MELO.jh101006.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101006.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr01: 16767207 .. 16768544 (-)
RNA-Seq Expression	MELO.jh101006.1
Synteny	MELO.jh101006.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGATGAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTTAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCCAATATAGACTGTTATGGCAAGGAAGTTGTTTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGTATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCCAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCCTCCGAACCCGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCCCCAGAGAGGTAG

mRNA sequence

ATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGATGAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTTAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCCAATATAGACTGTTATGGCAAGGAAGTTGTTTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGTATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCCAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCCTCCGAACCCGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCCCCAGAGAGGTAG

Coding sequence (CDS)

ATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGATGAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTTAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCCAATATAGACTGTTATGGCAAGGAAGTTGTTTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGTATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCCAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCCTCCGAACCCGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCCCCAGAGAGGTAG

Protein sequence

MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPER

Homology

[Close]

BLAST of MELO.jh101006.1 vs. NCBI nr
Match: KAA0053272.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 870 bits (2249), Expect = 1.69e-312
Identity = 437/445 (98.20%), Postives = 442/445 (99.33%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 134 MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 193

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 194 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 253

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPERAD+SKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHR+E
Sbjct: 254 THADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRQE 313

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTAD+CPRKPFETTPPQPSAA
Sbjct: 314 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPRKPFETTPPQPSAA 373

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 374 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 433

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 434 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 493

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           C+GKEVVFNPPSEASFKFR AGMVCIPKVISAMKASKLLSQGTWGILASVVD+REPEVSL
Sbjct: 494 CFGKEVVFNPPSEASFKFRWAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSL 553

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 554 SSEPVVREYPDVFPDELPGLPPPRE 578

[Close]

BLAST of MELO.jh101006.1 vs. NCBI nr
Match: KAA0046571.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 870 bits (2249), Expect = 1.32e-310
Identity = 436/445 (97.98%), Postives = 441/445 (99.10%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 134 MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 193

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 194 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 253

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPER D+SKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE
Sbjct: 254 THADALRIALDLSLPERVDSSKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 313

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTAD+CPRKPFETTPPQPSAA
Sbjct: 314 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPRKPFETTPPQPSAA 373

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVF TT+QEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 374 QQGRVFTTTQQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 433

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 434 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 493

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           C+GKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVD+REPEVSL
Sbjct: 494 CFGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSL 553

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 554 SSEPVVREYPDVFPDELPGLPPPRE 578

[Close]

BLAST of MELO.jh101006.1 vs. NCBI nr
Match: KAA0040651.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 851 bits (2199), Expect = 8.36e-309
Identity = 427/438 (97.49%), Postives = 434/438 (99.09%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 134 MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 193

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 194 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 253

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPER D+SKAAGRGSALGQKRKVETQPDV PQRTLRSGGVFQRHRRE
Sbjct: 254 THADALRIALDLSLPERDDSSKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRHRRE 313

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAA+GRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQ GHTAD+CPRKPFETTPPQPSA+
Sbjct: 314 LAASGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQSGHTADVCPRKPFETTPPQPSAS 373

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRV+ATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 374 QQGRVYATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 433

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 434 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 493

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           C+GKEVVFNPPS ASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVD+REPEVSL
Sbjct: 494 CFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSL 553

Query: 421 SSEPVVREYPDVFPDELP 438
           SSEPVVREYPDVFPDELP
Sbjct: 554 SSEPVVREYPDVFPDELP 571

[Close]

BLAST of MELO.jh101006.1 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 880 bits (2273), Expect = 5.48e-307
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 89  MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 148

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 149 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 208

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE
Sbjct: 209 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 268

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA
Sbjct: 269 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 328

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 329 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 388

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 389 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 448

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL
Sbjct: 449 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 508

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 509 SSEPVVREYPDVFPDELPGLPPPRE 533

[Close]

BLAST of MELO.jh101006.1 vs. NCBI nr
Match: TYK06888.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 880 bits (2273), Expect = 5.48e-307
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 89  MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 148

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 149 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 208

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE
Sbjct: 209 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 268

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA
Sbjct: 269 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 328

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 329 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 388

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 389 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 448

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL
Sbjct: 449 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 508

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 509 SSEPVVREYPDVFPDELPGLPPPRE 533

[Close]

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL
Match: A0A5A7UC03 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00700 PE=4 SV=1)

HSP 1 Score: 870 bits (2249), Expect = 8.17e-313
Identity = 437/445 (98.20%), Postives = 442/445 (99.33%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 134 MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 193

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 194 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 253

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPERAD+SKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHR+E
Sbjct: 254 THADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRQE 313

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTAD+CPRKPFETTPPQPSAA
Sbjct: 314 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPRKPFETTPPQPSAA 373

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 374 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 433

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 434 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 493

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           C+GKEVVFNPPSEASFKFR AGMVCIPKVISAMKASKLLSQGTWGILASVVD+REPEVSL
Sbjct: 494 CFGKEVVFNPPSEASFKFRWAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSL 553

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 554 SSEPVVREYPDVFPDELPGLPPPRE 578

[Close]

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL
Match: A0A5A7TZ22 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00990 PE=4 SV=1)

HSP 1 Score: 870 bits (2249), Expect = 6.39e-311
Identity = 436/445 (97.98%), Postives = 441/445 (99.10%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 134 MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 193

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 194 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 253

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPER D+SKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE
Sbjct: 254 THADALRIALDLSLPERVDSSKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 313

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTAD+CPRKPFETTPPQPSAA
Sbjct: 314 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPRKPFETTPPQPSAA 373

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVF TT+QEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 374 QQGRVFTTTQQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 433

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 434 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 493

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           C+GKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVD+REPEVSL
Sbjct: 494 CFGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSL 553

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 554 SSEPVVREYPDVFPDELPGLPPPRE 578

[Close]

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL
Match: A0A5A7TG66 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00050 PE=4 SV=1)

HSP 1 Score: 851 bits (2199), Expect = 4.05e-309
Identity = 427/438 (97.49%), Postives = 434/438 (99.09%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 134 MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 193

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 194 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 253

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPER D+SKAAGRGSALGQKRKVETQPDV PQRTLRSGGVFQRHRRE
Sbjct: 254 THADALRIALDLSLPERDDSSKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRHRRE 313

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAA+GRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQ GHTAD+CPRKPFETTPPQPSA+
Sbjct: 314 LAASGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQSGHTADVCPRKPFETTPPQPSAS 373

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRV+ATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 374 QQGRVYATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 433

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 434 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 493

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           C+GKEVVFNPPS ASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVD+REPEVSL
Sbjct: 494 CFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSL 553

Query: 421 SSEPVVREYPDVFPDELP 438
           SSEPVVREYPDVFPDELP
Sbjct: 554 SSEPVVREYPDVFPDELP 571

[Close]

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL
Match: A0A5A7SPM4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001940 PE=4 SV=1)

HSP 1 Score: 880 bits (2273), Expect = 2.65e-307
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 89  MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 148

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 149 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 208

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE
Sbjct: 209 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 268

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA
Sbjct: 269 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 328

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 329 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 388

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 389 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 448

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL
Sbjct: 449 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 508

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 509 SSEPVVREYPDVFPDELPGLPPPRE 533

[Close]

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL
Match: A0A5D3C6W3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001930 PE=4 SV=1)

HSP 1 Score: 880 bits (2273), Expect = 2.65e-307
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 60
           MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK
Sbjct: 89  MKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAK 148

Query: 61  LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 120
           LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA
Sbjct: 149 LQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPA 208

Query: 121 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 180
           THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE
Sbjct: 209 THADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRE 268

Query: 181 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 240
           LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA
Sbjct: 269 LAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAA 328

Query: 241 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 300
           QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG
Sbjct: 329 QQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 388

Query: 301 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 360
           SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID
Sbjct: 389 SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 448

Query: 361 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 420
           CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL
Sbjct: 449 CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 508

Query: 421 SSEPVVREYPDVFPDELPGLPPPER 445
           SSEPVVREYPDVFPDELPGLPPP  
Sbjct: 509 SSEPVVREYPDVFPDELPGLPPPRE 533

The following BLAST results are available for this feature:

BLAST of MELO.jh101006.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053272.1	1.69e-312	98.20	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0046571.1	1.32e-310	97.98	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0040651.1	8.36e-309	97.49	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0031437.1	5.48e-307	99.55	pol protein [Cucumis melo var. makuwa]	[more]
TYK06888.1	5.48e-307	99.55	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101006.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC03	8.17e-313	98.20	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7TZ22	6.39e-311	97.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5A7TG66	4.05e-309	97.49	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7SPM4	2.65e-307	99.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5D3C6W3	2.65e-307	99.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]

BLAST of MELO.jh101006.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 211..227 e-value: 0.0083 score: 24.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 212..227 score: 9.207683
None	No IPR available	PFAM	PF08284	RVP_2	coord: 241..371 e-value: 1.0E-41 score: 141.9
None	No IPR available	GENE3D	4.10.60.10		coord: 207..252 e-value: 5.0E-5 score: 25.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..163
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 261..442
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 261..442
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 288..352 e-value: 3.59905E-11 score: 57.3464
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 263..378 e-value: 1.4E-21 score: 78.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 263..360
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 11..107 e-value: 5.2E-17 score: 61.9
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 273..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101006.1.t1	MELO.jh101006.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding