MELO.jh101804.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101804.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr06: 10976299 .. 10976919 (+)
RNA-Seq Expression	MELO.jh101804.1
Synteny	MELO.jh101804.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGAGAGGTGGCAGGTTTTGTCAGTAGGTGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTGCAGCCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTACAGGACTGCCCAGGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACAAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTAAAACTGCATGGCATACCTGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCAAAGTTCTGGAAAGAACTTCAACTTGCTTTAGGCACGAGGTTAGACTTCAGCACGGCTTTCCACCCTCAAACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCATGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATCTGATGGAGTTCGCTTATAATAACAGCTACCAGGCTACTATCGATATGGCACCGTTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGTGAGTAG

mRNA sequence

ATGAAGAGAGAGGTGGCAGGTTTTGTCAGTAGGTGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTGCAGCCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTACAGGACTGCCCAGGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACAAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTAAAACTGCATGGCATACCTGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCAAAGTTCTGGAAAGAACTTCAACTTGCTTTAGGCACGAGGTTAGACTTCAGCACGGCTTTCCACCCTCAAACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCATGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATCTGATGGAGTTCGCTTATAATAACAGCTACCAGGCTACTATCGATATGGCACCGTTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGTGAGTAG

Coding sequence (CDS)

ATGAAGAGAGAGGTGGCAGGTTTTGTCAGTAGGTGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTGCAGCCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTACAGGACTGCCCAGGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACAAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTAAAACTGCATGGCATACCTGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCAAAGTTCTGGAAAGAACTTCAACTTGCTTTAGGCACGAGGTTAGACTTCAGCACGGCTTTCCACCCTCAAACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCATGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATCTGATGGAGTTCGCTTATAATAACAGCTACCAGGCTACTATCGATATGGCACCGTTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGTGAGTAG

Protein sequence

MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQLALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFEALYGKCCRSPVCWGEVGE

Homology

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BLAST of MELO.jh101804.1 vs. NCBI nr
Match: TYK18679.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 415 bits (1067), Expect = 9.40e-146
Identity = 194/206 (94.17%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKREVA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 1   MKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 60

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SDRD RFTSKFWK LQ
Sbjct: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQ 120

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQT+RLNQ+LEDMLRAC+LEFSGSWDSHLHLMEFAYNNSYQA
Sbjct: 121 LALGTRLDFSTAFHPQTDGQTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA 180

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 181 TIGMAPFEALYGKCCRSPVCWGEVGE 206

[Close]

BLAST of MELO.jh101804.1 vs. NCBI nr
Match: KAA0063083.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 417 bits (1072), Expect = 1.16e-145
Identity = 195/206 (94.66%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           M REVA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 67  MMREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 126

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SDRDARFTSKFWK LQ
Sbjct: 127 WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQ 186

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRAC+LEFSGSWDSHLHLMEFAYNNSYQA
Sbjct: 187 LALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA 246

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 247 TIGMAPFEALYGKCCRSPVCWGEVGE 272

[Close]

BLAST of MELO.jh101804.1 vs. NCBI nr
Match: KAA0031853.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1070), Expect = 4.69e-144
Identity = 194/206 (94.17%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKR+VA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 14  MKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 73

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKST+TASKWGQLYMTEIV+LHG+PVSI+SDRDARFTSKFWK LQ
Sbjct: 74  WVVVDRLTKSAHFVPGKSTHTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQ 133

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRAC+LEFSGSWDSHLHLMEFAYNNSYQA
Sbjct: 134 LALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA 193

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 194 TIGMAPFEALYGKCCRSPVCWGEVGE 219

[Close]

BLAST of MELO.jh101804.1 vs. NCBI nr
Match: KAA0032302.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1069), Expect = 1.51e-143
Identity = 194/206 (94.17%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKREVA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 21  MKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 80

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SDRDARFTSKFWK LQ
Sbjct: 81  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQ 140

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLR C+LEF GSWDSHLHLMEFAYNNSYQA
Sbjct: 141 LALGTRLDFSTAFHPQTDGQTERLNQILEDMLRVCVLEFPGSWDSHLHLMEFAYNNSYQA 200

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 201 TIGMAPFEALYGKCCRSPVCWGEVGE 226

[Close]

BLAST of MELO.jh101804.1 vs. NCBI nr
Match: TYK28167.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1069), Expect = 3.87e-143
Identity = 194/206 (94.17%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKREVA FVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLP+TLKGY VI
Sbjct: 49  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYKVI 108

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SD+DARFTSKFWK LQ
Sbjct: 109 WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDKDARFTSKFWKGLQ 168

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDF+TAFHPQTDGQTERLNQVLEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQA
Sbjct: 169 LALGTRLDFNTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFSYNNSYQA 228

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 229 TIGMAPFEALYGKCCRSPVCWGEVGE 254

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-36
Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 0


Query: 1    MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
            ++  +  ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMDF+TGLP T     +I
Sbjct: 1157 LQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMI 1216

Query: 61   WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
             VVVDR +K AHF+  + T  A++   L    I   HG P +I SDRD R T+  ++EL 
Sbjct: 1217 LVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELT 1276

Query: 121  LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
              LG +   S+A HPQTDGQ+ER  Q L  +LRA +     +W  +L  +EF YN++   
Sbjct: 1277 KRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTR 1336

Query: 181  TIDMAPFEALYGKCCRSP 199
            T+  +PFE   G    +P
Sbjct: 1337 TLGKSPFEIDLGYLPNTP 1354

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36
Identity = 78/198 (39.39%), Postives = 112/198 (56.57%), Query Frame = 0


Query: 1    MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
            ++  +  ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMDF+TGLP T     +I
Sbjct: 1131 LQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMI 1190

Query: 61   WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
             VVVDR +K AHF+  + T  A++   L    I   HG P +I SDRD R T+  ++EL 
Sbjct: 1191 LVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELT 1250

Query: 121  LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
              LG +   S+A HPQTDGQ+ER  Q L  +LRA       +W  +L  +EF YN++   
Sbjct: 1251 KRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTR 1310

Query: 181  TIDMAPFEALYGKCCRSP 199
            T+  +PFE   G    +P
Sbjct: 1311 TLGKSPFEIDLGYLPNTP 1328

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 70/191 (36.65%), Postives = 108/191 (56.54%), Query Frame = 0


Query: 1    MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
            +++++  +V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  GY  +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNAL 1005

Query: 61   WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
            +VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK+  
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
                  + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  TIDMAPFEALY 192
               M PFE ++
Sbjct: 1126 ATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 70/191 (36.65%), Postives = 108/191 (56.54%), Query Frame = 0


Query: 1    MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
            +++++  +V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  GY  +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNAL 1005

Query: 61   WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
            +VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK+  
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
                  + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  TIDMAPFEALY 192
               M PFE ++
Sbjct: 1126 ATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 70/191 (36.65%), Postives = 108/191 (56.54%), Query Frame = 0


Query: 1    MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
            +++++  +V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  GY  +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNAL 1005

Query: 61   WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
            +VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK+  
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
                  + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  TIDMAPFEALY 192
               M PFE ++
Sbjct: 1126 ATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL
Match: A0A5D3D562 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00170 PE=4 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 4.55e-146
Identity = 194/206 (94.17%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKREVA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 1   MKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 60

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SDRD RFTSKFWK LQ
Sbjct: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQ 120

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQT+RLNQ+LEDMLRAC+LEFSGSWDSHLHLMEFAYNNSYQA
Sbjct: 121 LALGTRLDFSTAFHPQTDGQTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA 180

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 181 TIGMAPFEALYGKCCRSPVCWGEVGE 206

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL
Match: A0A5A7V4U5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14343G00020 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 5.61e-146
Identity = 195/206 (94.66%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           M REVA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 67  MMREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 126

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SDRDARFTSKFWK LQ
Sbjct: 127 WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQ 186

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRAC+LEFSGSWDSHLHLMEFAYNNSYQA
Sbjct: 187 LALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA 246

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 247 TIGMAPFEALYGKCCRSPVCWGEVGE 272

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL
Match: A0A5A7SNM6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2549G00010 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 2.27e-144
Identity = 194/206 (94.17%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKR+VA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 14  MKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 73

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKST+TASKWGQLYMTEIV+LHG+PVSI+SDRDARFTSKFWK LQ
Sbjct: 74  WVVVDRLTKSAHFVPGKSTHTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQ 133

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLRAC+LEFSGSWDSHLHLMEFAYNNSYQA
Sbjct: 134 LALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA 193

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 194 TIGMAPFEALYGKCCRSPVCWGEVGE 219

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL
Match: A0A5A7SMN8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001520 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 7.31e-144
Identity = 194/206 (94.17%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKREVA FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP+TLKGYTVI
Sbjct: 21  MKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI 80

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SDRDARFTSKFWK LQ
Sbjct: 81  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQ 140

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDFSTAFHPQTDGQTERLNQ+LEDMLR C+LEF GSWDSHLHLMEFAYNNSYQA
Sbjct: 141 LALGTRLDFSTAFHPQTDGQTERLNQILEDMLRVCVLEFPGSWDSHLHLMEFAYNNSYQA 200

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 201 TIGMAPFEALYGKCCRSPVCWGEVGE 226

[Close]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL
Match: A0A5D3DWH2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00810 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 1.88e-143
Identity = 194/206 (94.17%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MKREVAGFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVI 60
           MKREVA FVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLP+TLKGY VI
Sbjct: 49  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYKVI 108

Query: 61  WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVKLHGIPVSIVSDRDARFTSKFWKELQ 120
           WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV+LHG+PVSI+SD+DARFTSKFWK LQ
Sbjct: 109 WVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDKDARFTSKFWKGLQ 168

Query: 121 LALGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACMLEFSGSWDSHLHLMEFAYNNSYQA 180
           LALGTRLDF+TAFHPQTDGQTERLNQVLEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQA
Sbjct: 169 LALGTRLDFNTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHLHLMEFSYNNSYQA 228

Query: 181 TIDMAPFEALYGKCCRSPVCWGEVGE 206
           TI MAPFEALYGKCCRSPVCWGEVGE
Sbjct: 229 TIGMAPFEALYGKCCRSPVCWGEVGE 254

The following BLAST results are available for this feature:

BLAST of MELO.jh101804.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18679.1	9.40e-146	94.17	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063083.1	1.16e-145	94.66	pol protein [Cucumis melo var. makuwa]	[more]
KAA0031853.1	4.69e-144	94.17	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032302.1	1.51e-143	94.17	pol protein [Cucumis melo var. makuwa]	[more]
TYK28167.1	3.87e-143	94.17	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101804.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	2.3e-36	39.39	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	3.9e-36	39.39	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	1.6e-34	36.65	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.6e-34	36.65	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.6e-34	36.65	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D562	4.55e-146	94.17	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00170 PE...	[more]
A0A5A7V4U5	5.61e-146	94.66	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14343G00020 ...	[more]
A0A5A7SNM6	2.27e-144	94.17	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2549G00010 P...	[more]
A0A5A7SMN8	7.31e-144	94.17	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001520 P...	[more]
A0A5D3DWH2	1.88e-143	94.17	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00810 PE...	[more]

BLAST of MELO.jh101804.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 29..203 e-value: 5.4E-46 score: 158.4
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 5..188
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 31..194 score: 18.918982
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 32..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101804.1.t1	MELO.jh101804.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding