MELO.jh101012.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101012.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr01: 17917860 .. 17918564 (+)
RNA-Seq Expression	MELO.jh101012.1
Synteny	MELO.jh101012.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGATCATGAGATCAAGTTGGTGCCAGGGGCAAAACCGCCTACTAAGAATGCTTATCGTATGGCACCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACAGAATGCAAGGTTCATTAGGCTTTCAAAAGCTCCATATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGAGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCTCACGGTTCGCAACAAGTATCCACTTCTCATAATTACTAACTTGTTCGATAGCTTACATGGGGAGAAGTATTTTTCAAAGTTAGACTTGCGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACTTGTGTCACCCGATATGGTTCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATCGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTTTTTTGCACAAGAGCAGATAAACTTCTTGGGCCATGTGATAGAGGGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGA

mRNA sequence

ATGATTGATCATGAGATCAAGTTGGTGCCAGGGGCAAAACCGCCTACTAAGAATGCTTATCGTATGGCACCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACAGAATGCAAGGTTCATTAGGCTTTCAAAAGCTCCATATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGAGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCTCACGGTTCGCAACAAGTATCCACTTCTCATAATTACTAACTTGTTCGATAGCTTACATGGGGAGAAGTATTTTTCAAAGTTAGACTTGCGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACTTGTGTCACCCGATATGGTTCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATCGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTTTTTTGCACAAGAGCAGATAAACTTCTTGGGCCATGTGATAGAGGGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGA

Coding sequence (CDS)

ATGATTGATCATGAGATCAAGTTGGTGCCAGGGGCAAAACCGCCTACTAAGAATGCTTATCGTATGGCACCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACAGAATGCAAGGTTCATTAGGCTTTCAAAAGCTCCATATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGAGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAGCTCACGGTTCGCAACAAGTATCCACTTCTCATAATTACTAACTTGTTCGATAGCTTACATGGGGAGAAGTATTTTTCAAAGTTAGACTTGCGATCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACTTGTGTCACCCGATATGGTTCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATCGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTTTTTTGCACAAGAGCAGATAAACTTCTTGGGCCATGTGATAGAGGGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGA

Protein sequence

MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD

Homology

[Close]

BLAST of MELO.jh101012.1 vs. NCBI nr
Match: TYK01762.1 (uncharacterized protein E5676_scaffold1323G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 453 bits (1166), Expect = 5.01e-158
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 12  AKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYR 71
           AKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYR
Sbjct: 173 AKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYR 232

Query: 72  VLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSF 131
           VLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSF
Sbjct: 233 VLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSF 292

Query: 132 EFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKS 191
           EFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKS
Sbjct: 293 EFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKS 352

Query: 192 KENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           KENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD
Sbjct: 353 KENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 395

[Close]

BLAST of MELO.jh101012.1 vs. NCBI nr
Match: KAA0036157.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 432 bits (1112), Expect = 1.28e-152
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 22  MAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNK 81
           MAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNK
Sbjct: 1   MAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNK 60

Query: 82  YPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLT 141
           YPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLT
Sbjct: 61  YPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLT 120

Query: 142 NAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKRE 201
           NAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKRE
Sbjct: 121 NAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKRE 180

Query: 202 KCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           KCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD
Sbjct: 181 KCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 213

[Close]

BLAST of MELO.jh101012.1 vs. NCBI nr
Match: TYK28653.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 434 bits (1117), Expect = 4.68e-151
Identity = 215/234 (91.88%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKK 60
           MIDHEI+LVPGAKPP KNAYRMAPPELAELRKQLDEL NA FIR +KAPYGAPVLFQKKK
Sbjct: 109 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 168

Query: 61  DESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEP 120
           D SLRLCIDYR LNKLTVRNKYPL IIT+LFD LHG KYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 169 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 228

Query: 121 KTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYG+FEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 229 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 288

Query: 181 RDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           RDHLQKVFQK KENQLYVKREKC FAQE+I FLGHVIE GRIGMEEG+IAAIRD
Sbjct: 289 RDHLQKVFQKLKENQLYVKREKCSFAQERIKFLGHVIECGRIGMEEGEIAAIRD 342

[Close]

BLAST of MELO.jh101012.1 vs. NCBI nr
Match: KAA0051360.1 (uncharacterized protein E6C27_scaffold55G00840 [Cucumis melo var. makuwa])

HSP 1 Score: 433 bits (1113), Expect = 5.22e-148
Identity = 214/234 (91.45%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKK 60
           MIDHEI+LVPGAKPP KNAYRMAPPELAELRK LDEL NA FIR +KAPY APVLFQ+KK
Sbjct: 100 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKHLDELLNAGFIRPAKAPYEAPVLFQRKK 159

Query: 61  DESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEP 120
           D SLRLCIDYR LNKLTVRNKYPLLIIT+LFD LHG KYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 160 DGSLRLCIDYRALNKLTVRNKYPLLIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 219

Query: 121 KTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYG+FEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 220 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 279

Query: 181 RDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           RDHLQKVFQK KENQLYVKREKC FAQE+INFLGHVIE GRIGMEEGKIAAI D
Sbjct: 280 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIHD 333

[Close]

BLAST of MELO.jh101012.1 vs. NCBI nr
Match: KAA0057285.1 (uncharacterized protein E6C27_scaffold280G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 429 bits (1104), Expect = 7.62e-148
Identity = 213/234 (91.03%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKK 60
           MIDHEI+LVPGAK P KNAYRMA PELAELRKQLDEL NA FIR +KAPYGAPVLFQ+KK
Sbjct: 109 MIDHEIELVPGAKSPAKNAYRMALPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 168

Query: 61  DESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEP 120
           D SLRLCIDYR LNKLTVRNKYPL IIT+LFD LHG KYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 169 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 228

Query: 121 KTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYG+FEFLVMPFGLTNAPATFCT+MNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 229 KTTCVTRYGAFEFLVMPFGLTNAPATFCTMMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 288

Query: 181 RDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           RDHLQKVFQK KENQLYVKREKC FAQE+INFLGHVIE GRIGMEEGKIAAIRD
Sbjct: 289 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRD 342

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 186.4 bits (472), Expect = 3.6e-46
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 2   IDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKD 61
           + H+I++ PGA+ P    Y +      E+ K + +L + +FI  SK+P  +PV+   KKD
Sbjct: 584 VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD 643

Query: 62  ESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPK 121
            + RLC+DYR LNK T+ + +PL  I NL   +   + F+ LDL SGY+Q+ +   D  K
Sbjct: 644 GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 703

Query: 122 TTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHR 181
           T  VT  G +E+ VMPFGL NAP+TF   M   F +   +FV VYLDDI+++S + EEH 
Sbjct: 704 TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHW 763

Query: 182 DHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 235
            HL  V ++ K   L VK++KC FA E+  FLG+ I   +I   + K AAIRD
Sbjct: 764 KHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRD 814

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 3.6e-46
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 2   IDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKD 61
           + H+I++ PGA+ P    Y +      E+ K + +L + +FI  SK+P  +PV+   KKD
Sbjct: 610 VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD 669

Query: 62  ESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPK 121
            + RLC+DYR LNK T+ + +PL  I NL   +   + F+ LDL SGY+Q+ +   D  K
Sbjct: 670 GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 729

Query: 122 TTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHR 181
           T  VT  G +E+ VMPFGL NAP+TF   M   F +   +FV VYLDDI+++S + EEH 
Sbjct: 730 TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHW 789

Query: 182 DHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 235
            HL  V ++ K   L VK++KC FA E+  FLG+ I   +I   + K AAIRD
Sbjct: 790 KHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRD 840

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.0e-45
Identity = 91/134 (67.91%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 63  SLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKT 122
           SLR+CIDYR L K+T++NKYP+  + +LFD L    +F+KLDLRSGY+QVRIA+GDEPKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 123 TCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVV---YSTTMEE 182
           TCVTRYGSFEF VMPFGLTNA ATFC LMN V +EYLD FVVVYLDD+VV   YS ++ E
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHE 124

Query: 183 HRDHLQKVFQKSKE 194
           H  HL +V ++SKE
Sbjct: 125 HIKHL-RVVRESKE 137

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-36
Identity = 83/224 (37.05%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 14  PPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPV-LFQKKKDES----LRLCI 73
           P     Y +A     E+  Q+ E+ N   IR S +PY +P  +  KK D S     R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 74  DYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY 133
           DYR LN++T+ ++YP+  +  +   L   +YF+ +DL  G++Q+ + E    KT   T+ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 134 GSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVF 193
           G +E+L MPFGL NAPATF   MN +    L+K  +VYLDDI+++ST++ EH + +Q VF
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 194 QKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAI 233
            K  +  L ++ +KC F +++ NFLGH++    I     K+ AI
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAI 429

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.9e-36
Identity = 80/210 (38.10%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 29  ELRKQLDELQNARFIRLSKAPYGAPV-LFQKKKDES----LRLCIDYRVLNKLTVRNKYP 88
           E+  Q+ ++ N   IR S +PY +P+ +  KK+D S     R+ IDYR LN++TV +++P
Sbjct: 222 EVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHP 281

Query: 89  LLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLTNA 148
           +  +  +   L    YF+ +DL  G++Q+ +      KT   T++G +E+L MPFGL NA
Sbjct: 282 IPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNA 341

Query: 149 PATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKREKC 208
           PATF   MN +    L+K  +VYLDDI+V+ST+++EH   L  VF+K  +  L ++ +KC
Sbjct: 342 PATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKC 401

Query: 209 FFAQEQINFLGHVIEGGRIGMEEGKIAAIR 234
            F +++  FLGHV+    I     KI AI+
Sbjct: 402 EFLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL
Match: A0A5D3BSI5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1323G00050 PE=4 SV=1)

HSP 1 Score: 453 bits (1166), Expect = 2.43e-158
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 12  AKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYR 71
           AKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYR
Sbjct: 173 AKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYR 232

Query: 72  VLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSF 131
           VLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSF
Sbjct: 233 VLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSF 292

Query: 132 EFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKS 191
           EFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKS
Sbjct: 293 EFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKS 352

Query: 192 KENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           KENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD
Sbjct: 353 KENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 395

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL
Match: A0A5A7T3I3 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00130 PE=4 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 6.18e-153
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 22  MAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNK 81
           MAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNK
Sbjct: 1   MAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKKDESLRLCIDYRVLNKLTVRNK 60

Query: 82  YPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLT 141
           YPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLT
Sbjct: 61  YPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGSFEFLVMPFGLT 120

Query: 142 NAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKRE 201
           NAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKRE
Sbjct: 121 NAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKSKENQLYVKRE 180

Query: 202 KCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           KCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD
Sbjct: 181 KCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 213

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL
Match: A0A5D3DY42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00110 PE=4 SV=1)

HSP 1 Score: 434 bits (1117), Expect = 2.27e-151
Identity = 215/234 (91.88%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKK 60
           MIDHEI+LVPGAKPP KNAYRMAPPELAELRKQLDEL NA FIR +KAPYGAPVLFQKKK
Sbjct: 109 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 168

Query: 61  DESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEP 120
           D SLRLCIDYR LNKLTVRNKYPL IIT+LFD LHG KYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 169 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 228

Query: 121 KTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYG+FEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 229 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 288

Query: 181 RDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           RDHLQKVFQK KENQLYVKREKC FAQE+I FLGHVIE GRIGMEEG+IAAIRD
Sbjct: 289 RDHLQKVFQKLKENQLYVKREKCSFAQERIKFLGHVIECGRIGMEEGEIAAIRD 342

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL
Match: A0A5A7U864 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00840 PE=4 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 2.53e-148
Identity = 214/234 (91.45%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKK 60
           MIDHEI+LVPGAKPP KNAYRMAPPELAELRK LDEL NA FIR +KAPY APVLFQ+KK
Sbjct: 100 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKHLDELLNAGFIRPAKAPYEAPVLFQRKK 159

Query: 61  DESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEP 120
           D SLRLCIDYR LNKLTVRNKYPLLIIT+LFD LHG KYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 160 DGSLRLCIDYRALNKLTVRNKYPLLIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 219

Query: 121 KTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYG+FEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 220 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 279

Query: 181 RDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           RDHLQKVFQK KENQLYVKREKC FAQE+INFLGHVIE GRIGMEEGKIAAI D
Sbjct: 280 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIHD 333

[Close]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL
Match: A0A5A7UUR0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G001260 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 3.69e-148
Identity = 213/234 (91.03%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MIDHEIKLVPGAKPPTKNAYRMAPPELAELRKQLDELQNARFIRLSKAPYGAPVLFQKKK 60
           MIDHEI+LVPGAK P KNAYRMA PELAELRKQLDEL NA FIR +KAPYGAPVLFQ+KK
Sbjct: 109 MIDHEIELVPGAKSPAKNAYRMALPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 168

Query: 61  DESLRLCIDYRVLNKLTVRNKYPLLIITNLFDSLHGEKYFSKLDLRSGYYQVRIAEGDEP 120
           D SLRLCIDYR LNKLTVRNKYPL IIT+LFD LHG KYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 169 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 228

Query: 121 KTTCVTRYGSFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYG+FEFLVMPFGLTNAPATFCT+MNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 229 KTTCVTRYGAFEFLVMPFGLTNAPATFCTMMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 288

Query: 181 RDHLQKVFQKSKENQLYVKREKCFFAQEQINFLGHVIEGGRIGMEEGKIAAIRD 234
           RDHLQKVFQK KENQLYVKREKC FAQE+INFLGHVIE GRIGMEEGKIAAIRD
Sbjct: 289 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRD 342

The following BLAST results are available for this feature:

BLAST of MELO.jh101012.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01762.1	5.01e-158	100.00	uncharacterized protein E5676_scaffold1323G00050 [Cucumis melo var. makuwa]	[more]
KAA0036157.1	1.28e-152	100.00	RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]	[more]
TYK28653.1	4.68e-151	91.88	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0051360.1	5.22e-148	91.45	uncharacterized protein E6C27_scaffold55G00840 [Cucumis melo var. makuwa]	[more]
KAA0057285.1	7.62e-148	91.03	uncharacterized protein E6C27_scaffold280G001260 [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101012.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.6e-46	42.06	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.6e-46	42.06	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P31843	4.0e-45	67.91	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
P20825	2.6e-36	37.05	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	9.9e-36	38.10	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSI5	2.43e-158	100.00	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7T3I3	6.18e-153	100.00	RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DY42	2.27e-151	91.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A5A7U864	2.53e-148	91.45	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UUR0	3.69e-148	91.03	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of MELO.jh101012.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..142 e-value: 2.7E-85 score: 287.0
None	No IPR available	PANTHER	PTHR24559:SF363	SUBFAMILY NOT NAMED	coord: 2..228
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..228
None	No IPR available	CDD	cd01647	RT_LTR	coord: 42..217 e-value: 1.46414E-87 score: 254.827
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 82..217 e-value: 2.7E-85 score: 287.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 58..216 e-value: 1.4E-29 score: 103.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 38..217 score: 16.583242
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101012.1.t1	MELO.jh101012.1.t1	mRNA