MELO.jh101030.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101030.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Ty3/gypsy retrotransposon protein
Location	chr01: 20221253 .. 20222220 (-)
RNA-Seq Expression	MELO.jh101030.1
Synteny	MELO.jh101030.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTGGAGATCCCTGACGCGATATGGAGTGATATCTCCATGGATTTCATCGAAGGACTACCCAAGTCCAAAGGATGGGATGTGATACTAGTGGTAGTTGACCGGCTAAGTAAGTATGCACACTTTCTACTACTAAAACACCCCTATACAGCCAAAGTCGTGGCCGAAACGTTTGTTAAGGAAGTGGTAAAGCTCCTCGGATGCCCCAGATCGATAGTTTCTGATAGGGACAAGGTTTTCCTTAGCCATTTCTGGAAAGAAATGTTCCGTTTAGCCGGAACCAAGCTGAATCGAAGCTCATCTTACCATCCTCAATTGGATAGGCAGACCGAGGTAGTGAAGAAGAGTGCAAAAACCTACTTGAGATGCTTCTGTGGGGAGAAGCCGAATGAGTGGAGCCAATGGATACACTGTGCAGAATACTGGTACAATACCACCTATCATAGCTCCATAGGAATTACCCCCTTCCAAGCAGTATATGGTAGACTTCCCCGCCATTGATATACTACGGAGACATGAAGACACCAAACTCCACACTTGATCAACAGCTGAAAGAGAGGGATGTGGTACTGGGGGCGCTGAAAGAACATTTGAAATTGGCTCAAGAAAGAATGAAGAAATAAGTGGACTTGAAGAGAAGGGAGGTAGAATTTCAAGAAGGGGACTTTGTATTTCTAAAAATACGTCTATACCGGCAGGTGACTCTCAGGAAGAGAAGGAATGAGAAGTTGTCACCGAAATATTTCAGGCTATATTAGATAGTAGAAAGGATCGGAGAAGTGGCGTATAGGCTAGAGCTTCCCAGTTCAGCAGCTATCCACCCTGTTTTTCATGTATCGCAACTGAAGAAGGCCATGGGGAATGGAGAATCGGTTCAGCCATTGGACCCTTATGTGAATGAGAATCACGAGTGGATCACACAACCTGAAGAAGTATACAGTTATCGCAAGAGTGGGAAGCATTGA

mRNA sequence

ATGCCTTTGGAGATCCCTGACGCGATATGGAGTGATATCTCCATGGATTTCATCGAAGGACTACCCAAGTCCAAAGGATGGGATGTGATACTAGTGGTAGTTGACCGGCTAAGTAAGTATGCACACTTTCTACTACTAAAACACCCCTATACAGCCAAAGTCGTGGCCGAAACGTTTGTTAAGGAAGTGGTAAAGCTCCTCGGATGCCCCAGATCGATAGTTTCTGATAGGGACAAGGTTTTCCTTAGCCATTTCTGGAAAGAAATGTTCCGTTTAGCCGGAACCAAGCTGAATCGAAGCTCATCTTACCATCCTCAATTGGATAGGCAGACCGAGGTAGTGAAGAAGAGTGCAAAAACCTACTTGAGATGCTTCTGTGGGGAGAAGCCGAATGAGTGGAGCCAATGGATACACTGTGCAGAATACTGGTACAATACCACCTATCATAGCTCCATAGGAATTACCCCCTTCCAAGCAGTATATGAAAGGATCGGAGAAGTGGCGTATAGGCTAGAGCTTCCCAGTTCAGCAGCTATCCACCCTGTTTTTCATGTATCGCAACTGAAGAAGGCCATGGGGAATGGAGAATCGGTTCAGCCATTGGACCCTTATGTGAATGAGAATCACGAGTGGATCACACAACCTGAAGAAGTATACAGTTATCGCAAGAGTGGGAAGCATTGA

Coding sequence (CDS)

ATGCCTTTGGAGATCCCTGACGCGATATGGAGTGATATCTCCATGGATTTCATCGAAGGACTACCCAAGTCCAAAGGATGGGATGTGATACTAGTGGTAGTTGACCGGCTAAGTAAGTATGCACACTTTCTACTACTAAAACACCCCTATACAGCCAAAGTCGTGGCCGAAACGTTTGTTAAGGAAGTGGTAAAGCTCCTCGGATGCCCCAGATCGATAGTTTCTGATAGGGACAAGGTTTTCCTTAGCCATTTCTGGAAAGAAATGTTCCGTTTAGCCGGAACCAAGCTGAATCGAAGCTCATCTTACCATCCTCAATTGGATAGGCAGACCGAGGTAGTGAAGAAGAGTGCAAAAACCTACTTGAGATGCTTCTGTGGGGAGAAGCCGAATGAGTGGAGCCAATGGATACACTGTGCAGAATACTGGTACAATACCACCTATCATAGCTCCATAGGAATTACCCCCTTCCAAGCAGTATATGAAAGGATCGGAGAAGTGGCGTATAGGCTAGAGCTTCCCAGTTCAGCAGCTATCCACCCTGTTTTTCATGTATCGCAACTGAAGAAGGCCATGGGGAATGGAGAATCGGTTCAGCCATTGGACCCTTATGTGAATGAGAATCACGAGTGGATCACACAACCTGAAGAAGTATACAGTTATCGCAAGAGTGGGAAGCATTGA

Protein sequence

MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFVKEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKTYLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERIGEVAYRLELPSSAAIHPVFHVSQLKKAMGNGESVQPLDPYVNENHEWITQPEEVYSYRKSGKH

Homology

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BLAST of MELO.jh101030.1 vs. NCBI nr
Match: KAA0066243.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYJ97678.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 380 bits (976), Expect = 3.39e-129
Identity = 197/319 (61.76%), Postives = 213/319 (66.77%), Query Frame = 0


Query: 1   MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
           MPLEIPDAIWSDISMDFIEGLPKSKGWDVI VVVDRLSKY HFLLLKHP++AK+VAETFV
Sbjct: 30  MPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFV 89

Query: 61  KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
           KEVV+L G PRSIVSDRDKVFLSHFWKE+FRLAGTKLNRSSSYHPQLD QTEVV KS +T
Sbjct: 90  KEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQLDGQTEVVNKSVET 149

Query: 121 YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVY------------------- 180
           YLRCFCGEKPNEWSQW+H AEYWYNTTYHSSIGITPFQAVY                   
Sbjct: 150 YLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNAT 209

Query: 181 ------------------------------------------------------------ 224
                                                                       
Sbjct: 210 LDQQLKDRDITLGALKEHLKLAQERMKKHADNKRREVEFQEGDLVFLKLCPYRQTSLIKK 269

[Close]

BLAST of MELO.jh101030.1 vs. NCBI nr
Match: TYK05078.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 383 bits (984), Expect = 4.65e-123
Identity = 191/282 (67.73%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
           MPLEIPDAIWSDISMDFIEGLPKSKGWDVI VVVDRLSKY HFLLLKHP++AK+VAETFV
Sbjct: 661 MPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFV 720

Query: 61  KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
           KEVV+L G PRSIVSDRDKVFLSHFW+E+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 721 KEVVRLHGYPRSIVSDRDKVFLSHFWRELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIET 780

Query: 121 YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERI---------------- 180
           YLRCFCGEKPNEWSQW+H AEYWYNTTYHSSIGITPFQAVY R+                
Sbjct: 781 YLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNST 840

Query: 181 -----------------------------------------GE-VAYRLELPSSAAIHPV 224
                                                    G+ VAY++ELP++AAIHPV
Sbjct: 841 LDQQLKDRDITLGALKEHLKLAQERMKKHADNKRREVEFQEGDLVAYKIELPAAAAIHPV 900

[Close]

BLAST of MELO.jh101030.1 vs. NCBI nr
Match: KAA0047079.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 383 bits (984), Expect = 4.65e-123
Identity = 191/282 (67.73%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
           MPLEIPDAIWSDISMDFIEGLPKSKGWDVI VVVDRLSKY HFLLLKHP++AK+VAETFV
Sbjct: 661 MPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFV 720

Query: 61  KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
           KEVV+L G PRSIVSDRDKVFLSHFW+E+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 721 KEVVRLHGYPRSIVSDRDKVFLSHFWRELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIET 780

Query: 121 YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERI---------------- 180
           YLRCFCGEKPNEWSQW+H AEYWYNTTYHSSIGITPFQAVY R+                
Sbjct: 781 YLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNST 840

Query: 181 -----------------------------------------GE-VAYRLELPSSAAIHPV 224
                                                    G+ VAY++ELP++AAIHPV
Sbjct: 841 LDQQLKDRDITLGALKEHLKLAQERMKKHADNKRREVEFQEGDLVAYKIELPAAAAIHPV 900

[Close]

BLAST of MELO.jh101030.1 vs. NCBI nr
Match: KAA0025139.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK23099.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 382 bits (982), Expect = 6.73e-120
Identity = 196/319 (61.44%), Postives = 212/319 (66.46%), Query Frame = 0


Query: 1    MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
            MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKY HFLLLKHP+TAK+VAETFV
Sbjct: 1130 MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFV 1189

Query: 61   KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
            +EV++L GCPRSIVSDRDKVFLSHFWKE+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 1190 REVIRLHGCPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSVET 1249

Query: 121  YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVY------------------- 180
            YLRCFCGE+P+EWSQWIH AEYWYNTTYH SIGITPFQAVY                   
Sbjct: 1250 YLRCFCGERPHEWSQWIHWAEYWYNTTYHGSIGITPFQAVYGRLPPPLVYYGDMETPNST 1309

Query: 181  ------------------------------------------------------------ 224
                                                                        
Sbjct: 1310 LDQHLKDRDVALGALKEHLKLAQERMKKQADTKRREVEFQEGDFVFLKLRPYRQVSLRKK 1369

[Close]

BLAST of MELO.jh101030.1 vs. NCBI nr
Match: KAA0052373.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK09415.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (985), Expect = 4.46e-119
Identity = 198/319 (62.07%), Postives = 214/319 (67.08%), Query Frame = 0


Query: 1    MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
            MPLEIPDAIWSDISMDFIEGLPKS+GWDVILVVVDRLSKY HFLLLKHP+TAK+VAETFV
Sbjct: 1593 MPLEIPDAIWSDISMDFIEGLPKSEGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFV 1652

Query: 61   KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
            KEV++L G PRSIVSDRDKVFLSHFWKE+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 1653 KEVIRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSVET 1712

Query: 121  YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVY------------------- 180
            YLRCFCGE+P+EWSQWIH A+YWYNTTYHSSIGITPFQAVY                   
Sbjct: 1713 YLRCFCGERPHEWSQWIHWAKYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNST 1772

Query: 181  ------------------------------------------------------------ 224
                                                                        
Sbjct: 1773 LNQQLKDRDVALGALKEHLKLAQERMKKQADTKRREVEFQEGDFVFLKLRPYRQVSLRKK 1832

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 2    PLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFVK 61
            P+   +  W  +SMDFI  LP+S G++ + VVVDR SK A  +      TA+  A  F +
Sbjct: 976  PIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035

Query: 62   EVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKTY 121
             V+   G P+ I++D D +F S  WK+        +  S  Y PQ D QTE   ++ +  
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKL 1095

Query: 122  LRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERIGEVAYRLELPS 176
            LRC C   PN W   I   +  YN   HS+  +TPF+ V+ R       LELPS
Sbjct: 1096 LRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-RYSPALSPLELPS 1148

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 2    PLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFVK 61
            P+   +  W  +SMDFI  LP+S G++ + VVVDR SK A  +      TA+  A  F +
Sbjct: 976  PIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035

Query: 62   EVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKTY 121
             V+   G P+ I++D D +F S  WK+        +  S  Y PQ D QTE   ++ +  
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKL 1095

Query: 122  LRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERIGEVAYRLELPS 176
            LRC C   PN W   I   +  YN   HS+  +TPF+ V+ R       LELPS
Sbjct: 1096 LRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-RYSPALSPLELPS 1148

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 2    PLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFVK 61
            P+   +  W  +SMDFI  LP+S G++ + VVVDR SK A  +      TA+  A  F +
Sbjct: 976  PIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035

Query: 62   EVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKTY 121
             V+   G P+ I++D D +F S  WK+        +  S  Y PQ D QTE   ++ +  
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKL 1095

Query: 122  LRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERIGEVAYRLELPS 176
            LRC C   PN W   I   +  YN   HS+  +TPF+ V+ R       LELPS
Sbjct: 1096 LRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-RYSPALSPLELPS 1148

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 2    PLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFVK 61
            P+   +  W  +SMDFI  LP+S G++ + VVVDR SK A  +      TA+  A  F +
Sbjct: 976  PIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035

Query: 62   EVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKTY 121
             V+   G P+ I++D D +F S  WK+        +  S  Y PQ D QTE   ++ +  
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKL 1095

Query: 122  LRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERIGEVAYRLELPS 176
            LRC C   PN W   I   +  YN   HS+  +TPF+ V+ R       LELPS
Sbjct: 1096 LRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-RYSPALSPLELPS 1148

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 2    PLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFVK 61
            P+   +  W  +SMDFI  LP+S G++ + VVVDR SK A  +      TA+  A  F +
Sbjct: 976  PIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035

Query: 62   EVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKTY 121
             V+   G P+ I++D D +F S  WK+        +  S  Y PQ D QTE   ++ +  
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKL 1095

Query: 122  LRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERIGEVAYRLELPS 176
            LRC C   PN W   I   +  YN   HS+  +TPF+ V+ R       LELPS
Sbjct: 1096 LRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-RYSPALSPLELPS 1148

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL
Match: A0A5D3BHL8 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 380 bits (976), Expect = 1.64e-129
Identity = 197/319 (61.76%), Postives = 213/319 (66.77%), Query Frame = 0


Query: 1   MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
           MPLEIPDAIWSDISMDFIEGLPKSKGWDVI VVVDRLSKY HFLLLKHP++AK+VAETFV
Sbjct: 30  MPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFV 89

Query: 61  KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
           KEVV+L G PRSIVSDRDKVFLSHFWKE+FRLAGTKLNRSSSYHPQLD QTEVV KS +T
Sbjct: 90  KEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQLDGQTEVVNKSVET 149

Query: 121 YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVY------------------- 180
           YLRCFCGEKPNEWSQW+H AEYWYNTTYHSSIGITPFQAVY                   
Sbjct: 150 YLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNAT 209

Query: 181 ------------------------------------------------------------ 224
                                                                       
Sbjct: 210 LDQQLKDRDITLGALKEHLKLAQERMKKHADNKRREVEFQEGDLVFLKLCPYRQTSLIKK 269

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL
Match: A0A5A7U0S0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00370 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 2.25e-123
Identity = 191/282 (67.73%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
           MPLEIPDAIWSDISMDFIEGLPKSKGWDVI VVVDRLSKY HFLLLKHP++AK+VAETFV
Sbjct: 661 MPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFV 720

Query: 61  KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
           KEVV+L G PRSIVSDRDKVFLSHFW+E+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 721 KEVVRLHGYPRSIVSDRDKVFLSHFWRELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIET 780

Query: 121 YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERI---------------- 180
           YLRCFCGEKPNEWSQW+H AEYWYNTTYHSSIGITPFQAVY R+                
Sbjct: 781 YLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNST 840

Query: 181 -----------------------------------------GE-VAYRLELPSSAAIHPV 224
                                                    G+ VAY++ELP++AAIHPV
Sbjct: 841 LDQQLKDRDITLGALKEHLKLAQERMKKHADNKRREVEFQEGDLVAYKIELPAAAAIHPV 900

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL
Match: A0A5D3C1D4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00530 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 2.25e-123
Identity = 191/282 (67.73%), Postives = 211/282 (74.82%), Query Frame = 0


Query: 1   MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
           MPLEIPDAIWSDISMDFIEGLPKSKGWDVI VVVDRLSKY HFLLLKHP++AK+VAETFV
Sbjct: 661 MPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFV 720

Query: 61  KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
           KEVV+L G PRSIVSDRDKVFLSHFW+E+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 721 KEVVRLHGYPRSIVSDRDKVFLSHFWRELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIET 780

Query: 121 YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVYERI---------------- 180
           YLRCFCGEKPNEWSQW+H AEYWYNTTYHSSIGITPFQAVY R+                
Sbjct: 781 YLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNST 840

Query: 181 -----------------------------------------GE-VAYRLELPSSAAIHPV 224
                                                    G+ VAY++ELP++AAIHPV
Sbjct: 841 LDQQLKDRDITLGALKEHLKLAQERMKKHADNKRREVEFQEGDLVAYKIELPAAAAIHPV 900

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL
Match: A0A5D3DIM6 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00810 PE=4 SV=1)

HSP 1 Score: 382 bits (982), Expect = 3.26e-120
Identity = 196/319 (61.44%), Postives = 212/319 (66.46%), Query Frame = 0


Query: 1    MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
            MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKY HFLLLKHP+TAK+VAETFV
Sbjct: 1130 MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFV 1189

Query: 61   KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
            +EV++L GCPRSIVSDRDKVFLSHFWKE+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 1190 REVIRLHGCPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSVET 1249

Query: 121  YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVY------------------- 180
            YLRCFCGE+P+EWSQWIH AEYWYNTTYH SIGITPFQAVY                   
Sbjct: 1250 YLRCFCGERPHEWSQWIHWAEYWYNTTYHGSIGITPFQAVYGRLPPPLVYYGDMETPNST 1309

Query: 181  ------------------------------------------------------------ 224
                                                                        
Sbjct: 1310 LDQHLKDRDVALGALKEHLKLAQERMKKQADTKRREVEFQEGDFVFLKLRPYRQVSLRKK 1369

[Close]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL
Match: A0A5D3CD19 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00470 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 2.16e-119
Identity = 198/319 (62.07%), Postives = 214/319 (67.08%), Query Frame = 0


Query: 1    MPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYAHFLLLKHPYTAKVVAETFV 60
            MPLEIPDAIWSDISMDFIEGLPKS+GWDVILVVVDRLSKY HFLLLKHP+TAK+VAETFV
Sbjct: 1593 MPLEIPDAIWSDISMDFIEGLPKSEGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFV 1652

Query: 61   KEVVKLLGCPRSIVSDRDKVFLSHFWKEMFRLAGTKLNRSSSYHPQLDRQTEVVKKSAKT 120
            KEV++L G PRSIVSDRDKVFLSHFWKE+FRLAGTKLNRSSSYHPQ D QTEVV KS +T
Sbjct: 1653 KEVIRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSVET 1712

Query: 121  YLRCFCGEKPNEWSQWIHCAEYWYNTTYHSSIGITPFQAVY------------------- 180
            YLRCFCGE+P+EWSQWIH A+YWYNTTYHSSIGITPFQAVY                   
Sbjct: 1713 YLRCFCGERPHEWSQWIHWAKYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNST 1772

Query: 181  ------------------------------------------------------------ 224
                                                                        
Sbjct: 1773 LNQQLKDRDVALGALKEHLKLAQERMKKQADTKRREVEFQEGDFVFLKLRPYRQVSLRKK 1832

The following BLAST results are available for this feature:

BLAST of MELO.jh101030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066243.1	3.39e-129	61.76	putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYJ97678.1 put...	[more]
TYK05078.1	4.65e-123	67.73	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047079.1	4.65e-123	67.73	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0025139.1	6.73e-120	61.44	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK23099.1 Tran...	[more]
KAA0052373.1	4.46e-119	62.07	peroxidase 64 [Cucumis melo var. makuwa] >TYK09415.1 peroxidase 64 [Cucumis melo...	[more]

BLAST of MELO.jh101030.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.4e-26	36.21	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.4e-26	36.21	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.4e-26	36.21	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.4e-26	36.21	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.4e-26	36.21	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHL8	1.64e-129	61.76	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7U0S0	2.25e-123	67.73	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C1D4	2.25e-123	67.73	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DIM6	3.26e-120	61.44	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CD19	2.16e-119	62.07	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00470 ...	[more]

BLAST of MELO.jh101030.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 13..105 e-value: 7.4E-9 score: 35.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..164 score: 17.47477
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..187 e-value: 4.5E-47 score: 161.9
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 1..158
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101030.1.t1	MELO.jh101030.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding