHK+ Q K LI + + +N +++ A+ H +D
Sbjct: 460 TRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQR 519
Query: 244 NRDWCPI--SNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNI 303
+D P ++T L ++ EI + + +NKAPGPD FT +F +SW +K +
Sbjct: 520 IKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDST 579
Query: 304 CDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLTTAIYKLI 342
K+F + K N T ITLI K + +S F+P+S T +YK+I
Sbjct: 580 IAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620
BLAST of MELO.jh102109.1 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 68.9 bits (167), Expect = 1.6e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 439 LINGRPRGRIKPTRGIRQGDPLSSFIFVLAMDYLSHLLINLAEKGKINGVNFGPNL-NLT 498
+ING P+G + P+RG+RQGDPLS ++F+L + LS L E+G++ G+ N +
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 499 HILFADD 505
H+LFADD
Sbjct: 73 HLLFADD 79
BLAST of MELO.jh102109.1 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 53.9 bits (128), Expect = 5.2e-07
Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0
Query: 345 LADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKK--ERGFVIKLDIEKAF 404
+ +RLK + + I Q +F+ GR T+ I+ EA+ R KK + ++KLD+EKA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 405 DKLNWRFIDFMLMKKNYSPKWRNMIA 429
D++ W +++ L+ + W IA
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWLPEIA 86
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0041397.1 | 0.0 | 93.16 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYJ99326.1 | 0.0 | 89.60 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0044556.1 | 0.0 | 99.61 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0039950.1 | 0.0 | 85.28 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245... | [more] |
TYK29577.1 | 6.38e-250 | 87.69 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P08548 | 6.4e-34 | 26.30 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
O00370 | 5.4e-33 | 22.82 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P11369 | 6.0e-32 | 23.35 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P14381 | 5.4e-25 | 25.50 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Q03274 | 1.5e-14 | 25.76 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TIB8 | 0.0 | 93.16 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BJP3 | 0.0 | 89.60 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TR15 | 0.0 | 99.61 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7T9I7 | 0.0 | 85.28 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3E0F6 | 3.09e-250 | 87.69 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |