MELO.jh101116.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101116.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr02: 683318 .. 687355 (+)
RNA-Seq Expression	MELO.jh101116.1
Synteny	MELO.jh101116.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACAAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTAGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCCTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCACTCTACACTTGTTAGTCTCAATCAGGAAATGGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATTTGGACTCAGTTGGATCAGGCAAAAATTAGCCCTGATCATATTCGTCTCATCAAAGTATTAATGGGTCTCCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTATTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCCCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTCTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACTATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAATTTTCCCATAAAGCCGGTTCTTCATCTGTTGTTGCTGCTGCTACATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCTACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCTTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAGTCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAACCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGTCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCCTCTACCCCTCTATTTCCCACTCCTGATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAAGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

mRNA sequence

ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACAAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTAGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCCTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCACTCTACACTTGTTAGTCTCAATCAGGAAATGGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATTTGGACTCAGTTGGATCAGGCAAAAATTAGCCCTGATCATATTCGTCTCATCAAAGTATTAATGGGTCTCCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTATTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCCCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTCTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACTATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAATTTTCCCATAAAGCCGGTTCTTCATCTGTTGTTGCTGCTGCTACATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCTACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCTTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAGTCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAACCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGTCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCCTCTACCCCTCTATTTCCCACTCCTGATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAAGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Coding sequence (CDS)

ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACAAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTAGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCCTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCACTCTACACTTGTTAGTCTCAATCAGGAAATGGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATTTGGACTCAGTTGGATCAGGCAAAAATTAGCCCTGATCATATTCGTCTCATCAAAGTATTAATGGGTCTCCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTATTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCCCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTCTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACTATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAATTTTCCCATAAAGCCGGTTCTTCATCTGTTGTTGCTGCTGCTACATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCTACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCTTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAGTCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAACCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGTCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCCTCTACCCCTCTATTTCCCACTCCTGATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAAGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Protein sequence

MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS

Homology

[Close]

BLAST of MELO.jh101116.1 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2724 bits (7062), Expect = 0.0
Identity = 1344/1346 (99.85%), Postives = 1345/1346 (99.93%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of MELO.jh101116.1 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2722 bits (7057), Expect = 0.0
Identity = 1343/1346 (99.78%), Postives = 1344/1346 (99.85%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEPVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of MELO.jh101116.1 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2642 bits (6849), Expect = 0.0
Identity = 1312/1346 (97.47%), Postives = 1313/1346 (97.55%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLG                                LAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLG--------------------------------LAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1314

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1314

[Close]

BLAST of MELO.jh101116.1 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2492 bits (6460), Expect = 0.0
Identity = 1247/1346 (92.64%), Postives = 1254/1346 (93.16%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAE+IQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAENIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIE+LEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK+LWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEFVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RN LPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIEC+YCHKRGHILDNCPTRPPRPPGHSHKPKF HKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSH PVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHTPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN          
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN---------- 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
                                                     DNAMEYKDSRFLSFLAQQG
Sbjct: 541  -----------------------------------------DNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSV                                
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSV-------------------------------- 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQAL KTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALDKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFIGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDM A
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMRA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSP ILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPIILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1263

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKV STLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVFSTLPS 1263

[Close]

BLAST of MELO.jh101116.1 vs. NCBI nr
Match: KAA0036615.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2179 bits (5646), Expect = 0.0
Identity = 1112/1302 (85.41%), Postives = 1127/1302 (86.56%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILD TNYITWAHQMRSFLIGRKLWRIVTGDIT+PVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDDTNYITWAHQMRSFLIGRKLWRIVTGDITEPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVN+YLATLQPIWTQLDQAKISPDHIRLIKVL+GLRP+YESVRAALLH
Sbjct: 121  STLVSLNQEVGQSVNKYLATLQPIWTQLDQAKISPDHIRLIKVLVGLRPKYESVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA++EILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVEEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATS-DITEPSSLQL 300
            PTIE RYCHKRGHILDNCPTRP RPPGHSHKPKFSHKAGSSSVVAAATS DITEPSS   
Sbjct: 241  PTIEYRYCHKRGHILDNCPTRPSRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSS--- 300

Query: 301  TDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADG 360
                                   TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSAD 
Sbjct: 301  -----------------------TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADC 360

Query: 361  NSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQ 420
            NSMSISHIGTV                                          QDSQTGQ
Sbjct: 361  NSMSISHIGTV------------------------------------------QDSQTGQ 420

Query: 421  VIGTGRKVGRLFELTSLHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            VIGT RK                             WHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  VIGTRRK-----------------------------WHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLC+KPFGLIHSDIWGPAPCPTVN          
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCNKPFGLIHSDIWGPAPCPTVN---------- 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
                                                     DNAMEYKDSRFLSFLAQQG
Sbjct: 541  -----------------------------------------DNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDS+RAQLL GSC EKFWGEA LTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSIRAQLLFGSCSEKFWGEAVLTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPP+YSHLKVFGCA FVLLH HEHTKLEPRA LCCFLGYGT+HKGFRC
Sbjct: 661  IHNISPFERLYGTPPSYSHLKVFGCAYFVLLHPHEHTKLEPRACLCCFLGYGTKHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSP+SFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPNSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALP+LPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIM LVEPS
Sbjct: 781  PLTSELTESHTTSALPDLPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMPLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPL QQAMD+ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTH DGSIERYK
Sbjct: 841  SYKEASTNPLRQQAMDDELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHFDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            A L+AKGYSQEYGIDYEETFAPVARMTSVRSLLAI AAKQWPLLQMDVKNAFLNG LSEE
Sbjct: 901  ACLIAKGYSQEYGIDYEETFAPVARMTSVRSLLAITAAKQWPLLQMDVKNAFLNGILSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPP  TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPLDTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIIT DD QAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITSDDRQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKY SDLLNRSGITDSATFS PLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYTSDLLNRSGITDSATFSIPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1154

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTT YCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTSYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1154

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHL 1301
            PQTSPTILHCDNHSAIQ AHNDVFHERTKHIENDCHFV HHL
Sbjct: 1261 PQTSPTILHCDNHSAIQSAHNDVFHERTKHIENDCHFVCHHL 1154

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 2.0e-205
Identity = 489/1467 (33.33%), Postives = 724/1467 (49.35%), Query Frame = 0


Query: 12   TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSK 71
            T L  TNY+ W+ Q+ +   G +L   + G  T P   I  + +        R +  D  
Sbjct: 24   TKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKL 83

Query: 72   NHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMG 131
             +  +  LG  S+ ++        +A ++W+ L   + +    H  QL + L    +   
Sbjct: 84   IYSAV--LGAISM-SVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGT- 143

Query: 132  QSVNEYLATLQPIWTQLDQAKISPDHIRLI-KVLMGLRPEYESVRAALLHRNPLPSLDAA 191
            +++++Y+  L   + QL       DH   + +VL  L  EY+ V   +  ++  P+L   
Sbjct: 144  KTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEI 203

Query: 192  IQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHK 251
             + +L  E ++  VSS  + + +    +   N T    N         N      RY   
Sbjct: 204  HERLLNHESKILAVSSA-TVIPITANAVSHRNTTTTNNN---------NNGNRNNRY-DN 263

Query: 252  RGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLHDLLKQVI 311
            R +  ++ P +      H +  +     G   +           S LQ    H L    +
Sbjct: 264  RNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQ----HFL--SSV 323

Query: 312  SSQSTALAVTP--------------GTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHS 371
            +SQ      TP                +WLLDS   +H+TSD + LS H P      +  
Sbjct: 324  NSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 383

Query: 372  ADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQ 431
            ADG+++ ISH G+ +  T    + L N  +VPN+  NL SV +LC+  G+++ F     Q
Sbjct: 384  ADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQ 443

Query: 432  VQDSQTGQVIGTGRKVGRLFELTSLHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSL 491
            V+D  TG  +  G+    L+E     S      ++P +  T   WH RLGH + + L S+
Sbjct: 444  VKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSV 503

Query: 492  TSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNG 551
             S   L+ ++  + F  C  C + K   + F +S     +P   I+SD+W  +P  + + 
Sbjct: 504  ISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDN 563

Query: 552  YRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSR 611
            YRY+V+F+D ++R+TW+Y L+ +S + + ++ F N+++ +F ++I    +DN  E+    
Sbjct: 564  YRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF--VA 623

Query: 612  FLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVY 671
               + +Q G     S PHT + NG +ERKHRHI+++    L   S P+ +W  A   +VY
Sbjct: 624  LWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVY 683

Query: 672  VINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGY 731
            +INRLP+ ++   SPF++L+GT P Y  L+VFGCAC+  L  +   KL+ ++R C FLGY
Sbjct: 684  LINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGY 743

Query: 732  GTEHKGFRCWDPISQRLRISRHVTFWEH------------------RMFSSLSSFHASL- 791
                  + C    + RL ISRHV F E+                  R  S + S H +L 
Sbjct: 744  SLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLP 803

Query: 792  -----------SSPHSFFTDPSTPLF---------------------------------- 851
                       S PH   T PS+P                                    
Sbjct: 804  TRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGP 863

Query: 852  -----------------------PTPDSPS---NTTSCPPLTSELTESHTTSA-----LP 911
                                   PT +SPS    + S P  +S  + S TTSA      P
Sbjct: 864  QPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSP 923

Query: 912  ELPSVPCEEP----------EHAPVR-RSTRVRETPSHLKEYHCFSTIMSLV---EPSSY 971
              PS+    P            AP+   S   R     +K    +S  +SL    EP + 
Sbjct: 924  TPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTA 983

Query: 972  KEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKTHSDGSIERYKA 1031
             +A  +  W+ AM +E+ A    HTWD V  PP    I GC+WIF  K +SDGS+ RYKA
Sbjct: 984  IQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKA 1043

Query: 1032 RLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEV 1091
            RLVAKGY+Q  G+DY ETF+PV + TS+R +L +A  + WP+ Q+DV NAFL GTL+++V
Sbjct: 1044 RLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDV 1103

Query: 1092 YMKPPPG--TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ 1151
            YM  PPG      P  VC LR+ALYGLKQAPRAW+    + +  +GF +S  D++LF  Q
Sbjct: 1104 YMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQ 1163

Query: 1152 TPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY 1211
                IV +L+YVDD++ITG+DP  + +    L + F +KD   L+YFLG+E     +G +
Sbjct: 1164 RGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLH 1223

Query: 1212 LSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR 1271
            LSQ +Y  DLL R+ +  +   +TP+ P+ +L+ + G  L DPT YR +VGSL YL  TR
Sbjct: 1224 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTR 1283

Query: 1272 PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG 1331
            PDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  +SDADWAG
Sbjct: 1284 PDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAG 1343

Query: 1332 DPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG 1346
            D  D  ST GY  YLG   ISW SKKQ  V RSSTE+EYR++A+ +SE+ W+  LLT++G
Sbjct: 1344 DKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELG 1403

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.2e-196
Identity = 473/1478 (32.00%), Postives = 711/1478 (48.11%), Query Frame = 0


Query: 12   TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLED---- 71
            T L  TNY+ W+ Q+ +   G +L   + G  + P+ P    T A     + R+      
Sbjct: 24   TKLTSTNYLMWSRQVHALFDGYELAGFLDG--STPMPPATIGTDA-----VPRVNPDYTR 83

Query: 72   WDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLN 131
            W  ++  I + +      ++        +A ++W+ L   + +    H  QL        
Sbjct: 84   WRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR------- 143

Query: 132  QEMGQSVNEYLATLQPIWTQLDQAKI---SPDHIRLI-KVLMGLRPEYESVRAALLHRNP 191
                              T+ DQ  +     DH   + +VL  L  +Y+ V   +  ++ 
Sbjct: 144  ----------------FITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDT 203

Query: 192  LPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTI 251
             PSL    + ++  E +L  ++S  ++V   T ++     T   +N    G         
Sbjct: 204  PPSLTEIHERLINRESKLLALNS--AEVVPITANVVTHRNTNTNRNQNNRG--------- 263

Query: 252  ECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLH 311
                   R +  +N  +   +P   S   +  ++     +       +   S+ +   LH
Sbjct: 264  -----DNRNYNNNNNRSNSWQP--SSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLH 323

Query: 312  DLLKQVISSQSTA----------LAVTP---GTSWLLDSACCNHMTSDISLLSSHIPVQS 371
                     QST+          LAV       +WLLDS   +H+TSD + LS H P   
Sbjct: 324  QFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTG 383

Query: 372  LPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIF 431
               +  ADG+++ I+H G+ + PT    + L+   +VPN+  NL SV +LC+   +++ F
Sbjct: 384  GDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEF 443

Query: 432  SSHGCQVQDSQTGQVIGTGRKVGRLFELTSLHSPVFPAISAPVTDNTLFQWHLRLGHASS 491
                 QV+D  TG  +  G+    L+E     S      ++P +  T   WH RLGH S 
Sbjct: 444  FPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSL 503

Query: 492  NKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAP 551
              L S+ S   L  ++       C  C + K   + F  S     KP   I+SD+W  +P
Sbjct: 504  AILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SP 563

Query: 552  CPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAM 611
              +++ YRY+V+F+D ++R+TW+Y L+ +S +   ++ F ++++ +F ++I  L +DN  
Sbjct: 564  ILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGG 623

Query: 612  EYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEA 671
            E+   R   +L+Q G     S PHT + NG +ERKHRHI++     L   S P+ +W  A
Sbjct: 624  EFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYA 683

Query: 672  ALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARL 731
               +VY+INRLP+ ++   SPF++L+G PP Y  LKVFGCAC+  L  +   KLE +++ 
Sbjct: 684  FSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQ 743

Query: 732  CCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPH--------- 791
            C F+GY      + C    + RL  SRHV F E     S ++F  S S            
Sbjct: 744  CAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWP 803

Query: 792  SFFTDPSTPLF--------------PTPDS---------------PSNTTSCPPLTSELT 851
            S  T P+TPL               P P S               PS++ S P  +    
Sbjct: 804  SHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTA 863

Query: 852  ESHT------------------------------------TSALPE---------LPSVP 911
             SH                                      S LP+          PS  
Sbjct: 864  PSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTS 923

Query: 912  CEEPEHAPVRRSTRVRETPSHL-------------------------------KEYHCFS 971
              EP ++P   ST     P  L                               ++Y   +
Sbjct: 924  ISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYAT 983

Query: 972  TIMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKT 1031
            ++ +  EP +  +A  +  W+QAM +E+ A    HTWD V  PP    I GC+WIF  K 
Sbjct: 984  SLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKF 1043

Query: 1032 HSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKN 1091
            +SDGS+ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L +A  + WP+ Q+DV N
Sbjct: 1044 NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNN 1103

Query: 1092 AFLNGTLSEEVYMKPPPGTTPP--PQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 1151
            AFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  +GF +
Sbjct: 1104 AFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVN 1163

Query: 1152 SSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLG 1211
            S  D++LF  Q    I+ +L+YVDD++ITG+D   +      L + F +K+  +L+YFLG
Sbjct: 1164 SISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLG 1223

Query: 1212 LEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQL 1271
            +E      G +LSQ +Y  DLL R+ +  +   +TP+  + +LT   G  L DPT YR +
Sbjct: 1224 IEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGI 1283

Query: 1272 VGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLV 1331
            VGSL YL  TRPD++YAV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L 
Sbjct: 1284 VGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLS 1343

Query: 1332 LSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSEL 1346
            L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSSTE+EYR++A+ +SEL
Sbjct: 1344 LHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEL 1403

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 7.4e-168
Identity = 419/1352 (30.99%), Postives = 667/1352 (49.33%), Query Frame = 0


Query: 19   YITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQIITW 78
            + TW  +MR  LI + L +++  D  KP      +T         + EDW   + +  + 
Sbjct: 17   FSTWQRRMRDLLIQQGLHKVLDVDSKKP------DTM--------KAEDWADLDERAASA 76

Query: 79   LG-NTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQSVNEY 138
            +  + S   ++   D  D+A+ +W  L + + S  L +   L   L +L+   G +   +
Sbjct: 77   IRLHLSDDVVNNIIDE-DTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 136

Query: 139  LATLQPIWTQLDQAKIS-PDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILF 198
            L     + TQL    +   +  + I +L  L   Y+++   +LH      L      +L 
Sbjct: 137  LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLL 196

Query: 199  EEKRLGIVSSLHSDVALAT----THLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRG 258
             EK        +   AL T       ++++        +      +      C  C++ G
Sbjct: 197  NEKMR--KKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 256

Query: 259  HILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLHDLLKQVISS 318
            H   +CP  P +  G +   K                   + ++  +   +D +   I+ 
Sbjct: 257  HFKRDCP-NPRKGKGETSGQK------------------NDDNTAAMVQNNDNVVLFINE 316

Query: 319  QSTALAVT-PGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVN 378
            +   + ++ P + W++D+A  +H T    L   ++       +   + +   I+ IG + 
Sbjct: 317  EEECMHLSGPESEWVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTSYSKIAGIGDIC 376

Query: 379  TP-----TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRK 438
                   T+ L +  HVP+L  NL S   L   G    F++   ++  ++   VI  G  
Sbjct: 377  IKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVA 436

Query: 439  VGRLFELTSLHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTF 498
             G L+   +        ++A   + ++  WH R+GH S   L+ L    L++        
Sbjct: 437  RGTLYRTNA--EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVK 496

Query: 499  DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTW 558
             C +C   KQ  +SF  S+        L++SD+ GP    ++ G +YFV FIDD SR  W
Sbjct: 497  PCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLW 556

Query: 559  IYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSC 618
            +Y L+ +  ++Q++  F  +++ +   K+K LR+DN  EY    F  + +  G   +++ 
Sbjct: 557  VYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTV 616

Query: 619  PHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPF 678
            P T Q NG AER +R I++ VR+ L     P+ FWGEA  T+ Y+INR PS  +    P 
Sbjct: 617  PGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPE 676

Query: 679  ERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQR 738
                    +YSHLKVFGC  F  +   + TKL+ ++  C F+GYG E  G+R WDP+ ++
Sbjct: 677  RVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKK 736

Query: 739  LRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPT-PDSPSNTTSCPPLTSEL 798
            +  SR V F E  + ++     A +S       +   P F T P + +N TS    T E+
Sbjct: 737  VIRSRDVVFRESEVRTA-----ADMSEK---VKNGIIPNFVTIPSTSNNPTSAESTTDEV 796

Query: 799  TE------------SHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIM 858
            +E                  + E+      E +H P+RRS R R           +  I 
Sbjct: 797  SEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTE-YVLIS 856

Query: 859  SLVEPSSYKEASTNPLWQQ---AMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTH 918
               EP S KE  ++P   Q   AM  E+++L K  T+  V+LP GK+P+ CKW+FK+K  
Sbjct: 857  DDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKD 916

Query: 919  SDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNA 978
             D  + RYKARLV KG+ Q+ GID++E F+PV +MTS+R++L++AA+    + Q+DVK A
Sbjct: 917  GDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTA 976

Query: 979  FLNGTLSEEVYMKPPPGTTPPPQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS 1038
            FL+G L EE+YM+ P G     +K  VC L ++LYGLKQAPR W+  F S +    +  +
Sbjct: 977  FLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKT 1036

Query: 1039 SHDSAL-FTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLG 1098
              D  + F R + N  ++LLLYVDDM+I G D   I+ L+  L K F+MKDLG     LG
Sbjct: 1037 YSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILG 1096

Query: 1099 LEI--SSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRL------TPFDGVPLE 1158
            ++I    +S   +LSQ KY   +L R  + ++   STPL  +++L      T  +     
Sbjct: 1097 MKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNM 1156

Query: 1159 DPTLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL 1218
                Y   VGSL+Y  V TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L
Sbjct: 1157 AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL 1216

Query: 1219 QFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYR 1278
             F   S  +L G++DAD AGD  +R+S+TGY F      ISW+SK Q  V+ S+TE+EY 
Sbjct: 1217 CFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1276

Query: 1279 ALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVR 1331
            A  +   E+IWL+  L ++G  Q    +++CD+ SAI ++ N ++H RTKHI+   H++R
Sbjct: 1277 AATETGKEMIWLKRFLQELGLHQ-KEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIR 1316

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 495.0 bits (1273), Expect = 2.7e-138
Identity = 396/1451 (27.29%), Postives = 657/1451 (45.28%), Query Frame = 0


Query: 15   DGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQ 74
            DG  Y  W  ++R+ L  + + ++V G +   V         +  +  ER          
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVD--------DSWKKAER-----CAKST 71

Query: 75   IITWLGNTSIPAIHTQFDAFD-SAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQS 134
            II +L ++ +      F   D +A+++ + L   ++   LA    L   L+SL      S
Sbjct: 72   IIEYLSDSFL-----NFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 131

Query: 135  VNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPE-YESVRAALLHRNPLPSLDAAIQ 194
            +  +      + ++L  A    + +  I  L+   P  Y+ +  A+   +      A ++
Sbjct: 132  LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 191

Query: 195  EILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPT---------- 254
              L +++    + + H+D     T  +  N  +   N     + F N  T          
Sbjct: 192  NRLLDQEIK--IKNDHND-----TSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNS 251

Query: 255  ---IECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQL 314
               ++C +C + GHI  +C         H  +   +    +   V  ATS          
Sbjct: 252  KYKVKCHHCGREGHIKKDC--------FHYKRILNNKNKENEKQVQTATS---------- 311

Query: 315  TDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSA-- 374
               H +   V    +T  +V     ++LDS   +H+ +D SL +  + V  +PP+  A  
Sbjct: 312  ---HGIAFMVKEVNNT--SVMDNCGFVLDSGASDHLINDESLYTDSVEV--VPPLKIAVA 371

Query: 375  -DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQ 434
              G  +  +  G V   N   I L +         NL SV +L + G++I F   G  + 
Sbjct: 372  KQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTIS 431

Query: 435  DSQTGQVIGTGRKVGRLFELTSLHSPVFPAISAPVTDNTLFQ-WHLRLGHASSNKLRSLT 494
             +    V  +G        L ++    F A S        F+ WH R GH S  KL  + 
Sbjct: 432  KNGLMVVKNSGM-------LNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIK 491

Query: 495  STGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIWGPAPC 554
               + ++ S  N  +     C  C   KQ  L F   K  +   +P  ++HSD+ GP   
Sbjct: 492  RKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITP 551

Query: 555  PTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAME 614
             T++   YFV+F+D ++ +   Y ++ +S ++ ++ DF    +  F+ K+  L  DN  E
Sbjct: 552  VTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGRE 611

Query: 615  YKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAA 674
            Y  +    F  ++G     + PHT Q NG +ER  R I +  R  +      + FWGEA 
Sbjct: 612  YLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAV 671

Query: 675  LTSVYVINRLPSQVIHNIS--PFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRAR 734
            LT+ Y+INR+PS+ + + S  P+E  +   P   HL+VFG   +V +  ++  K + ++ 
Sbjct: 672  LTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFDDKSF 731

Query: 735  LCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSS-------------------- 794
               F+GY  E  GF+ WD ++++  ++R V   E  M +S                    
Sbjct: 732  KSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKN 791

Query: 795  ----------------------LSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPPL 854
                                  +     S  S +  F + S  +  T + P+ +  C  +
Sbjct: 792  FPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQT-EFPNESKECDNI 851

Query: 855  ----------------------------------TSELTESHTTSALPELPSVPCEEPEH 914
                                               +E  ES T   L E+      + + 
Sbjct: 852  QFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDG 911

Query: 915  APV--RRSTRVRETPS-------------HLKEYHCFSTIMSLVEPSSYKEASTNPLWQQ 974
              +  RRS R++  P               L  +  F+ + +  +   Y++  ++  W++
Sbjct: 912  IEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSS--WEE 971

Query: 975  AMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYG 1034
            A++ EL A    +TW     P  K  +  +W+F +K +  G+  RYKARLVA+G++Q+Y 
Sbjct: 972  AINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQ 1031

Query: 1035 IDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPP 1094
            IDYEETFAPVAR++S R +L++       + QMDVK AFLNGTL EE+YM+ P G +   
Sbjct: 1032 IDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNS 1091

Query: 1095 QKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALF--TRQTPNGIVLLLLYV 1154
              VC L +A+YGLKQA R WF  F   + +  F +SS D  ++   +   N  + +LLYV
Sbjct: 1092 DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYV 1151

Query: 1155 DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLN 1214
            DD++I   D   +++ + YL + F M DL  + +F+G+ I       YLSQ+ Y   +L+
Sbjct: 1152 DDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILS 1211

Query: 1215 RSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTV-TRPDIAYAVHIVS 1274
            +  + +    STPL   +     +    +  T  R L+G L+Y+ + TRPD+  AV+I+S
Sbjct: 1212 KFNMENCNAVSTPLPSKINYELLNS-DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1271

Query: 1275 QFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRSTT 1334
            ++ +   +  +  + R+LRY+KGT+   L F    +    + G+ D+DWAG   DR+STT
Sbjct: 1272 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1331

Query: 1335 GYCFYLGD-ALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTI 1338
            GY F + D  LI W +K+Q+ V+ SSTE+EY AL +A  E +WL++LLT +     +P  
Sbjct: 1332 GYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIK 1391

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-52
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 0


Query: 1026 LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYA 1085
            LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1086 SDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAV 1145
              +LN +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63   EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1146 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRS 1205
            +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRS
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1206 TTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIW 1250
            TTG+C +LG  +ISW +K+Q  VSRSSTE+EYRALA   +EL W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 2724 bits (7062), Expect = 0.0
Identity = 1344/1346 (99.85%), Postives = 1345/1346 (99.93%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 2722 bits (7057), Expect = 0.0
Identity = 1343/1346 (99.78%), Postives = 1344/1346 (99.85%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEPVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 2642 bits (6849), Expect = 0.0
Identity = 1312/1346 (97.47%), Postives = 1313/1346 (97.55%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLG                                LAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLG--------------------------------LAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1314

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1314

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 2492 bits (6460), Expect = 0.0
Identity = 1247/1346 (92.64%), Postives = 1254/1346 (93.16%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAE+IQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAENIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIE+LEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK+LWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEFVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RN LPSLDAA+QEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIEC+YCHKRGHILDNCPTRPPRPPGHSHKPKF HKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSH PVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHTPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSL-HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSL HSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN          
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN---------- 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
                                                     DNAMEYKDSRFLSFLAQQG
Sbjct: 541  -----------------------------------------DNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSV                                
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSV-------------------------------- 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMDNELQAL KTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALDKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFIGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDM A
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMRA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSP ILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPIILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1263

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1345
            IFTKALHSPRFTQLIHKLKV STLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVFSTLPS 1263

[Close]

BLAST of MELO.jh101116.1 vs. ExPASy TrEMBL
Match: A0A5A7T587 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001390 PE=4 SV=1)

HSP 1 Score: 2179 bits (5646), Expect = 0.0
Identity = 1112/1302 (85.41%), Postives = 1127/1302 (86.56%), Query Frame = 0


Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILD TNYITWAHQMRSFLIGRKLWRIVTGDIT+PVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDDTNYITWAHQMRSFLIGRKLWRIVTGDITEPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVN+YLATLQPIWTQLDQAKISPDHIRLIKVL+GLRP+YESVRAALLH
Sbjct: 121  STLVSLNQEVGQSVNKYLATLQPIWTQLDQAKISPDHIRLIKVLVGLRPKYESVRAALLH 180

Query: 181  RNPLPSLDAAIQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAA++EILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVEEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATS-DITEPSSLQL 300
            PTIE RYCHKRGHILDNCPTRP RPPGHSHKPKFSHKAGSSSVVAAATS DITEPSS   
Sbjct: 241  PTIEYRYCHKRGHILDNCPTRPSRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSS--- 300

Query: 301  TDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADG 360
                                   TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSAD 
Sbjct: 301  -----------------------TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADC 360

Query: 361  NSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQ 420
            NSMSISHIGTV                                          QDSQTGQ
Sbjct: 361  NSMSISHIGTV------------------------------------------QDSQTGQ 420

Query: 421  VIGTGRKVGRLFELTSLHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            VIGT RK                             WHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  VIGTRRK-----------------------------WHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLC+KPFGLIHSDIWGPAPCPTVN          
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCNKPFGLIHSDIWGPAPCPTVN---------- 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
                                                     DNAMEYKDSRFLSFLAQQG
Sbjct: 541  -----------------------------------------DNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDS+RAQLL GSC EKFWGEA LTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSIRAQLLFGSCSEKFWGEAVLTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPP+YSHLKVFGCA FVLLH HEHTKLEPRA LCCFLGYGT+HKGFRC
Sbjct: 661  IHNISPFERLYGTPPSYSHLKVFGCAYFVLLHPHEHTKLEPRACLCCFLGYGTKHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSP+SFFTDPSTPLFPTPDSPSNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPNSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALP+LPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIM LVEPS
Sbjct: 781  PLTSELTESHTTSALPDLPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMPLVEPS 840

Query: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPL QQAMD+ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTH DGSIERYK
Sbjct: 841  SYKEASTNPLRQQAMDDELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHFDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            A L+AKGYSQEYGIDYEETFAPVARMTSVRSLLAI AAKQWPLLQMDVKNAFLNG LSEE
Sbjct: 901  ACLIAKGYSQEYGIDYEETFAPVARMTSVRSLLAITAAKQWPLLQMDVKNAFLNGILSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPP  TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPLDTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIIT DD QAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITSDDRQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKY SDLLNRSGITDSATFS PLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYTSDLLNRSGITDSATFSIPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1154

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTT YCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTSYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1154

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHL 1301
            PQTSPTILHCDNHSAIQ AHNDVFHERTKHIENDCHFV HHL
Sbjct: 1261 PQTSPTILHCDNHSAIQSAHNDVFHERTKHIENDCHFVCHHL 1154

[Close]

BLAST of MELO.jh101116.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 484.6 bits (1246), Expect = 2.6e-136
Identity = 257/552 (46.56%), Postives = 351/552 (63.59%), Query Frame = 0


Query: 781  LTSELTESHTTSALPELPSVPCEEPEHAP-VRRSTRVRETPSHLKEYHCFST-------- 840
            + S+   S ++S++  +PS   +     P V  S R    P++L++Y+C S         
Sbjct: 1    MVSDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDI 60

Query: 841  -------------------IMSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDL 900
                               I    EPS+Y EA    +W  AMD+E+ A+  THTW+   L
Sbjct: 61   SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 120

Query: 901  PPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL 960
            PP KKPIGCKW++KIK +SDG+IERYKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +L
Sbjct: 121  PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 180

Query: 961  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPPQKVCLLRRALYGLK 1020
            AI+A   + L Q+D+ NAFLNG L EE+YMK PP      G + PP  VC L++++YGLK
Sbjct: 181  AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 240

Query: 1021 QAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDL 1080
            QA R WF  FS T+   GF  S  D   F + T    + +L+YVDD+II  ++  A+ +L
Sbjct: 241  QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300

Query: 1081 QCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDP 1140
            +  L   F+++DLG L YFLGLEI+ S++G  + Q KYA DLL+ +G+      S P+DP
Sbjct: 301  KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360

Query: 1141 NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRI 1200
            +V  +   G    D   YR+L+G L+YL +TR DI++AV+ +SQF  APR  H  AV++I
Sbjct: 361  SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420

Query: 1201 LRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQS 1260
            L YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +LG +LISW+SKKQ 
Sbjct: 421  LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480

Query: 1261 VVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHER 1299
            VVS+SS E+EYRAL+ AT E++WL     ++  P + PT+L CDN +AI IA N VFHER
Sbjct: 481  VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540

[Close]

BLAST of MELO.jh101116.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.6e-53
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 0


Query: 1026 LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYA 1085
            LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1086 SDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAV 1145
              +LN +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63   EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1146 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRS 1205
            +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRS
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1206 TTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIW 1250
            TTG+C +LG  +ISW +K+Q  VSRSSTE+EYRALA   +EL W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of MELO.jh101116.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 104.8 bits (260), Expect = 5.7e-22
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 837 EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIE 896
           EP S   A  +P W QAM  EL AL++  TW  V  P  +  +GCKW+FK K HSDG+++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 897 RYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA 936
           R KARLVAKG+ QE GI + ET++PV R  ++R++L +A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of MELO.jh101116.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.5e-18
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 1132 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGF 1191
            +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  F
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1192 SDADWAGDPTDRRSTTGYC 1211
            +D+DWA  P  RRS TG+C
Sbjct: 61   ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of MELO.jh101116.1 vs. NCBI nr


Match Name	Identity	Description
KAA0043149.1	99.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036574.1	99.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0065380.1	97.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0058316.1	92.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036615.1	85.41	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of MELO.jh101116.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.0e-205	33.33	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.2e-196	32.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	7.4e-168	30.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.7e-138	27.29	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	5.1e-52	49.11	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO.jh101116.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5D3DG18	99.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SZ66	99.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VDW0	97.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UVX4	92.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T587	85.41	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of MELO.jh101116.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.6e-136	46.56	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.6e-53	49.11	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	5.7e-22	49.49	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	8.5e-18	51.90	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 226..242 e-value: 1.2 score: 10.8 coord: 244..260 e-value: 0.032 score: 20.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 506..682 e-value: 6.4E-37 score: 128.8
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 865..1104 e-value: 3.3E-75 score: 252.8
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 442..496 e-value: 2.7E-9 score: 36.7
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 68..200 e-value: 4.6E-11 score: 42.6
None	No IPR available	GENE3D	4.10.60.10		coord: 212..264 e-value: 3.3E-6 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 762..795
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 762..816
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 354..1224
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1190..1328 e-value: 2.19465E-78 score: 252.389
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 510..609 e-value: 7.0E-13 score: 48.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 507..673 score: 20.299007
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 14..39 e-value: 1.1E-7 score: 31.4
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 509..682
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 217..262
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 864..1295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101116.1.t1	MELO.jh101116.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding